Clone Sequence Records
BO04087.3prime Sequence
665 bp (664 high quality bases) assembled on 2005-12-01
> BO04087.3prime
ATGGTCTAGAAAGCTTGCTTTAAATAAGTTCGCTTTGTAATACGCAAGCT
CTTTGATGCTTTCTCGGATGTCGTCCAGACTACGATGCGTGAAAGATTTT
TTGGGAGCGGAATCCAGAATTGCGGGATGCCATCGCTTGGCCAGTTCCTT
GATGGTGGACACATCGACGATGCGGTAATGCAGGTAAGCATCTACCAATG
GCATGAATTTCATAATGAATAGTCGGTCGGTGTAGACGGAGTTCCCACCA
AGCGGACAGGCGCGCTTTGGTATGTTCTTCTCGAGATAGGATAGCACTAG
ATTGGAGGCTTCTTCGAGATTCACATCCGAGCTCTTGCATCGATCAATAA
GACCTGAATTGTAATGATGTTTCATGCACCACTCGTTCATCGAGTCGTAG
ACCTCCTGCGGATGGTTGATGGCAAAGCATGGTCCCTCCGACTTCACGTT
CAGGTCCTGGTCCGTAATGATGCAGGCCACCTCGAGGATTTTGTCCTTTT
CAATGTCCAGCCCGGTCATCTCCAAGTCCATCCACACGATGTCCGTGTCT
AAGCCACAGGTGCTGCTCATTCTGTCATTTGAATTGAATGCGATGTGGCT
CCGAATTTGGCGGTTCAGGGACAATCCGACGCGTCGAAGGTGAGCAAGCA
TGTCGACTGATAACT
BO04087.3prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 11:58:17
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG10214-PA | 636 | CG10214-RA | 1..633 | 651..19 | 3165 | 100 | Minus |
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-11 15:27:49
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG10214-RA | 970 | CG10214-RA | 91..723 | 651..19 | 3165 | 100 | Minus |
Blast to na_all.dmel.RELEASE6 performed 2015-02-11 15:27:47
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
3R | 32079331 | 3R | 23766766..23767398 | 19..651 | 3165 | 100 | Plus |
Blast to na_te.dros performed 2015-02-11 15:27:48
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
hobo | 2959 | hobo DMHFL1 2959bp Derived from M69216 (g157606) (Rel. 41, Last updated, Version 3). | 1376..1429 | 285..231 | 110 | 69.1 | Minus |
BO04087.3prime Sim4 Records
Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 01:54:13 Download gff for
BO04087.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG10214-PA | 1..636 | 15..651 | 99 | | Minus |
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 00:03:10 Download gff for
BO04087.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG10214-PA | 1..636 | 15..651 | 99 | | Minus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-25 19:32:05 Download gff for
BO04087.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG10214-RA | 82..729 | 11..659 | 98 | | Minus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-11 18:26:23 Download gff for
BO04087.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG10214-RA | 82..729 | 11..659 | 98 | | Minus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-11 18:26:23 Download gff for
BO04087.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
3R | 23766760..23767407 | 11..659 | 98 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-25 19:32:05 Download gff for
BO04087.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_3R | 19592482..19593129 | 11..659 | 98 | | Plus |
BO04087.5prime Sequence
665 bp (664 high quality bases) assembled on 2005-12-01
> BO04087.5prime
GAAGTTATCAGTCGACATGCTTGCTCACCTTCGACGCGTCGGATTGTCCC
TGAACCGCCAAATTCGGAGCCACATCGCATTCAATTCAAATGACAGAATG
AGCAGCACCTGTGGCTTAGACACGGACATCGTGTGGATGGACTTGGAGAT
GACCGGGCTGGACATTGAAAAGGACAAAATCCTCGAGGTGGCCTGCATCA
TTACGGACCAGGACCTGAACGTGAAGTCGGAGGGACCATGCTTTGCCATC
AACCATCCGCAGGAGGTCTACGACTCGATGAACGAGTGGTGCATGAAACA
TCATTACAATTCAGGTCTTATTGATCGATGCAAGAGCTCGGATGTGAATC
TCGAAGAAGCCTCCAATCTAGTGCTATCCTATCTCGAGAAGAACATACCA
AAGCGCGCCTGTCCGCTTGGTGGGAACTCCGTCTACACCGACCGACTATT
CATTATGAAATTCATGCCATTGGTAGATGCTTACCTGCATTACCGCATCG
TCGATGTGTCCACCATCAAGGAACTGGCCAAGCGATGGCATCCCGCAATT
CTGGATTCCGCTCCCAAAAAATCTTTCACGCATCGTAGTCTGGACGACAT
CCGAGAAAGCATCAAAGAGCTTGCGTATTACAAAGCGAACTTATTTAAAG
CAAGCTTTCTAGACC
BO04087.5prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 11:58:18
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG10214-PA | 636 | CG10214-RA | 1..633 | 17..649 | 3165 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-04 19:16:29
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG10214-RA | 970 | CG10214-RA | 91..723 | 17..649 | 3165 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2015-02-04 19:16:23
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
3R | 32079331 | 3R | 23766766..23767398 | 649..17 | 3165 | 100 | Minus |
Blast to na_te.dros performed 2015-02-04 19:16:26
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
hobo | 2959 | hobo DMHFL1 2959bp Derived from M69216 (g157606) (Rel. 41, Last updated, Version 3). | 1376..1429 | 383..437 | 110 | 69.1 | Plus |
BO04087.5prime Sim4 Records
Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 01:54:14 Download gff for
BO04087.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG10214-PA | 1..636 | 17..653 | 99 | | Plus |
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 00:03:11 Download gff for
BO04087.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG10214-PA | 1..636 | 17..653 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-10 21:15:23 Download gff for
BO04087.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG10214-RA | 82..729 | 9..657 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-04 21:30:28 Download gff for
BO04087.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG10214-RA | 82..729 | 9..657 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-04 21:30:28 Download gff for
BO04087.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
3R | 23766760..23767407 | 9..657 | 98 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-10 21:15:23 Download gff for
BO04087.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_3R | 19592482..19593129 | 9..657 | 98 | | Minus |
BO04087.complete Sequence
667 bp (667 high quality bases) assembled on 2005-09-08
GenBank Submission: FJ629637
> BO04087.complete
GAAGTTATCAGTCGACATGCTTGCTCACCTTCGACGCGTCGGATTGTCCC
TGAACCGCCAAATTCGGAGCCACATCGCATTCAATTCAAATGACAGAATG
AGCAGCACCTGTGGCTTAGACACGGACATCGTGTGGATGGACTTGGAGAT
GACCGGGCTGGACATTGAAAAGGACAAAATCCTCGAGGTGGCCTGCATCA
TTACGGACCAGGACCTGAACGTGAAGTCGGAGGGACCATGCTTTGCCATC
AACCATCCGCAGGAGGTCTACGACTCGATGAACGAGTGGTGCATGAAACA
TCATTACAATTCAGGTCTTATTGATCGATGCAAGAGCTCGGATGTGAATC
TCGAAGAAGCCTCCAATCTAGTGCTATCCTATCTCGAGAAGAACATACCA
AAGCGCGCCTGTCCGCTTGGTGGGAACTCCGTCTACACCGACCGACTATT
CATTATGAAATTCATGCCATTGGTAGATGCTTACCTGCATTACCGCATCG
TCGATGTGTCCACCATCAAGGAACTGGCCAAGCGATGGCATCCCGCAATT
CTGGATTCCGCTCCCAAAAAATCTTTCACGCATCGTAGTCTGGACGACAT
CCGAGAAAGCATCAAAGAGCTTGCGTATTACAAAGCGAACTTATTTAAAG
CAAGCTTTCTAGACCAT
BO04087.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-27 19:43:57
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG10214-RA | 636 | CG10214-PA | 1..633 | 17..649 | 3165 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 19:43:59
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG10214-RA | 970 | CG10214-RA | 91..723 | 17..649 | 3165 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 19:43:54
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
3R | 32079331 | 3R | 23766766..23767398 | 649..17 | 3165 | 100 | Minus |
Blast to na_te.dros performed 2014-11-27 19:43:56
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
hobo | 2959 | hobo DMHFL1 2959bp Derived from M69216 (g157606) (Rel. 41, Last updated, Version 3). | 1376..1429 | 383..437 | 110 | 69.1 | Plus |
BO04087.complete Sim4 Records
Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-21 22:25:31 Download gff for
BO04087.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG10214-RA | 1..636 | 17..653 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-11 06:50:17 Download gff for
BO04087.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG10214-RA | 46..693 | 9..657 | 98 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 18:58:34 Download gff for
BO04087.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG10214-RA | 91..723 | 17..651 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 22:25:31 Download gff for
BO04087.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG10214-RA | 46..693 | 9..657 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 21:07:17 Download gff for
BO04087.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG10214-RA | 91..723 | 17..651 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 21:07:17 Download gff for
BO04087.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
3R | 23766764..23767398 | 17..651 | 99 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 18:58:34 Download gff for
BO04087.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_3R | 19592486..19593120 | 17..651 | 99 | | Minus |
BO04087.pep Sequence
Translation from 16 to 667
> BO04087.pep
MLAHLRRVGLSLNRQIRSHIAFNSNDRMSSTCGLDTDIVWMDLEMTGLDI
EKDKILEVACIITDQDLNVKSEGPCFAINHPQEVYDSMNEWCMKHHYNSG
LIDRCKSSDVNLEEASNLVLSYLEKNIPKRACPLGGNSVYTDRLFIMKFM
PLVDAYLHYRIVDVSTIKELAKRWHPAILDSAPKKSFTHRSLDDIRESIK
ELAYYKANLFKASFLDH
BO04087.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 19:20:36
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG10214-PA | 211 | CG10214-PA | 1..211 | 1..211 | 1113 | 100 | Plus |