Clone Sequence Records
BO04201.3prime Sequence
943 bp (716 high quality bases) assembled on 2005-12-01
> BO04201.3prime
ATGGTCTAGAAAGCTTGCCGTGGAAAGTGTGAACGGTTCCTGGTGCACCA
CCTGACCCTCGATGCCGTAAAAGATGGTGCCATCCTGGACATATCCCCAC
GCCATGCGACGCGACGTGAAACTGATGCCCAGGTCACCGGAGTGGCCAAC
CACGATGGCGCCACCAGTGCCACCCAGCCGTTTGGTCATCTCGCGGCACT
CCTTGTCGGCGGCTGCCTGGGCGGACAGTCCCTGGTACTCCATGGCGGAC
AGAATGCGCTGGGCCAGATTGTAACGCATGAGGGTCTCGCCATGTCCGGT
GGTGGAGACGCCTCCACGGCAGTTATCCGCATAGGTGCCGCTGCCGAGAA
TGGGTGTGTCCCCAATGCGACCCGGCCACTTGCCGGTGATGCCGCCGGTG
GAGGTGCCCACCACTATTTGGCCCGATGCGTCCATGGCAACCGCTCCGAC
TGTTTCGCCACTGGGATCCGTTTTCGGCACCGGCTTGTCATCGGTCAGTT
CGGTGCGCGCGAAGAAGGGATCCTTGCCCTGGGCCACCTGATCCTCGAAT
TCCTTCAGCGTTAAGCGAGCCCCCTCGGTGACCAGTGCTCCCGGCTGCAG
TCGTTCGCTGCCCGTGGCTAGTGCCAGCTCCTGGGCCGCTGCGCCGCCAA
GAAAGGTGTGTCGCTGCTTCTCCATCAGGCGACGCGCCACTGTAATCGGG
TGCATCACATCCCGCAGCAGGGTTATGCAGCCGGCTCGCAAGTCGCGGCC
CTCCATTAAACTGGCCTCTAGCTCCACCTGGCCACTGGTGTTCAGGCAGG
AGCCGTAGCCGGCGTTGAAGTTCTCGTCCAGCTCCATGCTGCGCACCGCC
GCCTCTACGGCATCCAGGGCACTGCCTCCGCCGCTGCCATTGTCCGGACT
CAGTAGCCCCCAGGCGGAGCGCAGTGCCTGCTTAATGCCCGCG
BO04201.3prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 12:00:05
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG7860-PA | 999 | CG7860-RA | 72..996 | 943..19 | 4625 | 100 | Minus |
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-13 13:13:36
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG7860-RB | 1204 | CG7860-RB | 151..1075 | 943..19 | 4625 | 100 | Minus |
CG7860-RA | 1377 | CG7860-RA | 324..1248 | 943..19 | 4625 | 100 | Minus |
Blast to na_all.dmel.RELEASE6 performed 2015-02-13 13:13:34
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
X | 23542271 | X | 15569316..15570240 | 943..19 | 4625 | 100 | Minus |
Blast to na_te.dros performed on 2015-02-13 13:13:35 has no hits.
BO04201.3prime Sim4 Records
Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 01:56:28 Download gff for
BO04201.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG7860-PA | 72..999 | 15..943 | 99 | | Minus |
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 00:06:23 Download gff for
BO04201.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG7860-PA | 72..999 | 15..943 | 99 | | Minus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-09-02 17:40:19 Download gff for
BO04201.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG7860-RA | 324..1253 | 12..943 | 99 | | Minus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-13 15:42:43 Download gff for
BO04201.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG7860-RA | 324..1253 | 12..943 | 99 | | Minus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-13 15:42:43 Download gff for
BO04201.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
X | 15569316..15570245 | 12..943 | 99 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-09-02 17:40:19 Download gff for
BO04201.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_X | 15463349..15464278 | 12..943 | 99 | | Minus |
BO04201.5prime Sequence
898 bp (788 high quality bases) assembled on 2005-12-01
> BO04201.5prime
GAAGTTATCAGTCGACATGCCACGCCCAGTTCTGCTCATTCACGGTGGAG
CCGGTGATATATCGGACTCCAGGATAGCGGGCAAGTTCGCGGGCATTAAG
CAGGCACTGCGCTCCGCCTGGGGGCTACTGAGTCCGGACAATGGCAGCGG
CGGAGGCAGTGCCCTGGATGCCGTAGAGGCGGCGGTGCGCAGCATGGAGC
TGGACGAGAACTTCAACGCCGGCTACGGCTCCTGCCTGAACACCAGTGGC
CAGGTGGAGCTAGAGGCCAGTTTAATGGAGGGCCGCGACTTGCGAGCCGG
CTGCATAACCCTGCTGCGGGATGTGATGCACCCGATTACAGTGGCGCGTC
GCCTGATGGAGAAGCAGCGACACACCTTTCTTGGCGGCGCAGCGGCCCAG
GAGCTGGCACTAGCCACGGGCAGCGAACGACTGCAGCCGGGAGCACTGGT
CACCGAGGGGGCTCGCTTAACGCTGAAGGAATTCGAGGATCAGGTGGCCC
AGGGCAAGGATCCCTTCTTCGCGCGCACCGAACTGACCGATGACAAGCCG
GTGCCGAAAACGGATCCCAGTGGCGAAACAGTCGGAGCGGTTGCCATGGA
CGCATCGGGCCAAATAGTGGTGGGCACCTCCACCGGCGGCATCACCGGCA
AGTGGCCGGGTCGCATTGGGGACACACCCATTCTCGGCAGCGGCACCTAT
GCGGATAACTGCCGTGGAGGCGTCTCCACCACCGGACATGGCGAGACCCT
CATGCGTTACAATCTGGCCCAGCGCATTCTGTCCGCCATGGAGTACCAGG
GACTGTCCGCCCAGGCAGCCGCCGACAAGGAGTGCCGCGAGATGACCAAA
CGGCTGGGTGGCACTGGTGGCGCCATCGTGGTTGGGCACTCCGGTGAC
BO04201.5prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 12:00:05
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG7860-PA | 999 | CG7860-RA | 1..882 | 17..898 | 4385 | 99.8 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-11 04:40:34
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG7860-RB | 1204 | CG7860-RB | 75..961 | 12..898 | 4405 | 99.8 | Plus |
CG7860-RA | 1377 | CG7860-RA | 248..1134 | 12..898 | 4405 | 99.8 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2015-02-11 04:40:29
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
X | 23542271 | X | 15569240..15570126 | 12..898 | 4405 | 99.8 | Plus |
Blast to na_te.dros performed on 2015-02-11 04:40:32 has no hits.
BO04201.5prime Sim4 Records
Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 01:56:29 Download gff for
BO04201.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG7860-PA | 1..882 | 17..898 | 99 | | Plus |
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 00:06:25 Download gff for
BO04201.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG7860-PA | 1..882 | 17..898 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-23 06:11:54 Download gff for
BO04201.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG7860-RA | 240..1134 | 1..898 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-11 09:14:29 Download gff for
BO04201.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG7860-RA | 240..1134 | 1..898 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-11 09:14:29 Download gff for
BO04201.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
X | 15569232..15570126 | 1..898 | 99 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-23 06:11:54 Download gff for
BO04201.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_X | 15463265..15464159 | 1..898 | 99 | | Plus |
BO04201.complete Sequence
1030 bp (1030 high quality bases) assembled on 2005-09-08
GenBank Submission: FJ629656
> BO04201.complete
GAAGTTATCAGTCGACATGCCACGCCCAGTTCTGCTCATTCACGGTGGAG
CCGGTGATATATCGGACTCCAGGATAGCGGGCAAGTTCGCGGGCATTAAG
CAGGCACTGCGCTCCGCCTGGGGGCTACTGAGTCCGGACAATGGCAGCGG
CGGAGGCAGTGCCCTGGATGCCGTAGAGGCGGCGGTGCGCAGCATGGAGC
TGGACGAGAACTTCAACGCCGGCTACGGCTCCTGCCTGAACACCAGTGGC
CAGGTGGAGCTAGAGGCCAGTTTAATGGAGGGCCGCGACTTGCGAGCCGG
CTGCATAACCCTGCTGCGGGATGTGATGCACCCGATTACAGTGGCGCGTC
GCCTGATGGAGAAGCAGCGACACACCTTTCTTGGCGGCGCAGCGGCCCAG
GAGCTGGCACTAGCCACGGGCAGCGAACGACTGCAGCCGGGAGCACTGGT
CACCGAGGGGGCTCGCTTAACGCTGAAGGAATTCGAGGATCAGGTGGCCC
AGGGCAAGGATCCCTTCTTCGCGCGCACCGAACTGACCGATGACAAGCCG
GTGCCGAAAACGGATCCCAGTGGCGAAACAGTCGGAGCGGTTGCCATGGA
CGCATCGGGCCAAATAGTGGTGGGCACCTCCACCGGCGGCATCACCGGCA
AGTGGCCGGGTCGCATTGGGGACACACCCATTCTCGGCAGCGGCACCTAT
GCGGATAACTGCCGTGGAGGCGTCTCCACCACCGGACATGGCGAGACCCT
CATGCGTTACAATCTGGCCCAGCGCATTCTGTCCGCCATGGAGTACCAGG
GACTGTCCGCCCAGGCAGCCGCCGACAAGGAGTGCCGCGAGATGACCAAA
CGGCTGGGTGGCACTGGTGGCGCCATCGTGGTTGGCCACTCCGGTGACCT
GGGCATCAGTTTCACGTCGCGTCGCATGGCGTGGGGATATGTCCAGGATG
GCACCATCTTTTACGGCATCGAGGGTCAGGTGGTGCACCAGGAACCGTTC
ACACTTTCCACGGCAAGCTTTCTAGACCAT
BO04201.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-26 21:56:21
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG7860-RB | 999 | CG7860-PB | 1..996 | 17..1012 | 4980 | 100 | Plus |
CG7860-RA | 999 | CG7860-PA | 1..996 | 17..1012 | 4980 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-26 21:56:22
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG7860-RB | 1204 | CG7860-RB | 75..1075 | 12..1012 | 4990 | 99.9 | Plus |
CG7860-RA | 1377 | CG7860-RA | 248..1248 | 12..1012 | 4990 | 99.9 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-26 21:56:20
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
X | 23542271 | X | 15569240..15570240 | 12..1012 | 4990 | 99.9 | Plus |
Blast to na_te.dros performed on 2014-11-26 21:56:20 has no hits.
BO04201.complete Sim4 Records
Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-21 22:42:05 Download gff for
BO04201.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG7860-RA | 1..999 | 17..1016 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-11 07:11:56 Download gff for
BO04201.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG7860-RA | 240..1253 | 1..1019 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 03:41:26 Download gff for
BO04201.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG7860-RA | 253..1248 | 17..1014 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 22:42:05 Download gff for
BO04201.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG7860-RA | 240..1253 | 1..1019 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 22:46:21 Download gff for
BO04201.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG7860-RA | 253..1248 | 17..1014 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-26 22:46:21 Download gff for
BO04201.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
X | 15569245..15570240 | 17..1014 | 99 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 03:41:26 Download gff for
BO04201.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_X | 15463278..15464273 | 17..1014 | 99 | | Plus |
BO04201.pep Sequence
Translation from 16 to 1030
> BO04201.pep
MPRPVLLIHGGAGDISDSRIAGKFAGIKQALRSAWGLLSPDNGSGGGSAL
DAVEAAVRSMELDENFNAGYGSCLNTSGQVELEASLMEGRDLRAGCITLL
RDVMHPITVARRLMEKQRHTFLGGAAAQELALATGSERLQPGALVTEGAR
LTLKEFEDQVAQGKDPFFARTELTDDKPVPKTDPSGETVGAVAMDASGQI
VVGTSTGGITGKWPGRIGDTPILGSGTYADNCRGGVSTTGHGETLMRYNL
AQRILSAMEYQGLSAQAAADKECREMTKRLGGTGGAIVVGHSGDLGISFT
SRRMAWGYVQDGTIFYGIEGQVVHQEPFTLSTASFLDH
BO04201.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 18:49:27
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG7860-PB | 332 | CG7860-PB | 1..332 | 1..332 | 1709 | 100 | Plus |
CG7860-PA | 332 | CG7860-PA | 1..332 | 1..332 | 1709 | 100 | Plus |
Taspase1-PB | 365 | CG5241-PB | 7..264 | 8..254 | 287 | 32.6 | Plus |
Taspase1-PA | 365 | CG5241-PA | 7..264 | 8..254 | 287 | 32.6 | Plus |
CG1827-PD | 393 | CG1827-PD | 72..351 | 34..296 | 263 | 29.4 | Plus |