Clone Sequence Records
BO04204.3prime Sequence
422 bp (421 high quality bases) assembled on 2005-12-01
> BO04204.3prime
ATGGTCTAGAAAGCTTGCGAAGAAGAAGCCGAGAATTTTGCCTCCCAAAT
GTTTTCTCCTAGCCTCCTCGTGGTCCATGATGCCGCCAGAGGTGGTGAGC
ACAACGTAACCAAACTGACGCGAGGGCAACAGATTGTTGGTCCACTTCTC
GATGTCGTTGATGGGCGCATCGAAGCGGGGCGAGATGACGCCGCACTTGT
TTAGCCGACCGGTCAGGTTGACAACGATCTTGCCGGCACGGTGATCCTCG
ACGATCTCGAATTCGCCGATATAGCCATGCTTCATCATCACGGTCAGGAA
CTTGATGATCACCTTGGAGCAGGGACGCAGCAGCACCTGCCGCTTGCCAC
GCTTCTCGGCGTTGTTTATGCACTTCAGGGCATCGGCCAATACGTTCATA
CGCACCATGTCGACTGATAACT
BO04204.3prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 12:00:09
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG12324-PA | 393 | RpS15Ab-RA | 1..390 | 408..19 | 1950 | 100 | Minus |
CG2033-PC | 393 | RpS15Aa-RC | 1..390 | 408..19 | 1775 | 98.2 | Minus |
CG2033-PA | 393 | RpS15Aa-RA | 1..390 | 408..19 | 1775 | 98.2 | Minus |
CG2033-PD | 393 | RpS15Aa-RD | 1..390 | 408..19 | 1775 | 98.2 | Minus |
CG2033-PE | 393 | RpS15Aa-RE | 1..390 | 408..19 | 1775 | 98.2 | Minus |
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-04 19:18:40
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
RpS15Ab-RA | 724 | CG12324-RA | 138..527 | 408..19 | 1950 | 100 | Minus |
RpS15Aa-RF | 674 | CG2033-RF | 69..459 | 409..19 | 1850 | 98.2 | Minus |
RpS15Aa-RE | 741 | CG2033-RE | 136..526 | 409..19 | 1850 | 98.2 | Minus |
Blast to na_all.dmel.RELEASE6 performed 2015-02-04 19:18:34
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
2R | 25286936 | 2R | 10821813..10822202 | 408..19 | 1950 | 100 | Minus |
X | 23542271 | X | 13335988..13336378 | 19..409 | 1850 | 98.2 | Plus |
2L | 23513712 | 2L | 14747021..14747075 | 19..73 | 245 | 96.4 | Plus |
Blast to na_te.dros performed on 2015-02-04 19:18:37 has no hits.
BO04204.3prime Sim4 Records
Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 01:56:33 Download gff for
BO04204.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG12324-PA | 1..393 | 18..408 | 99 | | Minus |
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 00:06:32 Download gff for
BO04204.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG12324-PA | 1..393 | 18..408 | 99 | | Minus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-10 21:15:49 Download gff for
BO04204.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
RpS15Ab-RA | 133..527 | 19..416 | 98 | | Minus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-04 21:30:53 Download gff for
BO04204.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
RpS15Ab-RA | 133..527 | 19..416 | 98 | | Minus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-04 21:30:53 Download gff for
BO04204.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
2R | 10821808..10822202 | 19..416 | 98 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-10 21:15:49 Download gff for
BO04204.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_2R | 6709313..6709707 | 19..416 | 98 | | Minus |
BO04204.5prime Sequence
422 bp (421 high quality bases) assembled on 2005-12-01
> BO04204.5prime
GAAGTTATCAGTCGACATGGTGCGTATGAACGTATTGGCCGATGCCCTGA
AGTGCATAAACAACGCCGAGAAGCGTGGCAAGCGGCAGGTGCTGCTGCGT
CCCTGCTCCAAGGTGATCATCAAGTTCCTGACCGTGATGATGAAGCATGG
CTATATCGGCGAATTCGAGATCGTCGAGGATCACCGTGCCGGCAAGATCG
TTGTCAACCTGACCGGTCGGCTAAACAAGTGCGGCGTCATCTCGCCCCGC
TTCGATGCGCCCATCAACGACATCGAGAAGTGGACCAACAATCTGTTGCC
CTCGCGTCAGTTTGGTTACGTTGTGCTCACCACCTCTGGCGGCATCATGG
ACCACGAGGAGGCTAGGAGAAAACATTTGGGAGGCAAAATTCTCGGCTTC
TTCTTCGCAAGCTTTCTAGACC
BO04204.5prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 12:00:10
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG12324-PA | 393 | RpS15Ab-RA | 1..390 | 17..406 | 1950 | 100 | Plus |
CG2033-PC | 393 | RpS15Aa-RC | 1..390 | 17..406 | 1775 | 98.2 | Plus |
CG2033-PA | 393 | RpS15Aa-RA | 1..390 | 17..406 | 1775 | 98.2 | Plus |
CG2033-PD | 393 | RpS15Aa-RD | 1..390 | 17..406 | 1775 | 98.2 | Plus |
CG2033-PE | 393 | RpS15Aa-RE | 1..390 | 17..406 | 1775 | 98.2 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-12 10:54:56
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
RpS15Ab-RA | 724 | CG12324-RA | 138..527 | 17..406 | 1950 | 100 | Plus |
RpS15Aa-RF | 674 | CG2033-RF | 69..459 | 16..406 | 1850 | 98.2 | Plus |
RpS15Aa-RE | 741 | CG2033-RE | 136..526 | 16..406 | 1850 | 98.2 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2015-02-12 10:54:51
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
2R | 25286936 | 2R | 10821813..10822202 | 17..406 | 1950 | 100 | Plus |
X | 23542271 | X | 13335988..13336378 | 406..16 | 1850 | 98.2 | Minus |
2L | 23513712 | 2L | 14747021..14747075 | 406..352 | 245 | 96.4 | Minus |
Blast to na_te.dros performed on 2015-02-12 10:54:54 has no hits.
BO04204.5prime Sim4 Records
Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 01:56:34 Download gff for
BO04204.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG12324-PA | 1..393 | 17..407 | 99 | | Plus |
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 00:06:33 Download gff for
BO04204.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG12324-PA | 1..393 | 17..407 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-29 20:51:57 Download gff for
BO04204.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
RpS15Ab-RA | 133..527 | 9..406 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-12 13:24:20 Download gff for
BO04204.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
RpS15Ab-RA | 133..527 | 9..406 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-12 13:24:20 Download gff for
BO04204.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
2R | 10821808..10822202 | 9..406 | 98 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-29 20:51:57 Download gff for
BO04204.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_2R | 6709313..6709707 | 9..406 | 98 | | Plus |
BO04204.complete Sequence
424 bp (424 high quality bases) assembled on 2005-10-17
GenBank Submission: FJ629659
> BO04204.complete
GAAGTTATCAGTCGACATGGTGCGTATGAACGTATTGGCCGATGCCCTGA
AGTGCATAAACAACGCCGAGAAGCGTGGCAAGCGGCAGGTGCTGCTGCGT
CCCTGCTCCAAGGTGATCATCAAGTTCCTGACCGTGATGATGAAGCATGG
CTATATCGGCGAATTCGAGATCGTCGAGGATCACCGTGCCGGCAAGATCG
TTGTCAACCTGACCGGTCGGCTAAACAAGTGCGGCGTCATCTCGCCCCGC
TTCGATGCGCCCATCAACGACATCGAGAAGTGGACCAACAATCTGTTGCC
CTCGCGTCAGTTTGGTTACGTTGTGCTCACCACCTCTGGCGGCATCATGG
ACCACGAGGAGGCTAGGAGAAAACATTTGGGAGGCAAAATTCTCGGCTTC
TTCTTCGCAAGCTTTCTAGACCAT
BO04204.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-27 07:32:52
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
RpS15Ab-RA | 393 | CG12324-PA | 1..390 | 17..406 | 1950 | 100 | Plus |
RpS15Aa-RF | 393 | CG2033-PF | 1..390 | 17..406 | 1845 | 98.2 | Plus |
RpS15Aa-RE | 393 | CG2033-PE | 1..390 | 17..406 | 1845 | 98.2 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 07:32:53
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
RpS15Ab-RA | 724 | CG12324-RA | 138..527 | 17..406 | 1950 | 100 | Plus |
RpS15Aa-RF | 674 | CG2033-RF | 69..459 | 16..406 | 1850 | 98.2 | Plus |
RpS15Aa-RE | 741 | CG2033-RE | 136..526 | 16..406 | 1850 | 98.2 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 07:32:49
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
2R | 25286936 | 2R | 10821813..10822202 | 17..406 | 1950 | 100 | Plus |
X | 23542271 | X | 13335988..13336378 | 406..16 | 1850 | 98.2 | Minus |
2L | 23513712 | 2L | 14747021..14747075 | 406..352 | 245 | 96.4 | Minus |
Blast to na_te.dros performed on 2014-11-27 07:32:51 has no hits.
BO04204.complete Sim4 Records
Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-21 23:01:44 Download gff for
BO04204.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
RpS15Ab-RA | 1..393 | 17..407 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-11 07:34:02 Download gff for
BO04204.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
RpS15Ab-RA | 138..532 | 9..406 | 98 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 07:23:02 Download gff for
BO04204.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
RpS15Ab-RA | 138..527 | 17..408 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 23:01:44 Download gff for
BO04204.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
RpS15Ab-RA | 138..532 | 9..406 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 09:00:30 Download gff for
BO04204.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
RpS15Ab-RA | 138..527 | 17..408 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 09:00:30 Download gff for
BO04204.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
2R | 10821813..10822202 | 17..408 | 99 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 07:23:02 Download gff for
BO04204.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_2R | 6709318..6709707 | 17..408 | 99 | | Plus |
BO04204.pep Sequence
Translation from 16 to 424
> BO04204.pep
MVRMNVLADALKCINNAEKRGKRQVLLRPCSKVIIKFLTVMMKHGYIGEF
EIVEDHRAGKIVVNLTGRLNKCGVISPRFDAPINDIEKWTNNLLPSRQFG
YVVLTTSGGIMDHEEARRKHLGGKILGFFFASFLDH
BO04204.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 18:40:44
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
RpS15Ab-PA | 130 | CG12324-PA | 1..130 | 1..130 | 680 | 100 | Plus |
RpS15Aa-PF | 130 | CG2033-PF | 1..130 | 1..130 | 670 | 97.7 | Plus |
RpS15Aa-PE | 130 | CG2033-PE | 1..130 | 1..130 | 670 | 97.7 | Plus |
RpS15Aa-PD | 130 | CG2033-PD | 1..130 | 1..130 | 670 | 97.7 | Plus |
RpS15Aa-PA | 130 | CG2033-PA | 1..130 | 1..130 | 670 | 97.7 | Plus |