Clone BO04032 Report

Search the DGRC for BO04032

Clone and Library Details

Library:BO
Tissue Source:D. melanogaster
Created by:Joe Carlson
Date Registered:2004-06-03
Comments:Infusion clones with open reading frames
Original Plate Number:40
Well:32
Vector:pDNR-Dual
Associated Gene/TranscriptUK114-RA
Protein status:BO04032.pep: validated full length
Sequenced Size:448

Clone Sequence Records

BO04032.3prime Sequence

446 bp (445 high quality bases) assembled on 2005-12-01

> BO04032.3prime
ATGGTCTAGAAAGCTTGCTTGCACGGTTTTCGTCTCCACAGATCCGGTCA
AGGCAATGCACTCGATCTCCACCAGAGCATCCATGGGCAGCTTGGCCACC
TGGAAACAGCTGCGGGCCGGGAAATCCTTATTGAACACCCGCTTGTAGAC
CTCATTGACTGCCCCGAAATCGTTGAGATCCTTCAAGAACACTGTGTTCT
TGATGACTTTGTCCACTCCGGAATCGGCCGCCTTTAGAACAGCCTCCAGA
TTCTCCAATGCCTTCTGCGCTTGTTCAGTGGGTCCTCCAGGAACCAGTTT
CATGGTGTCCTTGTCCAGACCCAGACATCCGGACACATACACAGTACGAT
CGGCCACCACAGCCTGGTTGTAGGGAGCCACTGGCTTGGCAGCATTTGCA
GTGCTGATAAGTTTCCTCACAATCGTCGACATGTCGACTGATAACT

BO04032.3prime Blast Records

Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 11:57:15
Subject Length Description Subject Range Query Range Score Percent Strand
CG15261-PA 417 CG15261-RA 1..414 432..19 2070 100 Minus
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-13 05:27:27
Subject Length Description Subject Range Query Range Score Percent Strand
UK114-RB 610 CG15261-RB 106..519 432..19 2070 100 Minus
UK114-RA 553 CG15261-RA 106..519 432..19 2070 100 Minus
Blast to na_all.dmel.RELEASE6 performed 2015-02-13 05:27:26
Subject Length Description Subject Range Query Range Score Percent Strand
2L 23513712 2L 15274620..15274849 138..367 1150 100 Plus
2L 23513712 2L 15274272..15274391 19..138 600 100 Plus
2L 23513712 2L 15274922..15274986 368..432 325 100 Plus
Blast to na_te.dros performed 2015-02-13 05:27:26
Subject Length Description Subject Range Query Range Score Percent Strand
HeT-A 6083 HeT-A DM06920 6083bp Derived from U06920.2 (Rel. 67, Last updated, Version 14). 4064..4091 149..176 104 85.7 Plus

BO04032.3prime Sim4 Records

Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 01:52:56 Download gff for BO04032.3prime
Subject Subject Range Query Range Percent Splice Strand
CG15261-PA 1..417 18..432 99   Minus
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 00:01:12 Download gff for BO04032.3prime
Subject Subject Range Query Range Percent Splice Strand
CG15261-PA 1..417 18..432 99   Minus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-09-01 17:52:40 Download gff for BO04032.3prime
Subject Subject Range Query Range Percent Splice Strand
UK114-RA 93..527 12..444 98   Minus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-13 07:58:46 Download gff for BO04032.3prime
Subject Subject Range Query Range Percent Splice Strand
UK114-RA 93..527 12..444 98   Minus
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-13 07:58:46 Download gff for BO04032.3prime
Subject Subject Range Query Range Percent Splice Strand
2L 15274264..15274390 12..137 97 <- Plus
2L 15274620..15274849 138..367 100 <- Plus
2L 15274922..15274999 368..444 93   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-09-01 17:52:40 Download gff for BO04032.3prime
Subject Subject Range Query Range Percent Splice Strand
arm_2L 15274264..15274390 12..137 97 <- Plus
arm_2L 15274620..15274849 138..367 100 <- Plus
arm_2L 15274922..15274999 368..444 93   Plus

BO04032.5prime Sequence

446 bp (445 high quality bases) assembled on 2005-12-01

> BO04032.5prime
GAAGTTATCAGTCGACATGTCGACGATTGTGAGGAAACTTATCAGCACTG
CAAATGCTGCCAAGCCAGTGGCTCCCTACAACCAGGCTGTGGTGGCCGAT
CGTACTGTGTATGTGTCCGGATGTCTGGGTCTGGACAAGGACACCATGAA
ACTGGTTCCTGGAGGACCCACTGAACAAGCGCAGAAGGCATTGGAGAATC
TGGAGGCTGTTCTAAAGGCGGCCGATTCCGGAGTGGACAAAGTCATCAAG
AACACAGTGTTCTTGAAGGATCTCAACGATTTCGGGGCAGTCAATGAGGT
CTACAAGCGGGTGTTCAATAAGGATTTCCCGGCCCGCAGCTGTTTCCAGG
TGGCCAAGCTGCCCATGGATGCTCTGGTGGAGATCGAGTGCATTGCCTTG
ACCGGATCTGTGGAGACGAAAACCGTGCAAGCAAGCTTTCTAGACC

BO04032.5prime Blast Records

Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 11:57:16
Subject Length Description Subject Range Query Range Score Percent Strand
CG15261-PA 417 CG15261-RA 1..414 17..430 2070 100 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-09 18:31:00
Subject Length Description Subject Range Query Range Score Percent Strand
UK114-RB 610 CG15261-RB 106..519 17..430 2070 100 Plus
UK114-RA 553 CG15261-RA 106..519 17..430 2070 100 Plus
Blast to na_all.dmel.RELEASE6 performed 2015-02-09 18:30:54
Subject Length Description Subject Range Query Range Score Percent Strand
2L 23513712 2L 15274620..15274849 311..82 1150 100 Minus
2L 23513712 2L 15274272..15274391 430..311 600 100 Minus
2L 23513712 2L 15274922..15274986 81..17 325 100 Minus
Blast to na_te.dros performed 2015-02-09 18:30:57
Subject Length Description Subject Range Query Range Score Percent Strand
HeT-A 6083 HeT-A DM06920 6083bp Derived from U06920.2 (Rel. 67, Last updated, Version 14). 4064..4091 300..273 104 85.7 Minus

BO04032.5prime Sim4 Records

Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 01:52:57 Download gff for BO04032.5prime
Subject Subject Range Query Range Percent Splice Strand
CG15261-PA 1..417 17..431 99   Plus
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 00:01:13 Download gff for BO04032.5prime
Subject Subject Range Query Range Percent Splice Strand
CG15261-PA 1..417 17..431 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-13 03:57:46 Download gff for BO04032.5prime
Subject Subject Range Query Range Percent Splice Strand
UK114-RA 93..527 5..437 98   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-09 21:11:59 Download gff for BO04032.5prime
Subject Subject Range Query Range Percent Splice Strand
UK114-RA 93..527 5..437 98   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-09 21:11:59 Download gff for BO04032.5prime
Subject Subject Range Query Range Percent Splice Strand
2L 15274264..15274390 312..437 97 <- Minus
2L 15274620..15274849 82..311 100 <- Minus
2L 15274922..15274999 5..81 93   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-13 03:57:46 Download gff for BO04032.5prime
Subject Subject Range Query Range Percent Splice Strand
arm_2L 15274264..15274390 312..437 97 <- Minus
arm_2L 15274620..15274849 82..311 100 <- Minus
arm_2L 15274922..15274999 5..81 93   Minus

BO04032.complete Sequence

448 bp (448 high quality bases) assembled on 2005-09-08

GenBank Submission: FJ629607

> BO04032.complete
GAAGTTATCAGTCGACATGTCGACGATTGTGAGGAAACTTATCAGCACTG
CAAATGCTGCCAAGCCAGTGGCTCCCTACAACCAGGCTGTGGTGGCCGAT
CGTACTGTGTATGTGTCCGGATGTCTGGGTCTGGACAAGGACACCATGAA
ACTGGTTCCTGGAGGACCCACTGAACAAGCGCAGAAGGCATTGGAGAATC
TGGAGGCTGTTCTAAAGGCGGCCGATTCCGGAGTGGACAAAGTCATCAAG
AACACAGTGTTCTTGAAGGATCTCAACGATTTCGGGGCAGTCAATGAGGT
CTACAAGCGGGTGTTCAATAAGGATTTCCCGGCCCGCAGCTGTTTCCAGG
TGGCCAAGCTGCCCATGGATGCTCTGGTGGAGATCGAGTGCATTGCCTTG
ACCGGATCTGTGGAGACGAAAACCGTGCAAGCAAGCTTTCTAGACCAT

BO04032.complete Blast Records

Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 01:24:23
Subject Length Description Subject Range Query Range Score Percent Strand
UK114-RB 417 CG15261-PB 1..414 17..430 2070 100 Plus
UK114-RA 417 CG15261-PA 1..414 17..430 2070 100 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 01:24:24
Subject Length Description Subject Range Query Range Score Percent Strand
UK114-RB 610 CG15261-RB 106..519 17..430 2070 100 Plus
UK114-RA 553 CG15261-RA 106..519 17..430 2070 100 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 01:24:21
Subject Length Description Subject Range Query Range Score Percent Strand
2L 23513712 2L 15274620..15274849 311..82 1150 100 Minus
2L 23513712 2L 15274272..15274391 430..311 600 100 Minus
2L 23513712 2L 15274922..15274986 81..17 325 100 Minus
Blast to na_te.dros performed 2014-11-28 01:24:22
Subject Length Description Subject Range Query Range Score Percent Strand
HeT-A 6083 HeT-A DM06920 6083bp Derived from U06920.2 (Rel. 67, Last updated, Version 14). 4064..4091 300..273 104 85.7 Minus

BO04032.complete Sim4 Records

Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-21 23:02:18 Download gff for BO04032.complete
Subject Subject Range Query Range Percent Splice Strand
UK114-RA 1..417 17..431 99   Plus
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-11 07:34:46 Download gff for BO04032.complete
Subject Subject Range Query Range Percent Splice Strand
UK114-RA 30..464 5..437 98   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 20:49:01 Download gff for BO04032.complete
Subject Subject Range Query Range Percent Splice Strand
UK114-RA 106..519 17..432 99   Plus
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 23:02:18 Download gff for BO04032.complete
Subject Subject Range Query Range Percent Splice Strand
UK114-RA 30..464 5..437 98   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 01:53:18 Download gff for BO04032.complete
Subject Subject Range Query Range Percent Splice Strand
UK114-RA 106..519 17..432 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 01:53:18 Download gff for BO04032.complete
Subject Subject Range Query Range Percent Splice Strand
2L 15274268..15274390 312..432 98 <- Minus
2L 15274620..15274849 82..311 100 <- Minus
2L 15274922..15274986 17..81 100   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 20:49:01 Download gff for BO04032.complete
Subject Subject Range Query Range Percent Splice Strand
arm_2L 15274268..15274390 312..432 98 <- Minus
arm_2L 15274620..15274849 82..311 100 <- Minus
arm_2L 15274922..15274986 17..81 100   Minus

BO04032.pep Sequence

Translation from 16 to 448

> BO04032.pep
MSTIVRKLISTANAAKPVAPYNQAVVADRTVYVSGCLGLDKDTMKLVPGG
PTEQAQKALENLEAVLKAADSGVDKVIKNTVFLKDLNDFGAVNEVYKRVF
NKDFPARSCFQVAKLPMDALVEIECIALTGSVETKTVQASFLDH

BO04032.pep Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 19:17:37
Subject Length Description Subject Range Query Range Score Percent Strand
UK114-PB 138 CG15261-PB 1..138 1..138 691 100 Plus
UK114-PA 138 CG15261-PA 1..138 1..138 691 100 Plus