Clone BO04051 Report

Search the DGRC for BO04051

Clone and Library Details

Library:BO
Tissue Source:D. melanogaster
Created by:Joe Carlson
Date Registered:2004-06-03
Comments:Infusion clones with open reading frames
Original Plate Number:40
Well:51
Vector:pDNR-Dual
Associated Gene/TranscriptCG15735-RA
Protein status:BO04051.pep: validated full length
Sequenced Size:685

Clone Sequence Records

BO04051.3prime Sequence

683 bp (682 high quality bases) assembled on 2005-12-01

> BO04051.3prime
ATGGTCTAGAAAGCTTGCGTTTGCGGGAACCGGCGATCCAGATGCAAGAG
ATGAGGACGTGGGAGACACCGATGGTGACGAGGTGCTGGCCGCAGCTCCG
CTTTCCGGGACGGGCGATGGCCTCGTGTTGAAGAACTGTTTGATGATGCG
CTTGATGTAGTTGCATGAAGTTTCGTTGTTCGAGCTGGACACCACGTTGT
CCACTCGGTACGGCGGCGAGATGGTGACTTCATTTAGGATCTGTATGTTA
AGTCCTTGCCAGGAGACTTCATTGTACCCGTATTGTTTGGCTATCGCTCT
ATAGAGTTCCTGCGCCTCTGGACTGACATCAGCATTCTTAGACTTCAAGT
AGTCCTGTCTTCGCTCAACTGTTTTCCTCAGACGCATTTTGACCTGTTCC
AGATTAAGCTTTTGCGGATCATCAAAGTTGCCGTTGCACTCCTTGATCAC
CTGCACGTTGCTGCAGAGCGAGAGGTTCATCGCGTAGATATCACTCAGCT
CCTCCGTGGACTTGGATCGGCATTTCAGGATAAGCATCTTTGTGTTGTGA
TCGAAGGCCAGCACCTCGCCCTCCACCTCCTCGTTGAAACAGGTCGTACA
GACGACTGTGGATCCGATGCTGAAGCAGTCGTTCACTGCATTCACTGCGC
TCGCAGCGGCAGCGGCCATGTCGACTGATAACT

BO04051.3prime Blast Records

Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 11:57:36
Subject Length Description Subject Range Query Range Score Percent Strand
CG15735-PA 654 CG15735-RA 1..651 669..19 3255 100 Minus
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-11 02:21:35
Subject Length Description Subject Range Query Range Score Percent Strand
CG15735-RA 1251 CG15735-RA 542..1192 669..19 3255 100 Minus
Blast to na_all.dmel.RELEASE6 performed 2015-02-11 02:21:33
Subject Length Description Subject Range Query Range Score Percent Strand
X 23542271 X 12019181..12019325 669..525 725 100 Minus
X 23542271 X 12019628..12019760 524..392 665 100 Minus
X 23542271 X 12020006..12020138 277..145 665 100 Minus
X 23542271 X 12020535..12020660 144..19 630 100 Minus
X 23542271 X 12019821..12019941 397..277 605 100 Minus
Blast to na_te.dros performed 2015-02-11 02:21:34
Subject Length Description Subject Range Query Range Score Percent Strand
Dvir\Ulysses 10653 Dvir\Ulysses DVULYSS 10653bp AKA(S37633) Derived from X56645 (Rel. 38, Last updated, Version 6). 4845..4904 61..121 113 67.2 Plus

BO04051.3prime Sim4 Records

Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 01:53:21 Download gff for BO04051.3prime
Subject Subject Range Query Range Percent Splice Strand
CG15735-PA 1..654 15..669 99   Minus
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 00:01:55 Download gff for BO04051.3prime
Subject Subject Range Query Range Percent Splice Strand
CG15735-PA 1..654 15..669 99   Minus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-22 20:46:18 Download gff for BO04051.3prime
Subject Subject Range Query Range Percent Splice Strand
CG15735-RA 542..1195 15..669 99   Minus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-11 04:47:48 Download gff for BO04051.3prime
Subject Subject Range Query Range Percent Splice Strand
CG15735-RA 542..1195 15..669 99   Minus
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-11 04:47:48 Download gff for BO04051.3prime
Subject Subject Range Query Range Percent Splice Strand
X 12019181..12019325 525..669 100 -> Minus
X 12019628..12019758 394..524 100 -> Minus
X 12019825..12019941 277..393 100 -> Minus
X 12020007..12020138 145..276 100 -> Minus
X 12020535..12020663 15..144 98   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-22 20:46:18 Download gff for BO04051.3prime
Subject Subject Range Query Range Percent Splice Strand
arm_X 11913214..11913358 525..669 100 -> Minus
arm_X 11913661..11913791 394..524 100 -> Minus
arm_X 11913858..11913974 277..393 100 -> Minus
arm_X 11914040..11914171 145..276 100 -> Minus
arm_X 11914568..11914696 15..144 98   Minus

BO04051.5prime Sequence

683 bp (682 high quality bases) assembled on 2005-12-01

> BO04051.5prime
GAAGTTATCAGTCGACATGGCCGCTGCCGCTGCGAGCGCAGTGAATGCAG
TGAACGACTGCTTCAGCATCGGATCCACAGTCGTCTGTACGACCTGTTTC
AACGAGGAGGTGGAGGGCGAGGTGCTGGCCTTCGATCACAACACAAAGAT
GCTTATCCTGAAATGCCGATCCAAGTCCACGGAGGAGCTGAGTGATATCT
ACGCGATGAACCTCTCGCTCTGCAGCAACGTGCAGGTGATCAAGGAGTGC
AACGGCAACTTTGATGATCCGCAAAAGCTTAATCTGGAACAGGTCAAAAT
GCGTCTGAGGAAAACAGTTGAGCGAAGACAGGACTACTTGAAGTCTAAGA
ATGCTGATGTCAGTCCAGAGGCGCAGGAACTCTATAGAGCGATAGCCAAA
CAATACGGGTACAATGAAGTCTCCTGGCAAGGACTTAACATACAGATCCT
AAATGAAGTCACCATCTCGCCGCCGTACCGAGTGGACAACGTGGTGTCCA
GCTCGAACAACGAAACTTCATGCAACTACATCAAGCGCATCATCAAACAG
TTCTTCAACACGAGGCCATCGCCCGTCCCGGAAAGCGGAGCTGCGGCCAG
CACCTCGTCACCATCGGTGTCTCCCACGTCCTCATCTCTTGCATCTGGAT
CGCCGGTTCCCGCAAACGCAAGCTTTCTAGACC

BO04051.5prime Blast Records

Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 11:57:37
Subject Length Description Subject Range Query Range Score Percent Strand
CG15735-PA 654 CG15735-RA 1..651 17..667 3255 100 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-10 16:40:23
Subject Length Description Subject Range Query Range Score Percent Strand
CG15735-RA 1251 CG15735-RA 542..1192 17..667 3255 100 Plus
Blast to na_all.dmel.RELEASE6 performed 2015-02-10 16:40:15
Subject Length Description Subject Range Query Range Score Percent Strand
X 23542271 X 12019181..12019325 17..161 725 100 Plus
X 23542271 X 12019628..12019760 162..294 665 100 Plus
X 23542271 X 12020006..12020138 409..541 665 100 Plus
X 23542271 X 12020535..12020660 542..667 630 100 Plus
X 23542271 X 12019821..12019941 289..409 605 100 Plus
Blast to na_te.dros performed 2015-02-10 16:40:19
Subject Length Description Subject Range Query Range Score Percent Strand
Dvir\Ulysses 10653 Dvir\Ulysses DVULYSS 10653bp AKA(S37633) Derived from X56645 (Rel. 38, Last updated, Version 6). 4845..4904 625..565 113 67.2 Minus

BO04051.5prime Sim4 Records

Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 01:53:22 Download gff for BO04051.5prime
Subject Subject Range Query Range Percent Splice Strand
CG15735-PA 1..654 17..671 99   Plus
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 00:01:56 Download gff for BO04051.5prime
Subject Subject Range Query Range Percent Splice Strand
CG15735-PA 1..654 17..671 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-15 02:39:36 Download gff for BO04051.5prime
Subject Subject Range Query Range Percent Splice Strand
CG15735-RA 542..1195 17..671 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-10 18:24:13 Download gff for BO04051.5prime
Subject Subject Range Query Range Percent Splice Strand
CG15735-RA 542..1195 17..671 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-10 18:24:13 Download gff for BO04051.5prime
Subject Subject Range Query Range Percent Splice Strand
X 12019181..12019325 17..161 100 -> Plus
X 12019628..12019758 162..292 100 -> Plus
X 12019825..12019941 293..409 100 -> Plus
X 12020007..12020138 410..541 100 -> Plus
X 12020535..12020663 542..671 98   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-15 02:39:36 Download gff for BO04051.5prime
Subject Subject Range Query Range Percent Splice Strand
arm_X 11913661..11913791 162..292 100 -> Plus
arm_X 11913214..11913358 17..161 100 -> Plus
arm_X 11913858..11913974 293..409 100 -> Plus
arm_X 11914040..11914171 410..541 100 -> Plus
arm_X 11914568..11914696 542..671 98   Plus

BO04051.complete Sequence

685 bp (685 high quality bases) assembled on 2005-10-17

GenBank Submission: FJ629616

> BO04051.complete
GAAGTTATCAGTCGACATGGCCGCTGCCGCTGCGAGCGCAGTGAATGCAG
TGAACGACTGCTTCAGCATCGGATCCACAGTCGTCTGTACGACCTGTTTC
AACGAGGAGGTGGAGGGCGAGGTGCTGGCCTTCGATCACAACACAAAGAT
GCTTATCCTGAAATGCCGATCCAAGTCCACGGAGGAGCTGAGTGATATCT
ACGCGATGAACCTCTCGCTCTGCAGCAACGTGCAGGTGATCAAGGAGTGC
AACGGCAACTTTGATGATCCGCAAAAGCTTAATCTGGAACAGGTCAAAAT
GCGTCTGAGGAAAACAGTTGAGCGAAGACAGGACTACTTGAAGTCTAAGA
ATGCTGATGTCAGTCCAGAGGCGCAGGAACTCTATAGAGCGATAGCCAAA
CAATACGGGTACAATGAAGTCTCCTGGCAAGGACTTAACATACAGATCCT
AAATGAAGTCACCATCTCGCCGCCGTACCGAGTGGACAACGTGGTGTCCA
GCTCGAACAACGAAACTTCATGCAACTACATCAAGCGCATCATCAAACAG
TTCTTCAACACGAGGCCATCGCCCGTCCCGGAAAGCGGAGCTGCGGCCAG
CACCTCGTCACCATCGGTGTCTCCCACGTCCTCATCTCTTGCATCTGGAT
CGCCGGTTCCCGCAAACGCAAGCTTTCTAGACCAT

BO04051.complete Blast Records

Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-27 23:41:17
Subject Length Description Subject Range Query Range Score Percent Strand
CG15735-RA 654 CG15735-PA 1..651 17..667 3255 100 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 23:41:18
Subject Length Description Subject Range Query Range Score Percent Strand
CG15735-RA 1251 CG15735-RA 542..1192 17..667 3255 100 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 23:41:15
Subject Length Description Subject Range Query Range Score Percent Strand
X 23542271 X 12019181..12019325 17..161 725 100 Plus
X 23542271 X 12019628..12019760 162..294 665 100 Plus
X 23542271 X 12020006..12020138 409..541 665 100 Plus
X 23542271 X 12020535..12020660 542..667 630 100 Plus
X 23542271 X 12019821..12019941 289..409 605 100 Plus
Blast to na_te.dros performed 2014-11-27 23:41:16
Subject Length Description Subject Range Query Range Score Percent Strand
Dvir\Ulysses 10653 Dvir\Ulysses DVULYSS 10653bp AKA(S37633) Derived from X56645 (Rel. 38, Last updated, Version 6). 4845..4904 625..565 113 67.2 Minus

BO04051.complete Sim4 Records

Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-21 22:33:43 Download gff for BO04051.complete
Subject Subject Range Query Range Percent Splice Strand
CG15735-RA 1..654 17..671 99   Plus
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-11 07:01:08 Download gff for BO04051.complete
Subject Subject Range Query Range Percent Splice Strand
CG15735-RA 538..1191 17..671 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 19:35:26 Download gff for BO04051.complete
Subject Subject Range Query Range Percent Splice Strand
CG15735-RA 542..1192 17..669 99   Plus
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 22:33:43 Download gff for BO04051.complete
Subject Subject Range Query Range Percent Splice Strand
CG15735-RA 538..1191 17..671 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 01:06:09 Download gff for BO04051.complete
Subject Subject Range Query Range Percent Splice Strand
CG15735-RA 542..1192 17..669 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 01:06:09 Download gff for BO04051.complete
Subject Subject Range Query Range Percent Splice Strand
X 12019181..12019325 17..161 100 -> Plus
X 12019628..12019758 162..292 100 -> Plus
X 12019825..12019941 293..409 100 -> Plus
X 12020007..12020138 410..541 100 -> Plus
X 12020535..12020660 542..669 98   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 19:35:26 Download gff for BO04051.complete
Subject Subject Range Query Range Percent Splice Strand
arm_X 11913214..11913358 17..161 100 -> Plus
arm_X 11913661..11913791 162..292 100 -> Plus
arm_X 11913858..11913974 293..409 100 -> Plus
arm_X 11914040..11914171 410..541 100 -> Plus
arm_X 11914568..11914693 542..669 98   Plus

BO04051.pep Sequence

Translation from 16 to 685

> BO04051.pep
MAAAAASAVNAVNDCFSIGSTVVCTTCFNEEVEGEVLAFDHNTKMLILKC
RSKSTEELSDIYAMNLSLCSNVQVIKECNGNFDDPQKLNLEQVKMRLRKT
VERRQDYLKSKNADVSPEAQELYRAIAKQYGYNEVSWQGLNIQILNEVTI
SPPYRVDNVVSSSNNETSCNYIKRIIKQFFNTRPSPVPESGAAASTSSPS
VSPTSSSLASGSPVPANASFLDH

BO04051.pep Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 19:35:38
Subject Length Description Subject Range Query Range Score Percent Strand
CG15735-PA 217 CG15735-PA 1..217 1..217 1108 100 Plus
CG14164-PB 186 CG14164-PB 1..181 9..179 260 30.4 Plus
CG14164-PA 186 CG14164-PA 1..181 9..179 260 30.4 Plus