Clone Sequence Records
BO04203.3prime Sequence
656 bp (655 high quality bases) assembled on 2005-12-01
> BO04203.3prime
ATGGTCTAGAAAGCTTGCCTTGTCCTTGCCGTTGGGTGCTCCGTTCTCCT
TGCCCTTCACCTCGCTTTCATTTGCCTTAACGTTGAGGTGAGCGGGTCCC
ACTTGCTGAATTTGAATGATGCGCTCCTTGGACTTGTCCTCGACGGCCTG
CGGCTTGGGAATACTGACGGTGAGCACGCCATCCGACGACAGCTGCGAGA
CCACTTGCTCCGCCTTGTAGCCATCGGGAACCTTGTAGCGGCGCACAAAG
TGGCGCATGATGTGACCATGGTCGTCCTGGCGTTCCTCATGCTTGCCCTC
GACCAAGATGGAGTCGTCCACCACCTTCACGTTGAGCTCACTGGGCTTGA
ACTGGGCGACGTCCATGCACACCTGGAATCCATCCTTGCCCACATGGGCG
GTTGCCGGCCAGTGAATGTCGTTGCGGTTGGCCATCTCGCGCCGCAAAGC
CAAAACCTGGCCGGCGGGCGACGATGGGCATATCGGCGATGCGCAAGGGC
ATCCGTTGATGGAACGGCGCTGCTGAGTGCCAAGGGGCAGCACGTAGCGG
GAATGCGGATGCAATCCCAGTCCAAGCTCGTAGATGGGGCTGCGGGGCTC
CTGGAGTTCATCCACAAGCGAAAGCAGAGTAGATAGCGACATGTCGACTG
ATAACT
BO04203.3prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 12:00:08
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG4183-PA | 627 | Hsp26-RA | 1..624 | 642..19 | 3120 | 100 | Minus |
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-13 15:11:30
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Hsp26-RB | 1010 | CG4183-RB | 240..863 | 642..19 | 3120 | 100 | Minus |
Hsp26-RA | 958 | CG4183-RA | 188..811 | 642..19 | 3120 | 100 | Minus |
Hsp23-RB | 884 | CG4463-RB | 318..630 | 387..75 | 350 | 74.5 | Minus |
Blast to na_all.dmel.RELEASE6 performed 2015-02-13 15:11:27
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
3L | 28110227 | 3L | 9376565..9377188 | 19..642 | 3120 | 100 | Plus |
3L | 28110227 | 3L | 9382199..9382511 | 387..75 | 335 | 73.8 | Minus |
3L | 28110227 | 3L | 9384438..9384590 | 393..241 | 330 | 81 | Minus |
Blast to na_te.dros performed on 2015-02-13 15:11:28 has no hits.
BO04203.3prime Sim4 Records
Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 01:56:31 Download gff for
BO04203.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
Hsp26-PA | 1..627 | 15..642 | 99 | | Minus |
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 00:06:29 Download gff for
BO04203.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG4183-PA | 1..627 | 15..642 | 99 | | Minus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-09-03 11:01:07 Download gff for
BO04203.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
Hsp26-RA | 182..816 | 14..648 | 99 | | Minus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-13 16:46:10 Download gff for
BO04203.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
Hsp26-RA | 182..816 | 14..648 | 99 | | Minus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-13 16:46:10 Download gff for
BO04203.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
3L | 9376560..9377194 | 14..648 | 99 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-09-03 11:01:07 Download gff for
BO04203.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_3L | 9369660..9370294 | 14..648 | 99 | | Plus |
BO04203.5prime Sequence
656 bp (655 high quality bases) assembled on 2005-12-01
> BO04203.5prime
GAAGTTATCAGTCGACATGTCGCTATCTACTCTGCTTTCGCTTGTGGATG
AACTCCAGGAGCCCCGCAGCCCCATCTACGAGCTTGGACTGGGATTGCAT
CCGCATTCCCGCTACGTGCTGCCCCTTGGCACTCAGCAGCGCCGTTCCAT
CAACGGATGCCCTTGCGCATCGCCGATATGCCCATCGTCGCCCGCCGGCC
AGGTTTTGGCTTTGCGGCGCGAGATGGCCAACCGCAACGACATTCACTGG
CCGGCAACCGCCCATGTGGGCAAGGATGGATTCCAGGTGTGCATGGACGT
CGCCCAGTTCAAGCCCAGTGAGCTCAACGTGAAGGTGGTGGACGACTCCA
TCTTGGTCGAGGGCAAGCATGAGGAACGCCAGGACGACCATGGTCACATC
ATGCGCCACTTTGTGCGCCGCTACAAGGTTCCCGATGGCTACAAGGCGGA
GCAAGTGGTCTCGCAGCTGTCGTCGGATGGCGTGCTCACCGTCAGTATTC
CCAAGCCGCAGGCCGTCGAGGACAAGTCCAAGGAGCGCATCATTCAAATT
CAGCAAGTGGGACCCGCTCACCTCAACGTTAAGGCAAATGAAAGCGAGGT
GAAGGGCAAGGAGAACGGAGCACCCAACGGCAAGGACAAGGCAAGCTTTC
TAGACC
BO04203.5prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 12:00:08
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG4183-PA | 627 | Hsp26-RA | 1..624 | 17..640 | 3120 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-12 06:15:50
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Hsp26-RB | 1010 | CG4183-RB | 240..863 | 17..640 | 3120 | 100 | Plus |
Hsp26-RA | 958 | CG4183-RA | 188..811 | 17..640 | 3120 | 100 | Plus |
Hsp23-RB | 884 | CG4463-RB | 318..630 | 272..584 | 350 | 74.5 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2015-02-12 06:15:40
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
3L | 28110227 | 3L | 9376565..9377188 | 640..17 | 3120 | 100 | Minus |
3L | 28110227 | 3L | 9382199..9382511 | 272..584 | 335 | 73.8 | Plus |
3L | 28110227 | 3L | 9384438..9384590 | 266..418 | 330 | 81 | Plus |
Blast to na_te.dros performed on 2015-02-12 06:15:45 has no hits.
BO04203.5prime Sim4 Records
Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 01:56:32 Download gff for
BO04203.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
Hsp26-PA | 1..627 | 17..644 | 99 | | Plus |
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 00:06:30 Download gff for
BO04203.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG4183-PA | 1..627 | 17..644 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-29 05:25:27 Download gff for
BO04203.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
Hsp26-RA | 182..816 | 11..645 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-12 07:58:04 Download gff for
BO04203.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
Hsp26-RA | 182..816 | 11..645 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-12 07:58:04 Download gff for
BO04203.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
3L | 9376560..9377194 | 11..645 | 99 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-29 05:25:27 Download gff for
BO04203.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_3L | 9369660..9370294 | 11..645 | 99 | | Minus |
BO04203.complete Sequence
658 bp (658 high quality bases) assembled on 2005-10-17
GenBank Submission: FJ629658
> BO04203.complete
GAAGTTATCAGTCGACATGTCGCTATCTACTCTGCTTTCGCTTGTGGATG
AACTCCAGGAGCCCCGCAGCCCCATCTACGAGCTTGGACTGGGATTGCAT
CCGCATTCCCGCTACGTGCTGCCCCTTGGCACTCAGCAGCGCCGTTCCAT
CAACGGATGCCCTTGCGCATCGCCGATATGCCCATCGTCGCCCGCCGGCC
AGGTTTTGGCTTTGCGGCGCGAGATGGCCAACCGCAACGACATTCACTGG
CCGGCAACCGCCCATGTGGGCAAGGATGGATTCCAGGTGTGCATGGACGT
CGCCCAGTTCAAGCCCAGTGAGCTCAACGTGAAGGTGGTGGACGACTCCA
TCTTGGTCGAGGGCAAGCATGAGGAACGCCAGGACGACCATGGTCACATC
ATGCGCCACTTTGTGCGCCGCTACAAGGTTCCCGATGGCTACAAGGCGGA
GCAAGTGGTCTCGCAGCTGTCGTCGGATGGCGTGCTCACCGTCAGTATTC
CCAAGCCGCAGGCCGTCGAGGACAAGTCCAAGGAGCGCATCATTCAAATT
CAGCAAGTGGGACCCGCTCACCTCAACGTTAAGGCAAATGAAAGCGAGGT
GAAGGGCAAGGAGAACGGAGCACCCAACGGCAAGGACAAGGCAAGCTTTC
TAGACCAT
BO04203.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-27 14:33:36
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Hsp26-RB | 627 | CG4183-PB | 1..624 | 17..640 | 3120 | 100 | Plus |
Hsp26-RA | 627 | CG4183-PA | 1..624 | 17..640 | 3120 | 100 | Plus |
Hsp23-RB | 561 | CG4463-PB | 202..514 | 272..584 | 335 | 73.8 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 14:33:37
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Hsp26-RB | 1010 | CG4183-RB | 240..863 | 17..640 | 3120 | 100 | Plus |
Hsp26-RA | 958 | CG4183-RA | 188..811 | 17..640 | 3120 | 100 | Plus |
Hsp23-RB | 884 | CG4463-RB | 318..630 | 272..584 | 335 | 73.8 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 14:33:34
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
3L | 28110227 | 3L | 9376565..9377188 | 640..17 | 3120 | 100 | Minus |
3L | 28110227 | 3L | 9382199..9382511 | 272..584 | 335 | 73.8 | Plus |
3L | 28110227 | 3L | 9384438..9384590 | 266..418 | 330 | 81 | Plus |
Blast to na_te.dros performed on 2014-11-27 14:33:35 has no hits.
BO04203.complete Sim4 Records
Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-21 22:33:21 Download gff for
BO04203.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
Hsp26-RA | 1..627 | 17..644 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-11 02:05:36 Download gff for
BO04203.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
Hsp26-RA | 234..868 | 11..645 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 17:46:25 Download gff for
BO04203.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
Hsp26-RA | 188..811 | 17..642 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 22:33:22 Download gff for
BO04203.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
Hsp26-RA | 234..868 | 11..645 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 15:14:16 Download gff for
BO04203.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
Hsp26-RA | 188..811 | 17..642 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 15:14:16 Download gff for
BO04203.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
3L | 9376563..9377188 | 17..642 | 99 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 17:46:25 Download gff for
BO04203.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_3L | 9369663..9370288 | 17..642 | 99 | | Minus |
BO04203.pep Sequence
Translation from 16 to 658
> BO04203.pep
MSLSTLLSLVDELQEPRSPIYELGLGLHPHSRYVLPLGTQQRRSINGCPC
ASPICPSSPAGQVLALRREMANRNDIHWPATAHVGKDGFQVCMDVAQFKP
SELNVKVVDDSILVEGKHEERQDDHGHIMRHFVRRYKVPDGYKAEQVVSQ
LSSDGVLTVSIPKPQAVEDKSKERIIQIQQVGPAHLNVKANESEVKGKEN
GAPNGKDKASFLDH
BO04203.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 19:35:55
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Hsp26-PB | 208 | CG4183-PB | 1..208 | 1..208 | 1089 | 100 | Plus |
Hsp26-PA | 208 | CG4183-PA | 1..208 | 1..208 | 1089 | 100 | Plus |
Hsp23-PB | 186 | CG4463-PB | 62..183 | 80..201 | 457 | 68.9 | Plus |
Hsp23-PA | 186 | CG4463-PA | 62..183 | 80..201 | 457 | 68.9 | Plus |
Hsp27-PB | 213 | CG4466-PB | 1..205 | 1..202 | 396 | 47 | Plus |