Clone BO04037 Report

Search the DGRC for BO04037

Clone and Library Details

Library:BO
Tissue Source:D. melanogaster
Created by:Joe Carlson
Date Registered:2004-06-03
Comments:Infusion clones with open reading frames
Original Plate Number:40
Well:37
Vector:pDNR-Dual
Associated Gene/Transcriptolf186-F-RC
Protein status:BO04037.pep: validated full length
Sequenced Size:430

Clone Sequence Records

BO04037.3prime Sequence

428 bp (427 high quality bases) assembled on 2005-12-01

> BO04037.3prime
ATGGTCTAGAAAGCTTGCAATTCGACAATCAATTTGAACGGTGCGGCCTG
CCTTCGCCTGGTTCTGTGAGGAAGGGGGCGGGGGCGGCGGGAACTGCAGC
AGCGAGTTGCTGATGCTGGTGCGCTGGAAACCTGCGCTGTTGTTGCTGTT
GCTGCCGCTACCCGTGGGACTGTTGCTGTGGTGCTGTGGATGCGGATGTG
CGTGCAGCGGGAACTGTTGCTGGAACTGATGACCGGTGGCCACTGAAGTG
GCGGCTGCAACGGCGGCGGCCACAACGTGCTGGAAGTGGTGCTGCTGGTG
ATTTCCAGTGGTGATCACTGCAGAACTTCTCGCTGCCCGCGGAACCGACG
ACGTGATCGGCGACTTTGTTGGCGTCTCTAGGCCCGAATTGTTGGCCGTG
GTCCACACAGACATGTCGACTGATAACT

BO04037.3prime Blast Records

Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 11:57:20
Subject Length Description Subject Range Query Range Score Percent Strand
CG11430-PC 399 olf186-F-RC 1..396 414..19 1980 100 Minus
CG11430-PB 1056 olf186-F-RB 1..363 414..52 1815 100 Minus
CG11430-PA 1056 olf186-F-RA 1..363 414..52 1815 100 Minus
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-13 13:03:35
Subject Length Description Subject Range Query Range Score Percent Strand
olf186-F-RG 4582 CG11430-RG 236..632 415..19 1985 100 Minus
olf186-F-RF 2407 CG11430-RF 563..926 415..52 1820 100 Minus
olf186-F-RA 2080 CG11430-RA 236..599 415..52 1820 100 Minus
Blast to na_all.dmel.RELEASE6 performed 2015-02-13 13:03:31
Subject Length Description Subject Range Query Range Score Percent Strand
2R 25286936 2R 17851097..17851461 415..51 1825 100 Minus
Blast to na_te.dros performed 2015-02-13 13:03:32
Subject Length Description Subject Range Query Range Score Percent Strand
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 6730..6958 304..73 253 60.9 Minus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 6724..6952 336..110 247 59.9 Minus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 6734..6887 257..106 205 63.5 Minus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 6737..6862 231..104 203 65.4 Minus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 6713..6838 219..94 199 66.4 Minus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 2314..2505 302..106 189 58.1 Minus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 6718..6819 199..95 183 71.3 Minus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 2310..2427 231..106 179 65.4 Minus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 2310..2417 210..94 176 67.8 Minus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 2307..2424 222..106 164 61 Minus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 2747..2857 220..105 162 65 Minus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 2331..2460 231..106 154 62.1 Minus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 2307..2382 181..106 145 70.5 Minus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 6735..6788 159..106 143 80.4 Minus
roo 9092 roo DM_ROO 9092bp 1059..1155 230..135 140 61.9 Minus
roo 9092 roo DM_ROO 9092bp 1052..1148 197..106 137 67 Minus
roo 9092 roo DM_ROO 9092bp 1054..1154 210..106 137 64.5 Minus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 2588..2643 161..106 118 67.9 Minus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 2437..2668 337..105 117 55.4 Minus
roo 9092 roo DM_ROO 9092bp 1062..1115 159..106 116 75 Minus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 1518..1575 192..136 107 67.2 Minus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 2766..2835 178..106 106 64.9 Minus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 2593..2649 162..106 105 64.9 Minus

BO04037.3prime Sim4 Records

Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 01:53:04 Download gff for BO04037.3prime
Subject Subject Range Query Range Percent Splice Strand
CG11430-PC 1..399 16..414 99   Minus
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 00:01:25 Download gff for BO04037.3prime
Subject Subject Range Query Range Percent Splice Strand
CG11430-PC 1..399 16..414 99   Minus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-09-02 17:39:37 Download gff for BO04037.3prime
Subject Subject Range Query Range Percent Splice Strand
olf186-F-RG 236..636 15..415 99   Minus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-13 15:34:47 Download gff for BO04037.3prime
Subject Subject Range Query Range Percent Splice Strand
olf186-F-RG 236..636 15..415 99   Minus
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-13 15:34:47 Download gff for BO04037.3prime
Subject Subject Range Query Range Percent Splice Strand
2R 17851097..17851460 52..415 100 -> Minus
2R 17855140..17855176 15..51 94   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-09-02 17:39:37 Download gff for BO04037.3prime
Subject Subject Range Query Range Percent Splice Strand
arm_2R 13738602..13738965 52..415 100 -> Minus
arm_2R 13742645..13742681 15..51 94   Minus

BO04037.5prime Sequence

428 bp (427 high quality bases) assembled on 2005-12-01

> BO04037.5prime
GAAGTTATCAGTCGACATGTCTGTGTGGACCACGGCCAACAATTCGGGCC
TAGAGACGCCAACAAAGTCGCCGATCACGTCGTCGGTTCCGCGGGCAGCG
AGAAGTTCTGCAGTGATCACCACTGGAAATCACCAGCAGCACCACTTCCA
GCACGTTGTGGCCGCCGCCGTTGCAGCCGCCACTTCAGTGGCCACCGGTC
ATCAGTTCCAGCAACAGTTCCCGCTGCACGCACATCCGCATCCACAGCAC
CACAGCAACAGTCCCACGGGTAGCGGCAGCAACAGCAACAACAGCGCAGG
TTTCCAGCGCACCAGCATCAGCAACTCGCTGCTGCAGTTCCCGCCGCCCC
CGCCCCCTTCCTCACAGAACCAGGCGAAGGCAGGCCGCACCGTTCAAATT
GATTGTCGAATTGCAAGCTTTCTAGACC

BO04037.5prime Blast Records

Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 11:57:21
Subject Length Description Subject Range Query Range Score Percent Strand
CG11430-PC 399 olf186-F-RC 1..396 17..412 1980 100 Plus
CG11430-PB 1056 olf186-F-RB 1..363 17..379 1815 100 Plus
CG11430-PA 1056 olf186-F-RA 1..363 17..379 1815 100 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-12 01:00:58
Subject Length Description Subject Range Query Range Score Percent Strand
olf186-F-RG 4582 CG11430-RG 236..632 16..412 1985 100 Plus
olf186-F-RF 2407 CG11430-RF 563..926 16..379 1820 100 Plus
olf186-F-RA 2080 CG11430-RA 236..599 16..379 1820 100 Plus
Blast to na_all.dmel.RELEASE6 performed 2015-02-12 01:00:52
Subject Length Description Subject Range Query Range Score Percent Strand
2R 25286936 2R 17851097..17851461 16..380 1825 100 Plus
Blast to na_te.dros performed 2015-02-12 01:00:54
Subject Length Description Subject Range Query Range Score Percent Strand
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 6730..6958 127..358 253 60.9 Plus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 6724..6952 95..321 247 59.9 Plus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 6734..6887 174..325 205 63.5 Plus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 6737..6862 200..327 203 65.4 Plus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 6713..6838 212..337 199 66.4 Plus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 2314..2505 129..325 189 58.1 Plus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 6718..6819 232..336 183 71.3 Plus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 2310..2427 200..325 179 65.4 Plus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 2310..2417 221..337 176 67.8 Plus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 2307..2424 209..325 164 61 Plus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 2747..2857 211..326 162 65 Plus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 2331..2460 200..325 154 62.1 Plus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 2307..2382 250..325 145 70.5 Plus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 6735..6788 272..325 143 80.4 Plus
roo 9092 roo DM_ROO 9092bp 1059..1155 201..296 140 61.9 Plus
roo 9092 roo DM_ROO 9092bp 1052..1148 234..325 137 67 Plus
roo 9092 roo DM_ROO 9092bp 1054..1154 221..325 137 64.5 Plus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 2588..2643 270..325 118 67.9 Plus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 2437..2668 94..326 117 55.4 Plus
roo 9092 roo DM_ROO 9092bp 1062..1115 272..325 116 75 Plus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 1518..1575 239..295 107 67.2 Plus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 2766..2835 253..325 106 64.9 Plus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 2593..2649 269..325 105 64.9 Plus

BO04037.5prime Sim4 Records

Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 01:53:05 Download gff for BO04037.5prime
Subject Subject Range Query Range Percent Splice Strand
CG11430-PC 1..399 17..415 99   Plus
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 00:01:26 Download gff for BO04037.5prime
Subject Subject Range Query Range Percent Splice Strand
CG11430-PC 1..399 17..415 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-28 11:36:40 Download gff for BO04037.5prime
Subject Subject Range Query Range Percent Splice Strand
olf186-F-RG 236..636 16..416 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-12 04:51:00 Download gff for BO04037.5prime
Subject Subject Range Query Range Percent Splice Strand
olf186-F-RG 236..636 16..416 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-12 04:51:00 Download gff for BO04037.5prime
Subject Subject Range Query Range Percent Splice Strand
2R 17851097..17851460 16..379 100 -> Plus
2R 17855140..17855176 380..416 94   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-28 11:36:40 Download gff for BO04037.5prime
Subject Subject Range Query Range Percent Splice Strand
arm_2R 13738602..13738965 16..379 100 -> Plus
arm_2R 13742645..13742681 380..416 94   Plus

BO04037.complete Sequence

430 bp (430 high quality bases) assembled on 2005-09-08

GenBank Submission: FJ629610

> BO04037.complete
GAAGTTATCAGTCGACATGTCTGTGTGGACCACGGCCAACAATTCGGGCC
TAGAGACGCCAACAAAGTCGCCGATCACGTCGTCGGTTCCGCGGGCAGCG
AGAAGTTCTGCAGTGATCACCACTGGAAATCACCAGCAGCACCACTTCCA
GCACGTTGTGGCCGCCGCCGTTGCAGCCGCCACTTCAGTGGCCACCGGTC
ATCAGTTCCAGCAACAGTTCCCGCTGCACGCACATCCGCATCCACAGCAC
CACAGCAACAGTCCCACGGGTAGCGGCAGCAACAGCAACAACAGCGCAGG
TTTCCAGCGCACCAGCATCAGCAACTCGCTGCTGCAGTTCCCGCCGCCCC
CGCCCCCTTCCTCACAGAACCAGGCGAAGGCAGGCCGCACCGTTCAAATT
GATTGTCGAATTGCAAGCTTTCTAGACCAT

BO04037.complete Blast Records

Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-27 16:32:28
Subject Length Description Subject Range Query Range Score Percent Strand
olf186-F-RF 1056 CG11430-PF 1..363 17..379 1815 100 Plus
olf186-F-RA 1056 CG11430-PA 1..363 17..379 1815 100 Plus
olf186-F-RB 1056 CG11430-PB 1..363 17..379 1815 100 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 16:32:29
Subject Length Description Subject Range Query Range Score Percent Strand
olf186-F-RG 4582 CG11430-RG 236..632 16..412 1985 100 Plus
olf186-F-RF 2407 CG11430-RF 563..926 16..379 1820 100 Plus
olf186-F-RA 2080 CG11430-RA 236..599 16..379 1820 100 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 16:32:24
Subject Length Description Subject Range Query Range Score Percent Strand
2R 25286936 2R 17851097..17851461 16..380 1825 100 Plus
Blast to na_te.dros performed 2014-11-27 16:32:25
Subject Length Description Subject Range Query Range Score Percent Strand
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 6730..6958 127..358 253 60.9 Plus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 6724..6952 95..321 247 59.9 Plus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 6734..6887 174..325 205 63.5 Plus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 6737..6862 200..327 203 65.4 Plus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 6713..6838 212..337 199 66.4 Plus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 2314..2505 129..325 189 58.1 Plus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 6718..6819 232..336 183 71.3 Plus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 2310..2427 200..325 179 65.4 Plus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 2310..2417 221..337 176 67.8 Plus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 2307..2424 209..325 164 61 Plus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 2747..2857 211..326 162 65 Plus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 2331..2460 200..325 154 62.1 Plus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 2307..2382 250..325 145 70.5 Plus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 6735..6788 272..325 143 80.4 Plus
roo 9092 roo DM_ROO 9092bp 1059..1155 201..296 140 61.9 Plus
roo 9092 roo DM_ROO 9092bp 1052..1148 234..325 137 67 Plus
roo 9092 roo DM_ROO 9092bp 1054..1154 221..325 137 64.5 Plus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 2588..2643 270..325 118 67.9 Plus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 2437..2668 94..326 117 55.4 Plus
roo 9092 roo DM_ROO 9092bp 1062..1115 272..325 116 75 Plus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 1518..1575 239..295 107 67.2 Plus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 2766..2835 253..325 106 64.9 Plus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 2593..2649 269..325 105 64.9 Plus

BO04037.complete Sim4 Records

Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-21 13:54:51 Download gff for BO04037.complete
Subject Subject Range Query Range Percent Splice Strand
olf186-F-RC 1..399 17..415 99   Plus
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-11 02:00:37 Download gff for BO04037.complete
Subject Subject Range Query Range Percent Splice Strand
olf186-F-RC 219..619 16..416 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 18:55:28 Download gff for BO04037.complete
Subject Subject Range Query Range Percent Splice Strand
olf186-F-RG 237..632 17..414 99   Plus
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 13:54:51 Download gff for BO04037.complete
Subject Subject Range Query Range Percent Splice Strand
olf186-F-RC 219..619 16..416 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 17:20:49 Download gff for BO04037.complete
Subject Subject Range Query Range Percent Splice Strand
olf186-F-RG 237..632 17..414 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 17:20:49 Download gff for BO04037.complete
Subject Subject Range Query Range Percent Splice Strand
2R 17851098..17851460 17..379 100 -> Plus
2R 17855140..17855172 380..414 94   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 18:55:28 Download gff for BO04037.complete
Subject Subject Range Query Range Percent Splice Strand
arm_2R 13738603..13738965 17..379 100 -> Plus
arm_2R 13742645..13742677 380..414 94   Plus

BO04037.pep Sequence

Translation from 16 to 430

> BO04037.pep
MSVWTTANNSGLETPTKSPITSSVPRAARSSAVITTGNHQQHHFQHVVAA
AVAAATSVATGHQFQQQFPLHAHPHPQHHSNSPTGSGSNSNNSAGFQRTS
ISNSLLQFPPPPPPSSQNQAKAGRTVQIDCRIASFLDH

BO04037.pep Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 00:44:59
Subject Length Description Subject Range Query Range Score Percent Strand
olf186-F-PF 351 CG11430-PF 1..121 1..121 640 100 Plus
olf186-F-PA 351 CG11430-PA 1..121 1..121 640 100 Plus
olf186-F-PB 351 CG11430-PB 1..121 1..121 640 100 Plus