Clone Sequence Records
BO04233.3prime Sequence
506 bp (505 high quality bases) assembled on 2005-12-01
> BO04233.3prime
ATGGTCTAGAAAGCTTGCCTTCTTCTCCTCCTCCTCCGCCTCCTCCTCCT
CCTCCTCGTCCTCCTCGTTGAACTCGGTTCGCATCTGTTGCAGCGCTCTA
AGCTGCTGGCACAGCTGGTTGCCGAACGACTCGACGTAGCGGGGGCTGAT
CTTGTCCAGCAGCGCGTACGGCGTTTCAAATATCTCCTCCTCCTCGTCGT
CGCCTTGCTCTTGTCCGTTGCGAAGCAGTGCAGAGATCCGGCTGTCCTCG
TCTATGGTGTCGTACTGGGAGGAGACGATCTTGAAGCCACGACTGCTCAC
CTGAACGCAGCAAGTGGCGCTCTCGATAGTCCGGATGTTCAGGTAAATTT
GCGTGGCATCGCTTGCCAGTTTGGATGAGATGCAAATCTCAGCGACGTGA
GCCTTAACATCGTTAATTATGGCGTTGGCTTCGTCCTCGCAGTTGAAGGC
CTGCTCCTCCCCAGGGTCTGCGGTGGCTTTCGGTTCGCCCATGTCGACTG
ATAACT
BO04233.3prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 12:00:51
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG11523-PA | 477 | CG11523-RA | 1..474 | 492..19 | 2370 | 100 | Minus |
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-13 01:55:27
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG11523-RA | 874 | CG11523-RA | 126..599 | 492..19 | 2370 | 100 | Minus |
Blast to na_all.dmel.RELEASE6 performed 2015-02-13 01:55:21
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3L | 28110227 | 3L | 22266081..22266554 | 19..492 | 2370 | 100 | Plus |
Blast to na_te.dros performed on 2015-02-13 01:55:23 has no hits.
BO04233.3prime Sim4 Records
Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 01:57:24 Download gff for
BO04233.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG11523-PA | 1..477 | 16..492 | 99 | | Minus |
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 00:07:52 Download gff for
BO04233.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG11523-PA | 1..477 | 16..492 | 99 | | Minus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-09-01 06:33:25 Download gff for
BO04233.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG11523-RA | 126..599 | 19..492 | 100 | | Minus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-13 03:23:40 Download gff for
BO04233.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG11523-RA | 126..599 | 19..492 | 100 | | Minus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-13 03:23:40 Download gff for
BO04233.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3L | 22266081..22266554 | 19..492 | 100 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-09-01 06:33:25 Download gff for
BO04233.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3L | 22259181..22259654 | 19..492 | 100 | | Plus |
BO04233.5prime Sequence
506 bp (505 high quality bases) assembled on 2005-12-01
> BO04233.5prime
GAAGTTATCAGTCGACATGGGCGAACCGAAAGCCACCGCAGACCCTGGGG
AGGAGCAGGCCTTCAACTGCGAGGACGAAGCCAACGCCATAATTAACGAT
GTTAAGGCTCACGTCGCTGAGATTTGCATCTCATCCAAACTGGCAAGCGA
TGCCACGCAAATTTACCTGAACATCCGGACTATCGAGAGCGCCACTTGCT
GCGTTCAGGTGAGCAGTCGTGGCTTCAAGATCGTCTCCTCCCAGTACGAC
ACCATAGACGAGGACAGCCGGATCTCTGCACTGCTTCGCAACGGACAAGA
GCAAGGCGACGACGAGGAGGAGGAGATATTTGAAACGCCGTACGCGCTGC
TGGACAAGATCAGCCCCCGCTACGTCGAGTCGTTCGGCAACCAGCTGTGC
CAGCAGCTTAGAGCGCTGCAACAGATGCGAACCGAGTTCAACGAGGAGGA
CGAGGAGGAGGAGGAGGAGGCGGAGGAGGAGGAGAAGAAGGCAAGCTTTC
TAGACC
BO04233.5prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 12:00:52
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG11523-PA | 477 | CG11523-RA | 1..474 | 17..490 | 2370 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-04 19:19:38
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG11523-RA | 874 | CG11523-RA | 126..599 | 17..490 | 2370 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2015-02-04 19:19:33
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3L | 28110227 | 3L | 22266081..22266554 | 490..17 | 2370 | 100 | Minus |
Blast to na_te.dros performed on 2015-02-04 19:19:36 has no hits.
BO04233.5prime Sim4 Records
Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 01:57:25 Download gff for
BO04233.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG11523-PA | 1..477 | 17..493 | 99 | | Plus |
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 00:07:53 Download gff for
BO04233.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG11523-PA | 1..477 | 17..493 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-10 21:16:03 Download gff for
BO04233.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG11523-RA | 126..599 | 17..490 | 100 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-04 21:31:04 Download gff for
BO04233.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG11523-RA | 126..599 | 17..490 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-04 21:31:04 Download gff for
BO04233.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3L | 22266081..22266554 | 17..490 | 100 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-10 21:16:03 Download gff for
BO04233.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3L | 22259181..22259654 | 17..490 | 100 | | Minus |
BO04233.complete Sequence
508 bp (508 high quality bases) assembled on 2005-09-08
GenBank Submission: FJ629682
> BO04233.complete
GAAGTTATCAGTCGACATGGGCGAACCGAAAGCCACCGCAGACCCTGGGG
AGGAGCAGGCCTTCAACTGCGAGGACGAAGCCAACGCCATAATTAACGAT
GTTAAGGCTCACGTCGCTGAGATTTGCATCTCATCCAAACTGGCAAGCGA
TGCCACGCAAATTTACCTGAACATCCGGACTATCGAGAGCGCCACTTGCT
GCGTTCAGGTGAGCAGTCGTGGCTTCAAGATCGTCTCCTCCCAGTACGAC
ACCATAGACGAGGACAGCCGGATCTCTGCACTGCTTCGCAACGGACAAGA
GCAAGGCGACGACGAGGAGGAGGAGATATTTGAAACGCCGTACGCGCTGC
TGGACAAGATCAGCCCCCGCTACGTCGAGTCGTTCGGCAACCAGCTGTGC
CAGCAGCTTAGAGCGCTGCAACAGATGCGAACCGAGTTCAACGAGGAGGA
CGAGGAGGAGGAGGAGGAGGCGGAGGAGGAGGAGAAGAAGGCAAGCTTTC
TAGACCAT
BO04233.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-27 16:18:26
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG11523-RA | 477 | CG11523-PA | 1..474 | 17..490 | 2370 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 16:18:27
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG11523-RA | 874 | CG11523-RA | 126..599 | 17..490 | 2370 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 16:18:25
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3L | 28110227 | 3L | 22266081..22266554 | 490..17 | 2370 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-27 16:18:25 has no hits.
BO04233.complete Sim4 Records
Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-21 22:42:02 Download gff for
BO04233.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG11523-RA | 1..477 | 17..493 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-11 07:11:52 Download gff for
BO04233.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG11523-RA | 120..593 | 17..490 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 18:52:08 Download gff for
BO04233.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG11523-RA | 126..599 | 17..492 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 22:42:03 Download gff for
BO04233.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG11523-RA | 120..593 | 17..490 | 100 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 17:15:34 Download gff for
BO04233.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG11523-RA | 126..599 | 17..492 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 17:15:34 Download gff for
BO04233.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3L | 22266077..22266554 | 17..492 | 99 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 18:52:08 Download gff for
BO04233.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3L | 22259177..22259654 | 17..492 | 99 | | Minus |
BO04233.pep Sequence
Translation from 16 to 508
> BO04233.pep
MGEPKATADPGEEQAFNCEDEANAIINDVKAHVAEICISSKLASDATQIY
LNIRTIESATCCVQVSSRGFKIVSSQYDTIDEDSRISALLRNGQEQGDDE
EEEIFETPYALLDKISPRYVESFGNQLCQQLRALQQMRTEFNEEDEEEEE
EAEEEEKKASFLDH
BO04233.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 18:49:30
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG11523-PA | 158 | CG11523-PA | 1..158 | 1..158 | 805 | 100 | Plus |
