Clone BO04150 Report

Search the DGRC for BO04150

Clone and Library Details

Library:BO
Tissue Source:D. melanogaster
Created by:Joe Carlson
Date Registered:2004-06-03
Comments:Infusion clones with open reading frames
Original Plate Number:41
Well:50
Vector:pDNR-Dual
Associated Gene/Transcript
Protein status:BO04150.pep: validated full length
Sequenced Size:1117

Clone Sequence Records

BO04150.3prime Sequence

960 bp (867 high quality bases) assembled on 2005-12-01

> BO04150.3prime
ATGGTCTAGAAAGCTTGCTCGTATGGCCTGTGACATGTGCAATGGGGTCA
CCATTAGGGTAAGCTCCGCGTCCTTTAAATTTGCCCCACGCAAATTTGCC
TCCTGCAAGTCGCTGCCAGAAAGATTGCATTTTTCCAAGTCGGCACCTGC
TAACACCGCAGCTCGCAAATTACAGTTCTTCATATTGGCGTTCTTCAAAT
TTGCCACACGTAAGTTAACACCGGCCATGTTGCTGCTTTCCAAACATGCT
CCTTTGAGGTTAACACCCTCTAGATTAGTTCGAACTCCTGTTGGGTCTTC
AAAATTACACCCACGCAAGTTTGCACCTTCCATATTGGCGCAAAGTCCCC
GCACTGACACTAGTTGGGCACATTCCAAGTTTGCGTACTGAAGATCCGCC
CGTTCAAGACAGCAGTAGTTAAGATTGGTGTGGGACAAATTGCAGTGAGA
CATGTTGGCATACTTGAAGTTAATGTTGCGAAAATCTAGCTTTCGTAGAT
CGGCCCCAGACAGATTAACGCCTTGAAAGCGCAGCTCCGTTATCACGGAG
GTCTGAATGATGGCCTTGATGACGTCGTTGCGCGTCAATGGTCTGTCCCC
CAGCGGCGTCTCCTGCTGTCCCAGGCGTTCCTCCAAATGGGTGACAAGCG
AAAAGATTCCGAAGAACCGCGCCTCCTCCAAAACACCCAACACACTGATG
TTCGAATCGCATACGAATTGTCCGTGGCGGAGGTAGTTGATGATCGGCTC
GAAATATCGAGGACTTCGATCAATCAGGTATGCTCCCTGCTCGTCACGCT
CGCTGGGCTTCATGCTGCCATTTTGCAGGAACATCCTAGCAAGCATTGAA
TCCGGTTCTCTGCCCACCAGAGTGTCGATGGTAGTGGCGTAGATTTGTCC
CACCACGTTCAGTTTGACCCAACGATTGGGAGCGAATCCGCTAGCGGCGA
CAAAAATCGC

BO04150.3prime Blast Records

Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 11:59:18
Subject Length Description Subject Range Query Range Score Percent Strand
CG14647-PA 1095 CG14647-RA 160..1092 951..19 4615 99.7 Minus
CG41469-PA 303 CG41469-RA 1..187 23..209 935 100 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-11 15:28:31
Subject Length Description Subject Range Query Range Score Percent Strand
CG14647-RB 1178 CG14647-RB 137..1073 955..19 4640 99.7 Minus
CG9853-RB 1818 CG9853-RB 116..306 19..209 955 100 Plus
Blast to na_all.dmel.RELEASE6 performed 2015-02-11 15:28:29
Subject Length Description Subject Range Query Range Score Percent Strand
3R 32079331 3R 4400646..4401138 955..463 2420 99.4 Minus
3R 32079331 3R 4401600..4401912 331..19 1565 100 Minus
3R 32079331 3R 4401352..4401486 464..330 675 100 Minus
Blast to na_te.dros performed on 2015-02-11 15:28:30 has no hits.

BO04150.3prime Sim4 Records

Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 01:55:28 Download gff for BO04150.3prime
Subject Subject Range Query Range Percent Splice Strand
CG14647-PA 143..1086 16..960 99   Minus
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 00:04:58 Download gff for BO04150.3prime
Subject Subject Range Query Range Percent Splice Strand
CG14647-PA 152..1095 16..960 99   Minus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-25 19:32:17 Download gff for BO04150.3prime
Subject Subject Range Query Range Percent Splice Strand
CG14647-RB 133..1082 11..960 99   Minus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-11 18:26:44 Download gff for BO04150.3prime
Subject Subject Range Query Range Percent Splice Strand
CG14647-RB 133..1082 11..960 99   Minus
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-11 18:26:44 Download gff for BO04150.3prime
Subject Subject Range Query Range Percent Splice Strand
3R 4400642..4401138 463..960 99 -> Minus
3R 4401354..4401485 331..462 100 -> Minus
3R 4401601..4401919 13..330 98 -> Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-25 19:32:17 Download gff for BO04150.3prime
Subject Subject Range Query Range Percent Splice Strand
arm_3R 226364..226860 463..960 99 -> Minus
arm_3R 227076..227207 331..462 100 -> Minus
arm_3R 227323..227641 13..330 98 -> Minus

BO04150.5prime Sequence

889 bp (748 high quality bases) assembled on 2005-12-01

> BO04150.5prime
GAAGTTATCAGTCGACATGACGGGGGAAGAACGGGAAGATAAAGCAGCTG
AGAATTGCCAGGCATTGTGGAAATTTTTTAAACTTCCCAATCAAATGAAT
AGTGATCTGAAGGAGAGTGGTTCCGGAGCCAGAAAAGACGACGCCGCACC
GGCAGCCGGCGATTTCGTCGCCGCTAGCGGATTCGCTCCCAATCGTTGGG
TCAAACTGAACGTGGGTGGACAAATCTACGCCACTACCATCGACACTCTG
GTGGGCAGAGAACCGGATTCAATGCTTGCTAGGATGTTCCTGCAAAATGG
CAGCATGAAGCCCAGCGAGCGTGACGAGCAGGGAGCATACCTGATTGATC
GAAGTCCTCGATATTTCGAGCCGATCATCAACTACCTCCGCCACGGACAA
TTCGTATGCGATTCGAACATCAGTGTGTTGGGTGTTTTGGAGGAGGCGCG
GTTCTTCGGAATCTTTTCGCTTGTCACCCATTTGGAGGAACGCCTGGGAC
AGCAGGAGACGCCGCTGGGGGACAGACCATTGACGCGCAACGACGTCATC
AAGGCCATCATTCAGACCTCCGTGATAACGGAGCTGCGCTTTCAAGGCGT
TAATCTGTCTGGGGCCGATCTACGAAAGCTAGATTTTCGCAACATTAACT
TCAAGTATGCCAACATGTCTCACTGCAATTTGTCCCACACCAATCTTAAC
TACTGCTGTCTTGAACGGGCGGATCTTCAGTACGCAAACTTGGAATGTGC
CCAACTAGTGTCAGTGCGGGGACTTTGCGCCAATATGGAAGGTGCAAACT
TGCGTGGGTGTAATTTTGAAGACCCAACAGGAGTTCGAACTATTCTAGAG
GGGTGTAACCTCAAAGGAGCATGTTTGGAAAGCAGCAAC

BO04150.5prime Blast Records

Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 11:59:19
Subject Length Description Subject Range Query Range Score Percent Strand
CG14647-PA 1095 CG14647-RA 10..845 17..852 4155 99.8 Plus
CG14647-PA 1095 CG14647-RA 849..882 856..889 170 100 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-11 02:22:51
Subject Length Description Subject Range Query Range Score Percent Strand
CG14647-RB 1178 CG14647-RB 1..863 27..889 4255 99.7 Plus
Blast to na_all.dmel.RELEASE6 performed 2015-02-11 02:22:49
Subject Length Description Subject Range Query Range Score Percent Strand
3R 32079331 3R 4400500..4401138 17..655 3195 100 Plus
3R 32079331 3R 4401352..4401486 654..788 675 100 Plus
3R 32079331 3R 4401600..4401702 787..889 455 96.1 Plus
Blast to na_te.dros performed on 2015-02-11 02:22:50 has no hits.

BO04150.5prime Sim4 Records

Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 01:55:29 Download gff for BO04150.5prime
Subject Subject Range Query Range Percent Splice Strand
CG14647-PA 1..873 17..889 99   Plus
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 00:04:59 Download gff for BO04150.5prime
Subject Subject Range Query Range Percent Splice Strand
CG14647-PA 2..882 8..889 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-22 20:46:41 Download gff for BO04150.5prime
Subject Subject Range Query Range Percent Splice Strand
CG14647-RB 1..863 27..889 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-11 04:55:38 Download gff for BO04150.5prime
Subject Subject Range Query Range Percent Splice Strand
CG14647-RB 1..863 27..889 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-11 04:55:38 Download gff for BO04150.5prime
Subject Subject Range Query Range Percent Splice Strand
3R 4400491..4401138 5..655 99 -> Plus
3R 4401354..4401485 656..787 100 -> Plus
3R 4401601..4401702 788..889 97   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-22 20:46:41 Download gff for BO04150.5prime
Subject Subject Range Query Range Percent Splice Strand
arm_3R 227323..227424 788..889 97   Plus
arm_3R 226213..226860 5..655 99 -> Plus
arm_3R 227076..227207 656..787 100 -> Plus

BO04150.complete Sequence

1117 bp (1117 high quality bases) assembled on 2005-09-08

GenBank Submission: FJ629652

> BO04150.complete
GAAGTTATCAGTCGACATGACGGGGGAAGAACGGGAAGATAAAGCAGCTG
AGAATTGCCAGGCATTGTGGAAATTTTTTAAACTTCCCAATCAAATGAAT
AGTGATCTGAAGGAGAGTGGTTCCGGAGCCAGAAAAGACGACGCCGCACC
GGCAGCCGGCGATTTCGTCGCCGCTAGCGGATTCGCTCCCAATCGTTGGG
TCAAACTGAACGTGGGTGGACAAATCTACGCCACTACCATCGACACTCTG
GTGGGCAGAGAACCGGATTCAATGCTTGCTAGGATGTTCCTGCAAAATGG
CAGCATGAAGCCCAGCGAGCGTGACGAGCAGGGAGCATACCTGATTGATC
GAAGTCCTCGATATTTCGAGCCGATCATCAACTACCTCCGCCACGGACAA
TTCGTATGCGATTCGAACATCAGTGTGTTGGGTGTTTTGGAGGAGGCGCG
GTTCTTCGGAATCTTTTCGCTTGTCACCCATTTGGAGGAACGCCTGGGAC
AGCAGGAGACGCCGCTGGGGGACAGACCATTGACGCGCAACGACGTCATC
AAGGCCATCATTCAGACCTCCGTGATAACGGAGCTGCGCTTTCAAGGCGT
TAATCTGTCTGGGGCCGATCTACGAAAGCTAGATTTTCGCAACATTAACT
TCAAGTATGCCAACATGTCTCACTGCAATTTGTCCCACACCAATCTTAAC
TACTGCTGTCTTGAACGGGCGGATCTTCAGTACGCAAACTTGGAATGTGC
CCAACTAGTGTCAGTGCGGGGACTTTGCGCCAATATGGAAGGTGCAAACT
TGCGTGGGTGTAATTTTGAAGACCCAACAGGAGTTCGAACTAATCTAGAG
GGTGTTAACCTCAAAGGAGCATGTTTGGAAAGCAGCAACATGGCCGGTGT
TAACTTACGTGTGGCAAATTTGAAGAACGCCAATATGAAGAACTGTAATT
TGCGAGCTGCGGTGTTAGCAGGTGCCGACTTGGAAAAATGCAATCTTTCT
GGCAGCGACTTGCAGGAGGCAAATTTGCGTGGGGCAAATTTAAAGGACGC
GGAGCTTACCCTAATGGTGACCCCATTGCACATGTCACAGGCCATACGAG
CAAGCTTTCTAGACCAT

BO04150.complete Blast Records

Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 08:36:25
Subject Length Description Subject Range Query Range Score Percent Strand
CG14647-RB 1008 CG14647-PB 1..1005 95..1099 5025 100 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 08:36:26
Subject Length Description Subject Range Query Range Score Percent Strand
CG14647-RB 1178 CG14647-RB 1..1073 27..1099 5365 100 Plus
CG9853-RB 1818 CG9853-RB 116..306 1099..909 955 100 Minus
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 08:36:23
Subject Length Description Subject Range Query Range Score Percent Strand
3R 32079331 3R 4400500..4401138 17..655 3195 100 Plus
3R 32079331 3R 4401600..4401912 787..1099 1565 100 Plus
3R 32079331 3R 4401352..4401486 654..788 675 100 Plus
Blast to na_te.dros performed on 2014-11-28 08:36:24 has no hits.

BO04150.complete Sim4 Records

Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-21 22:42:30 Download gff for BO04150.complete
Subject Subject Range Query Range Percent Splice Strand
CG14647-RB 1..1008 95..1102 99   Plus
Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-07-28 16:59:46 Download gff for BO04150.complete
Subject Subject Range Query Range Percent Splice Strand
CG14647-RB 11..1093 17..1101 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:23:51 Download gff for BO04150.complete
Subject Subject Range Query Range Percent Splice Strand
CG14647-RB 1..1073 27..1101 99   Plus
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 22:42:31 Download gff for BO04150.complete
Subject Subject Range Query Range Percent Splice Strand
CG14647-RB 2..1102 5..1107 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 09:21:26 Download gff for BO04150.complete
Subject Subject Range Query Range Percent Splice Strand
CG14647-RB 1..1073 27..1101 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 09:21:26 Download gff for BO04150.complete
Subject Subject Range Query Range Percent Splice Strand
3R 4400500..4401138 17..655 100 -> Plus
3R 4401354..4401485 656..787 100 -> Plus
3R 4401601..4401912 788..1101 99   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:23:51 Download gff for BO04150.complete
Subject Subject Range Query Range Percent Splice Strand
arm_3R 226222..226860 17..655 100 -> Plus
arm_3R 227076..227207 656..787 100 -> Plus
arm_3R 227323..227634 788..1101 99   Plus

BO04150.pep Sequence

Translation from 16 to 1117

> BO04150.pep
MTGEEREDKAAENCQALWKFFKLPNQMNSDLKESGSGARKDDAAPAAGDF
VAASGFAPNRWVKLNVGGQIYATTIDTLVGREPDSMLARMFLQNGSMKPS
ERDEQGAYLIDRSPRYFEPIINYLRHGQFVCDSNISVLGVLEEARFFGIF
SLVTHLEERLGQQETPLGDRPLTRNDVIKAIIQTSVITELRFQGVNLSGA
DLRKLDFRNINFKYANMSHCNLSHTNLNYCCLERADLQYANLECAQLVSV
RGLCANMEGANLRGCNFEDPTGVRTNLEGVNLKGACLESSNMAGVNLRVA
NLKNANMKNCNLRAAVLAGADLEKCNLSGSDLQEANLRGANLKDAELTLM
VTPLHMSQAIRASFLDH

BO04150.pep Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 18:48:50
Subject Length Description Subject Range Query Range Score Percent Strand
CG14647-PB 335 CG14647-PB 1..335 27..361 1730 100 Plus
inc-PC 211 CG32810-PC 21..138 59..183 247 44 Plus
inc-PD 211 CG32810-PD 21..138 59..183 247 44 Plus
inc-PB 211 CG32810-PB 21..138 59..183 247 44 Plus
CG10465-PA 301 CG10465-PA 18..170 59..222 163 33.3 Plus