Clone Sequence Records
BO04037.3prime Sequence
428 bp (427 high quality bases) assembled on 2005-12-01
> BO04037.3prime
ATGGTCTAGAAAGCTTGCAATTCGACAATCAATTTGAACGGTGCGGCCTG
CCTTCGCCTGGTTCTGTGAGGAAGGGGGCGGGGGCGGCGGGAACTGCAGC
AGCGAGTTGCTGATGCTGGTGCGCTGGAAACCTGCGCTGTTGTTGCTGTT
GCTGCCGCTACCCGTGGGACTGTTGCTGTGGTGCTGTGGATGCGGATGTG
CGTGCAGCGGGAACTGTTGCTGGAACTGATGACCGGTGGCCACTGAAGTG
GCGGCTGCAACGGCGGCGGCCACAACGTGCTGGAAGTGGTGCTGCTGGTG
ATTTCCAGTGGTGATCACTGCAGAACTTCTCGCTGCCCGCGGAACCGACG
ACGTGATCGGCGACTTTGTTGGCGTCTCTAGGCCCGAATTGTTGGCCGTG
GTCCACACAGACATGTCGACTGATAACT
BO04037.3prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 11:57:20
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG11430-PC | 399 | olf186-F-RC | 1..396 | 414..19 | 1980 | 100 | Minus |
CG11430-PB | 1056 | olf186-F-RB | 1..363 | 414..52 | 1815 | 100 | Minus |
CG11430-PA | 1056 | olf186-F-RA | 1..363 | 414..52 | 1815 | 100 | Minus |
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-13 13:03:35
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
olf186-F-RG | 4582 | CG11430-RG | 236..632 | 415..19 | 1985 | 100 | Minus |
olf186-F-RF | 2407 | CG11430-RF | 563..926 | 415..52 | 1820 | 100 | Minus |
olf186-F-RA | 2080 | CG11430-RA | 236..599 | 415..52 | 1820 | 100 | Minus |
Blast to na_all.dmel.RELEASE6 performed 2015-02-13 13:03:31
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
2R | 25286936 | 2R | 17851097..17851461 | 415..51 | 1825 | 100 | Minus |
Blast to na_te.dros performed 2015-02-13 13:03:32
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 6730..6958 | 304..73 | 253 | 60.9 | Minus |
Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 6724..6952 | 336..110 | 247 | 59.9 | Minus |
Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 6734..6887 | 257..106 | 205 | 63.5 | Minus |
Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 6737..6862 | 231..104 | 203 | 65.4 | Minus |
Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 6713..6838 | 219..94 | 199 | 66.4 | Minus |
Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 2314..2505 | 302..106 | 189 | 58.1 | Minus |
Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 6718..6819 | 199..95 | 183 | 71.3 | Minus |
Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 2310..2427 | 231..106 | 179 | 65.4 | Minus |
Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 2310..2417 | 210..94 | 176 | 67.8 | Minus |
Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 2307..2424 | 222..106 | 164 | 61 | Minus |
Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 2747..2857 | 220..105 | 162 | 65 | Minus |
Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 2331..2460 | 231..106 | 154 | 62.1 | Minus |
Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 2307..2382 | 181..106 | 145 | 70.5 | Minus |
Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 6735..6788 | 159..106 | 143 | 80.4 | Minus |
roo | 9092 | roo DM_ROO 9092bp | 1059..1155 | 230..135 | 140 | 61.9 | Minus |
roo | 9092 | roo DM_ROO 9092bp | 1052..1148 | 197..106 | 137 | 67 | Minus |
roo | 9092 | roo DM_ROO 9092bp | 1054..1154 | 210..106 | 137 | 64.5 | Minus |
Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 2588..2643 | 161..106 | 118 | 67.9 | Minus |
Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 2437..2668 | 337..105 | 117 | 55.4 | Minus |
roo | 9092 | roo DM_ROO 9092bp | 1062..1115 | 159..106 | 116 | 75 | Minus |
Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 1518..1575 | 192..136 | 107 | 67.2 | Minus |
Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 2766..2835 | 178..106 | 106 | 64.9 | Minus |
Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 2593..2649 | 162..106 | 105 | 64.9 | Minus |
BO04037.3prime Sim4 Records
Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 01:53:04 Download gff for
BO04037.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG11430-PC | 1..399 | 16..414 | 99 | | Minus |
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 00:01:25 Download gff for
BO04037.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG11430-PC | 1..399 | 16..414 | 99 | | Minus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-09-02 17:39:37 Download gff for
BO04037.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
olf186-F-RG | 236..636 | 15..415 | 99 | | Minus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-13 15:34:47 Download gff for
BO04037.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
olf186-F-RG | 236..636 | 15..415 | 99 | | Minus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-13 15:34:47 Download gff for
BO04037.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
2R | 17851097..17851460 | 52..415 | 100 | -> | Minus |
2R | 17855140..17855176 | 15..51 | 94 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-09-02 17:39:37 Download gff for
BO04037.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_2R | 13738602..13738965 | 52..415 | 100 | -> | Minus |
arm_2R | 13742645..13742681 | 15..51 | 94 | | Minus |
BO04037.5prime Sequence
428 bp (427 high quality bases) assembled on 2005-12-01
> BO04037.5prime
GAAGTTATCAGTCGACATGTCTGTGTGGACCACGGCCAACAATTCGGGCC
TAGAGACGCCAACAAAGTCGCCGATCACGTCGTCGGTTCCGCGGGCAGCG
AGAAGTTCTGCAGTGATCACCACTGGAAATCACCAGCAGCACCACTTCCA
GCACGTTGTGGCCGCCGCCGTTGCAGCCGCCACTTCAGTGGCCACCGGTC
ATCAGTTCCAGCAACAGTTCCCGCTGCACGCACATCCGCATCCACAGCAC
CACAGCAACAGTCCCACGGGTAGCGGCAGCAACAGCAACAACAGCGCAGG
TTTCCAGCGCACCAGCATCAGCAACTCGCTGCTGCAGTTCCCGCCGCCCC
CGCCCCCTTCCTCACAGAACCAGGCGAAGGCAGGCCGCACCGTTCAAATT
GATTGTCGAATTGCAAGCTTTCTAGACC
BO04037.5prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 11:57:21
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG11430-PC | 399 | olf186-F-RC | 1..396 | 17..412 | 1980 | 100 | Plus |
CG11430-PB | 1056 | olf186-F-RB | 1..363 | 17..379 | 1815 | 100 | Plus |
CG11430-PA | 1056 | olf186-F-RA | 1..363 | 17..379 | 1815 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-12 01:00:58
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
olf186-F-RG | 4582 | CG11430-RG | 236..632 | 16..412 | 1985 | 100 | Plus |
olf186-F-RF | 2407 | CG11430-RF | 563..926 | 16..379 | 1820 | 100 | Plus |
olf186-F-RA | 2080 | CG11430-RA | 236..599 | 16..379 | 1820 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2015-02-12 01:00:52
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
2R | 25286936 | 2R | 17851097..17851461 | 16..380 | 1825 | 100 | Plus |
Blast to na_te.dros performed 2015-02-12 01:00:54
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 6730..6958 | 127..358 | 253 | 60.9 | Plus |
Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 6724..6952 | 95..321 | 247 | 59.9 | Plus |
Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 6734..6887 | 174..325 | 205 | 63.5 | Plus |
Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 6737..6862 | 200..327 | 203 | 65.4 | Plus |
Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 6713..6838 | 212..337 | 199 | 66.4 | Plus |
Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 2314..2505 | 129..325 | 189 | 58.1 | Plus |
Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 6718..6819 | 232..336 | 183 | 71.3 | Plus |
Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 2310..2427 | 200..325 | 179 | 65.4 | Plus |
Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 2310..2417 | 221..337 | 176 | 67.8 | Plus |
Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 2307..2424 | 209..325 | 164 | 61 | Plus |
Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 2747..2857 | 211..326 | 162 | 65 | Plus |
Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 2331..2460 | 200..325 | 154 | 62.1 | Plus |
Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 2307..2382 | 250..325 | 145 | 70.5 | Plus |
Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 6735..6788 | 272..325 | 143 | 80.4 | Plus |
roo | 9092 | roo DM_ROO 9092bp | 1059..1155 | 201..296 | 140 | 61.9 | Plus |
roo | 9092 | roo DM_ROO 9092bp | 1052..1148 | 234..325 | 137 | 67 | Plus |
roo | 9092 | roo DM_ROO 9092bp | 1054..1154 | 221..325 | 137 | 64.5 | Plus |
Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 2588..2643 | 270..325 | 118 | 67.9 | Plus |
Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 2437..2668 | 94..326 | 117 | 55.4 | Plus |
roo | 9092 | roo DM_ROO 9092bp | 1062..1115 | 272..325 | 116 | 75 | Plus |
Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 1518..1575 | 239..295 | 107 | 67.2 | Plus |
Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 2766..2835 | 253..325 | 106 | 64.9 | Plus |
Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 2593..2649 | 269..325 | 105 | 64.9 | Plus |
BO04037.5prime Sim4 Records
Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 01:53:05 Download gff for
BO04037.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG11430-PC | 1..399 | 17..415 | 99 | | Plus |
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 00:01:26 Download gff for
BO04037.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG11430-PC | 1..399 | 17..415 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-28 11:36:40 Download gff for
BO04037.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
olf186-F-RG | 236..636 | 16..416 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-12 04:51:00 Download gff for
BO04037.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
olf186-F-RG | 236..636 | 16..416 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-12 04:51:00 Download gff for
BO04037.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
2R | 17851097..17851460 | 16..379 | 100 | -> | Plus |
2R | 17855140..17855176 | 380..416 | 94 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-28 11:36:40 Download gff for
BO04037.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_2R | 13738602..13738965 | 16..379 | 100 | -> | Plus |
arm_2R | 13742645..13742681 | 380..416 | 94 | | Plus |
BO04037.complete Sequence
430 bp (430 high quality bases) assembled on 2005-09-08
GenBank Submission: FJ629610
> BO04037.complete
GAAGTTATCAGTCGACATGTCTGTGTGGACCACGGCCAACAATTCGGGCC
TAGAGACGCCAACAAAGTCGCCGATCACGTCGTCGGTTCCGCGGGCAGCG
AGAAGTTCTGCAGTGATCACCACTGGAAATCACCAGCAGCACCACTTCCA
GCACGTTGTGGCCGCCGCCGTTGCAGCCGCCACTTCAGTGGCCACCGGTC
ATCAGTTCCAGCAACAGTTCCCGCTGCACGCACATCCGCATCCACAGCAC
CACAGCAACAGTCCCACGGGTAGCGGCAGCAACAGCAACAACAGCGCAGG
TTTCCAGCGCACCAGCATCAGCAACTCGCTGCTGCAGTTCCCGCCGCCCC
CGCCCCCTTCCTCACAGAACCAGGCGAAGGCAGGCCGCACCGTTCAAATT
GATTGTCGAATTGCAAGCTTTCTAGACCAT
BO04037.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-27 16:32:28
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
olf186-F-RF | 1056 | CG11430-PF | 1..363 | 17..379 | 1815 | 100 | Plus |
olf186-F-RA | 1056 | CG11430-PA | 1..363 | 17..379 | 1815 | 100 | Plus |
olf186-F-RB | 1056 | CG11430-PB | 1..363 | 17..379 | 1815 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 16:32:29
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
olf186-F-RG | 4582 | CG11430-RG | 236..632 | 16..412 | 1985 | 100 | Plus |
olf186-F-RF | 2407 | CG11430-RF | 563..926 | 16..379 | 1820 | 100 | Plus |
olf186-F-RA | 2080 | CG11430-RA | 236..599 | 16..379 | 1820 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 16:32:24
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
2R | 25286936 | 2R | 17851097..17851461 | 16..380 | 1825 | 100 | Plus |
Blast to na_te.dros performed 2014-11-27 16:32:25
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 6730..6958 | 127..358 | 253 | 60.9 | Plus |
Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 6724..6952 | 95..321 | 247 | 59.9 | Plus |
Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 6734..6887 | 174..325 | 205 | 63.5 | Plus |
Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 6737..6862 | 200..327 | 203 | 65.4 | Plus |
Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 6713..6838 | 212..337 | 199 | 66.4 | Plus |
Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 2314..2505 | 129..325 | 189 | 58.1 | Plus |
Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 6718..6819 | 232..336 | 183 | 71.3 | Plus |
Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 2310..2427 | 200..325 | 179 | 65.4 | Plus |
Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 2310..2417 | 221..337 | 176 | 67.8 | Plus |
Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 2307..2424 | 209..325 | 164 | 61 | Plus |
Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 2747..2857 | 211..326 | 162 | 65 | Plus |
Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 2331..2460 | 200..325 | 154 | 62.1 | Plus |
Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 2307..2382 | 250..325 | 145 | 70.5 | Plus |
Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 6735..6788 | 272..325 | 143 | 80.4 | Plus |
roo | 9092 | roo DM_ROO 9092bp | 1059..1155 | 201..296 | 140 | 61.9 | Plus |
roo | 9092 | roo DM_ROO 9092bp | 1052..1148 | 234..325 | 137 | 67 | Plus |
roo | 9092 | roo DM_ROO 9092bp | 1054..1154 | 221..325 | 137 | 64.5 | Plus |
Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 2588..2643 | 270..325 | 118 | 67.9 | Plus |
Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 2437..2668 | 94..326 | 117 | 55.4 | Plus |
roo | 9092 | roo DM_ROO 9092bp | 1062..1115 | 272..325 | 116 | 75 | Plus |
Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 1518..1575 | 239..295 | 107 | 67.2 | Plus |
Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 2766..2835 | 253..325 | 106 | 64.9 | Plus |
Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 2593..2649 | 269..325 | 105 | 64.9 | Plus |
BO04037.complete Sim4 Records
Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-21 13:54:51 Download gff for
BO04037.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
olf186-F-RC | 1..399 | 17..415 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-11 02:00:37 Download gff for
BO04037.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
olf186-F-RC | 219..619 | 16..416 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 18:55:28 Download gff for
BO04037.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
olf186-F-RG | 237..632 | 17..414 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 13:54:51 Download gff for
BO04037.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
olf186-F-RC | 219..619 | 16..416 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 17:20:49 Download gff for
BO04037.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
olf186-F-RG | 237..632 | 17..414 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 17:20:49 Download gff for
BO04037.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
2R | 17851098..17851460 | 17..379 | 100 | -> | Plus |
2R | 17855140..17855172 | 380..414 | 94 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 18:55:28 Download gff for
BO04037.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_2R | 13738603..13738965 | 17..379 | 100 | -> | Plus |
arm_2R | 13742645..13742677 | 380..414 | 94 | | Plus |
BO04037.pep Sequence
Translation from 16 to 430
> BO04037.pep
MSVWTTANNSGLETPTKSPITSSVPRAARSSAVITTGNHQQHHFQHVVAA
AVAAATSVATGHQFQQQFPLHAHPHPQHHSNSPTGSGSNSNNSAGFQRTS
ISNSLLQFPPPPPPSSQNQAKAGRTVQIDCRIASFLDH
BO04037.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 00:44:59
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
olf186-F-PF | 351 | CG11430-PF | 1..121 | 1..121 | 640 | 100 | Plus |
olf186-F-PA | 351 | CG11430-PA | 1..121 | 1..121 | 640 | 100 | Plus |
olf186-F-PB | 351 | CG11430-PB | 1..121 | 1..121 | 640 | 100 | Plus |