Clone Sequence Records
BO04051.3prime Sequence
683 bp (682 high quality bases) assembled on 2005-12-01
> BO04051.3prime
ATGGTCTAGAAAGCTTGCGTTTGCGGGAACCGGCGATCCAGATGCAAGAG
ATGAGGACGTGGGAGACACCGATGGTGACGAGGTGCTGGCCGCAGCTCCG
CTTTCCGGGACGGGCGATGGCCTCGTGTTGAAGAACTGTTTGATGATGCG
CTTGATGTAGTTGCATGAAGTTTCGTTGTTCGAGCTGGACACCACGTTGT
CCACTCGGTACGGCGGCGAGATGGTGACTTCATTTAGGATCTGTATGTTA
AGTCCTTGCCAGGAGACTTCATTGTACCCGTATTGTTTGGCTATCGCTCT
ATAGAGTTCCTGCGCCTCTGGACTGACATCAGCATTCTTAGACTTCAAGT
AGTCCTGTCTTCGCTCAACTGTTTTCCTCAGACGCATTTTGACCTGTTCC
AGATTAAGCTTTTGCGGATCATCAAAGTTGCCGTTGCACTCCTTGATCAC
CTGCACGTTGCTGCAGAGCGAGAGGTTCATCGCGTAGATATCACTCAGCT
CCTCCGTGGACTTGGATCGGCATTTCAGGATAAGCATCTTTGTGTTGTGA
TCGAAGGCCAGCACCTCGCCCTCCACCTCCTCGTTGAAACAGGTCGTACA
GACGACTGTGGATCCGATGCTGAAGCAGTCGTTCACTGCATTCACTGCGC
TCGCAGCGGCAGCGGCCATGTCGACTGATAACT
BO04051.3prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 11:57:36
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG15735-PA | 654 | CG15735-RA | 1..651 | 669..19 | 3255 | 100 | Minus |
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-11 02:21:35
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG15735-RA | 1251 | CG15735-RA | 542..1192 | 669..19 | 3255 | 100 | Minus |
Blast to na_all.dmel.RELEASE6 performed 2015-02-11 02:21:33
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
X | 23542271 | X | 12019181..12019325 | 669..525 | 725 | 100 | Minus |
X | 23542271 | X | 12019628..12019760 | 524..392 | 665 | 100 | Minus |
X | 23542271 | X | 12020006..12020138 | 277..145 | 665 | 100 | Minus |
X | 23542271 | X | 12020535..12020660 | 144..19 | 630 | 100 | Minus |
X | 23542271 | X | 12019821..12019941 | 397..277 | 605 | 100 | Minus |
Blast to na_te.dros performed 2015-02-11 02:21:34
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Dvir\Ulysses | 10653 | Dvir\Ulysses DVULYSS 10653bp AKA(S37633) Derived from X56645 (Rel. 38, Last updated, Version 6). | 4845..4904 | 61..121 | 113 | 67.2 | Plus |
BO04051.3prime Sim4 Records
Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 01:53:21 Download gff for
BO04051.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG15735-PA | 1..654 | 15..669 | 99 | | Minus |
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 00:01:55 Download gff for
BO04051.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG15735-PA | 1..654 | 15..669 | 99 | | Minus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-22 20:46:18 Download gff for
BO04051.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG15735-RA | 542..1195 | 15..669 | 99 | | Minus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-11 04:47:48 Download gff for
BO04051.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG15735-RA | 542..1195 | 15..669 | 99 | | Minus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-11 04:47:48 Download gff for
BO04051.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
X | 12019181..12019325 | 525..669 | 100 | -> | Minus |
X | 12019628..12019758 | 394..524 | 100 | -> | Minus |
X | 12019825..12019941 | 277..393 | 100 | -> | Minus |
X | 12020007..12020138 | 145..276 | 100 | -> | Minus |
X | 12020535..12020663 | 15..144 | 98 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-22 20:46:18 Download gff for
BO04051.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_X | 11913214..11913358 | 525..669 | 100 | -> | Minus |
arm_X | 11913661..11913791 | 394..524 | 100 | -> | Minus |
arm_X | 11913858..11913974 | 277..393 | 100 | -> | Minus |
arm_X | 11914040..11914171 | 145..276 | 100 | -> | Minus |
arm_X | 11914568..11914696 | 15..144 | 98 | | Minus |
BO04051.5prime Sequence
683 bp (682 high quality bases) assembled on 2005-12-01
> BO04051.5prime
GAAGTTATCAGTCGACATGGCCGCTGCCGCTGCGAGCGCAGTGAATGCAG
TGAACGACTGCTTCAGCATCGGATCCACAGTCGTCTGTACGACCTGTTTC
AACGAGGAGGTGGAGGGCGAGGTGCTGGCCTTCGATCACAACACAAAGAT
GCTTATCCTGAAATGCCGATCCAAGTCCACGGAGGAGCTGAGTGATATCT
ACGCGATGAACCTCTCGCTCTGCAGCAACGTGCAGGTGATCAAGGAGTGC
AACGGCAACTTTGATGATCCGCAAAAGCTTAATCTGGAACAGGTCAAAAT
GCGTCTGAGGAAAACAGTTGAGCGAAGACAGGACTACTTGAAGTCTAAGA
ATGCTGATGTCAGTCCAGAGGCGCAGGAACTCTATAGAGCGATAGCCAAA
CAATACGGGTACAATGAAGTCTCCTGGCAAGGACTTAACATACAGATCCT
AAATGAAGTCACCATCTCGCCGCCGTACCGAGTGGACAACGTGGTGTCCA
GCTCGAACAACGAAACTTCATGCAACTACATCAAGCGCATCATCAAACAG
TTCTTCAACACGAGGCCATCGCCCGTCCCGGAAAGCGGAGCTGCGGCCAG
CACCTCGTCACCATCGGTGTCTCCCACGTCCTCATCTCTTGCATCTGGAT
CGCCGGTTCCCGCAAACGCAAGCTTTCTAGACC
BO04051.5prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 11:57:37
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG15735-PA | 654 | CG15735-RA | 1..651 | 17..667 | 3255 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-10 16:40:23
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG15735-RA | 1251 | CG15735-RA | 542..1192 | 17..667 | 3255 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2015-02-10 16:40:15
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
X | 23542271 | X | 12019181..12019325 | 17..161 | 725 | 100 | Plus |
X | 23542271 | X | 12019628..12019760 | 162..294 | 665 | 100 | Plus |
X | 23542271 | X | 12020006..12020138 | 409..541 | 665 | 100 | Plus |
X | 23542271 | X | 12020535..12020660 | 542..667 | 630 | 100 | Plus |
X | 23542271 | X | 12019821..12019941 | 289..409 | 605 | 100 | Plus |
Blast to na_te.dros performed 2015-02-10 16:40:19
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Dvir\Ulysses | 10653 | Dvir\Ulysses DVULYSS 10653bp AKA(S37633) Derived from X56645 (Rel. 38, Last updated, Version 6). | 4845..4904 | 625..565 | 113 | 67.2 | Minus |
BO04051.5prime Sim4 Records
Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 01:53:22 Download gff for
BO04051.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG15735-PA | 1..654 | 17..671 | 99 | | Plus |
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 00:01:56 Download gff for
BO04051.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG15735-PA | 1..654 | 17..671 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-15 02:39:36 Download gff for
BO04051.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG15735-RA | 542..1195 | 17..671 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-10 18:24:13 Download gff for
BO04051.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG15735-RA | 542..1195 | 17..671 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-10 18:24:13 Download gff for
BO04051.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
X | 12019181..12019325 | 17..161 | 100 | -> | Plus |
X | 12019628..12019758 | 162..292 | 100 | -> | Plus |
X | 12019825..12019941 | 293..409 | 100 | -> | Plus |
X | 12020007..12020138 | 410..541 | 100 | -> | Plus |
X | 12020535..12020663 | 542..671 | 98 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-15 02:39:36 Download gff for
BO04051.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_X | 11913661..11913791 | 162..292 | 100 | -> | Plus |
arm_X | 11913214..11913358 | 17..161 | 100 | -> | Plus |
arm_X | 11913858..11913974 | 293..409 | 100 | -> | Plus |
arm_X | 11914040..11914171 | 410..541 | 100 | -> | Plus |
arm_X | 11914568..11914696 | 542..671 | 98 | | Plus |
BO04051.complete Sequence
685 bp (685 high quality bases) assembled on 2005-10-17
GenBank Submission: FJ629616
> BO04051.complete
GAAGTTATCAGTCGACATGGCCGCTGCCGCTGCGAGCGCAGTGAATGCAG
TGAACGACTGCTTCAGCATCGGATCCACAGTCGTCTGTACGACCTGTTTC
AACGAGGAGGTGGAGGGCGAGGTGCTGGCCTTCGATCACAACACAAAGAT
GCTTATCCTGAAATGCCGATCCAAGTCCACGGAGGAGCTGAGTGATATCT
ACGCGATGAACCTCTCGCTCTGCAGCAACGTGCAGGTGATCAAGGAGTGC
AACGGCAACTTTGATGATCCGCAAAAGCTTAATCTGGAACAGGTCAAAAT
GCGTCTGAGGAAAACAGTTGAGCGAAGACAGGACTACTTGAAGTCTAAGA
ATGCTGATGTCAGTCCAGAGGCGCAGGAACTCTATAGAGCGATAGCCAAA
CAATACGGGTACAATGAAGTCTCCTGGCAAGGACTTAACATACAGATCCT
AAATGAAGTCACCATCTCGCCGCCGTACCGAGTGGACAACGTGGTGTCCA
GCTCGAACAACGAAACTTCATGCAACTACATCAAGCGCATCATCAAACAG
TTCTTCAACACGAGGCCATCGCCCGTCCCGGAAAGCGGAGCTGCGGCCAG
CACCTCGTCACCATCGGTGTCTCCCACGTCCTCATCTCTTGCATCTGGAT
CGCCGGTTCCCGCAAACGCAAGCTTTCTAGACCAT
BO04051.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-27 23:41:17
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG15735-RA | 654 | CG15735-PA | 1..651 | 17..667 | 3255 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 23:41:18
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG15735-RA | 1251 | CG15735-RA | 542..1192 | 17..667 | 3255 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 23:41:15
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
X | 23542271 | X | 12019181..12019325 | 17..161 | 725 | 100 | Plus |
X | 23542271 | X | 12019628..12019760 | 162..294 | 665 | 100 | Plus |
X | 23542271 | X | 12020006..12020138 | 409..541 | 665 | 100 | Plus |
X | 23542271 | X | 12020535..12020660 | 542..667 | 630 | 100 | Plus |
X | 23542271 | X | 12019821..12019941 | 289..409 | 605 | 100 | Plus |
Blast to na_te.dros performed 2014-11-27 23:41:16
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Dvir\Ulysses | 10653 | Dvir\Ulysses DVULYSS 10653bp AKA(S37633) Derived from X56645 (Rel. 38, Last updated, Version 6). | 4845..4904 | 625..565 | 113 | 67.2 | Minus |
BO04051.complete Sim4 Records
Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-21 22:33:43 Download gff for
BO04051.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG15735-RA | 1..654 | 17..671 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-11 07:01:08 Download gff for
BO04051.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG15735-RA | 538..1191 | 17..671 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 19:35:26 Download gff for
BO04051.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG15735-RA | 542..1192 | 17..669 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 22:33:43 Download gff for
BO04051.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG15735-RA | 538..1191 | 17..671 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 01:06:09 Download gff for
BO04051.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG15735-RA | 542..1192 | 17..669 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 01:06:09 Download gff for
BO04051.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
X | 12019181..12019325 | 17..161 | 100 | -> | Plus |
X | 12019628..12019758 | 162..292 | 100 | -> | Plus |
X | 12019825..12019941 | 293..409 | 100 | -> | Plus |
X | 12020007..12020138 | 410..541 | 100 | -> | Plus |
X | 12020535..12020660 | 542..669 | 98 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 19:35:26 Download gff for
BO04051.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_X | 11913214..11913358 | 17..161 | 100 | -> | Plus |
arm_X | 11913661..11913791 | 162..292 | 100 | -> | Plus |
arm_X | 11913858..11913974 | 293..409 | 100 | -> | Plus |
arm_X | 11914040..11914171 | 410..541 | 100 | -> | Plus |
arm_X | 11914568..11914693 | 542..669 | 98 | | Plus |
BO04051.pep Sequence
Translation from 16 to 685
> BO04051.pep
MAAAAASAVNAVNDCFSIGSTVVCTTCFNEEVEGEVLAFDHNTKMLILKC
RSKSTEELSDIYAMNLSLCSNVQVIKECNGNFDDPQKLNLEQVKMRLRKT
VERRQDYLKSKNADVSPEAQELYRAIAKQYGYNEVSWQGLNIQILNEVTI
SPPYRVDNVVSSSNNETSCNYIKRIIKQFFNTRPSPVPESGAAASTSSPS
VSPTSSSLASGSPVPANASFLDH
BO04051.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 19:35:38
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG15735-PA | 217 | CG15735-PA | 1..217 | 1..217 | 1108 | 100 | Plus |
CG14164-PB | 186 | CG14164-PB | 1..181 | 9..179 | 260 | 30.4 | Plus |
CG14164-PA | 186 | CG14164-PA | 1..181 | 9..179 | 260 | 30.4 | Plus |