Clone Sequence Records
BO04249.3prime Sequence
701 bp (700 high quality bases) assembled on 2005-12-01
> BO04249.3prime
ATGGTCTAGAAAGCTTGCATTCGATGCGAAAGTGAAATTATACTCTCTGA
TGAAGGACTCAAATGTACGAGCACCATTGCCGTTGGCCTCCTCGTAGTAG
GGCAGCTTTTGGAGTCTCTTGAACCATGCAGCTATCCGAGGATATTTGGT
CGTGTCCACCTTTACGAAGACCTCCAACGAGGACACAGTTGATATGATAC
TAAAGTCGGCAATCGTAAGCTGATTGCCGGCGACGTAGTCATTTCCAGCA
AGGAATTTCTCCAGGAAGTCATAGACCTCAATAATCGCATCGTAACGCTC
CTTGGGAATCATCGTTTGCTTACCGGCGAAAAGTGGCTTGGTAATGCTTC
TCAGTGCATTAGCGAAGATCACTCCGGACTCGAAATGCAATCGCTGATCC
ACGACAGCACGCTGGAGGAGATCTTTCGGATAGAGACTGTCCGTTTTGCC
GTATTTGGACACCAGATAGGCAATAATGGCATGTGAGTCCCAGATATAAT
GTCCATCGTCCTCCAACGTGGGCACCGTGTGCTGTGGATTCTTCTTCAGA
AACTCCTCAGAGAAGTTTTCCTTGGCCCGAGTGTTTACCTCCACGAATTC
GTAGGGAACCTCCAGGGCAGCCAAGGTCAATTTGACGGCACGAACTGGTG
GACTTGCCTCCAAGCCGTACAGTATCAATTTGGGCATGTCGACTGATAAC
T
BO04249.3prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 12:01:11
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG17531-PA | 672 | GstE7-RA | 1..669 | 687..19 | 3345 | 100 | Minus |
CG17533-PA | 669 | GstE8-RA | 256..314 | 432..374 | 170 | 91.5 | Minus |
CG17533-PA | 669 | GstE8-RA | 144..206 | 544..482 | 140 | 88.8 | Minus |
CG17525-PA | 669 | GstE4-RA | 141..167 | 547..521 | 135 | 100 | Minus |
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-13 13:16:52
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
GstE7-RA | 765 | CG17531-RA | 32..700 | 687..19 | 3345 | 100 | Minus |
GstE8-RB | 1122 | CG17533-RB | 26..427 | 688..287 | 755 | 79.8 | Minus |
GstE8-RA | 758 | CG17533-RA | 26..427 | 688..287 | 755 | 79.8 | Minus |
Blast to na_all.dmel.RELEASE6 performed 2015-02-13 13:16:47
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
2R | 25286936 | 2R | 18406955..18407623 | 687..19 | 3345 | 100 | Minus |
2R | 25286936 | 2R | 18407859..18408260 | 688..287 | 735 | 78.9 | Minus |
2R | 25286936 | 2R | 18404667..18405121 | 654..200 | 565 | 74.9 | Minus |
2R | 25286936 | 2R | 18406179..18406652 | 550..77 | 480 | 73.4 | Minus |
2R | 25286936 | 2R | 18397152..18397321 | 374..543 | 250 | 76.5 | Plus |
2R | 25286936 | 2R | 18403415..18403599 | 547..363 | 205 | 74.1 | Minus |
Blast to na_te.dros performed on 2015-02-13 13:16:51 has no hits.
BO04249.3prime Sim4 Records
Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 01:57:51 Download gff for
BO04249.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
GstE7-PA | 1..672 | 15..687 | 99 | | Minus |
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 00:08:32 Download gff for
BO04249.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG17531-PA | 1..672 | 15..687 | 99 | | Minus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-09-02 17:40:45 Download gff for
BO04249.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
GstE7-RA | 32..703 | 15..687 | 99 | | Minus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-13 15:52:40 Download gff for
BO04249.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
GstE7-RA | 32..703 | 15..687 | 99 | | Minus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-13 15:52:40 Download gff for
BO04249.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
2R | 18406955..18407626 | 15..687 | 99 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-09-02 17:40:45 Download gff for
BO04249.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_2R | 14294460..14295131 | 15..687 | 99 | | Minus |
BO04249.5prime Sequence
701 bp (700 high quality bases) assembled on 2005-12-01
> BO04249.5prime
GAAGTTATCAGTCGACATGCCCAAATTGATACTGTACGGCTTGGAGGCAA
GTCCACCAGTTCGTGCCGTCAAATTGACCTTGGCTGCCCTGGAGGTTCCC
TACGAATTCGTGGAGGTAAACACTCGGGCCAAGGAAAACTTCTCTGAGGA
GTTTCTGAAGAAGAATCCACAGCACACGGTGCCCACGTTGGAGGACGATG
GACATTATATCTGGGACTCACATGCCATTATTGCCTATCTGGTGTCCAAA
TACGGCAAAACGGACAGTCTCTATCCGAAAGATCTCCTCCAGCGTGCTGT
CGTGGATCAGCGATTGCATTTCGAGTCCGGAGTGATCTTCGCTAATGCAC
TGAGAAGCATTACCAAGCCACTTTTCGCCGGTAAGCAAACGATGATTCCC
AAGGAGCGTTACGATGCGATTATTGAGGTCTATGACTTCCTGGAGAAATT
CCTTGCTGGAAATGACTACGTCGCCGGCAATCAGCTTACGATTGCCGACT
TTAGTATCATATCAACTGTGTCCTCGTTGGAGGTCTTCGTAAAGGTGGAC
ACGACCAAATATCCTCGGATAGCTGCATGGTTCAAGAGACTCCAAAAGCT
GCCCTACTACGAGGAGGCCAACGGCAATGGTGCTCGTACATTTGAGTCCT
TCATCAGAGAGTATAATTTCACTTTCGCATCGAATGCAAGCTTTCTAGAC
C
BO04249.5prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 12:01:11
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG17531-PA | 672 | GstE7-RA | 1..669 | 17..685 | 3345 | 100 | Plus |
CG17533-PA | 669 | GstE8-RA | 256..314 | 272..330 | 170 | 91.5 | Plus |
CG17533-PA | 669 | GstE8-RA | 144..206 | 160..222 | 140 | 88.8 | Plus |
CG17525-PA | 669 | GstE4-RA | 141..167 | 157..183 | 135 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-11 04:42:37
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
GstE7-RA | 765 | CG17531-RA | 32..700 | 17..685 | 3345 | 100 | Plus |
GstE8-RB | 1122 | CG17533-RB | 26..427 | 16..417 | 755 | 79.8 | Plus |
GstE8-RA | 758 | CG17533-RA | 26..427 | 16..417 | 755 | 79.8 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2015-02-11 04:42:29
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
2R | 25286936 | 2R | 18406955..18407623 | 17..685 | 3345 | 100 | Plus |
2R | 25286936 | 2R | 18407859..18408260 | 16..417 | 735 | 78.9 | Plus |
2R | 25286936 | 2R | 18404667..18405121 | 50..504 | 565 | 74.9 | Plus |
2R | 25286936 | 2R | 18406179..18406652 | 154..627 | 480 | 73.4 | Plus |
2R | 25286936 | 2R | 18397152..18397321 | 330..161 | 250 | 76.5 | Minus |
2R | 25286936 | 2R | 18403415..18403599 | 157..341 | 205 | 74.1 | Plus |
Blast to na_te.dros performed on 2015-02-11 04:42:36 has no hits.
BO04249.5prime Sim4 Records
Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 01:57:52 Download gff for
BO04249.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
GstE7-PA | 1..672 | 17..689 | 99 | | Plus |
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 00:08:33 Download gff for
BO04249.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG17531-PA | 1..672 | 17..689 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-23 06:12:13 Download gff for
BO04249.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
GstE7-RA | 32..703 | 17..689 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-11 09:18:08 Download gff for
BO04249.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
GstE7-RA | 32..703 | 17..689 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-11 09:18:08 Download gff for
BO04249.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
2R | 18406955..18407626 | 17..689 | 99 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-23 06:12:13 Download gff for
BO04249.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_2R | 14294460..14295131 | 17..689 | 99 | | Plus |
BO04249.complete Sequence
703 bp (703 high quality bases) assembled on 2005-10-17
GenBank Submission: FJ629692
> BO04249.complete
GAAGTTATCAGTCGACATGCCCAAATTGATACTGTACGGCTTGGAGGCAA
GTCCACCAGTTCGTGCCGTCAAATTGACCTTGGCTGCCCTGGAGGTTCCC
TACGAATTCGTGGAGGTAAACACTCGGGCCAAGGAAAACTTCTCTGAGGA
GTTTCTGAAGAAGAATCCACAGCACACGGTGCCCACGTTGGAGGACGATG
GACATTATATCTGGGACTCACATGCCATTATTGCCTATCTGGTGTCCAAA
TACGGCAAAACGGACAGTCTCTATCCGAAAGATCTCCTCCAGCGTGCTGT
CGTGGATCAGCGATTGCATTTCGAGTCCGGAGTGATCTTCGCTAATGCAC
TGAGAAGCATTACCAAGCCACTTTTCGCCGGTAAGCAAACGATGATTCCC
AAGGAGCGTTACGATGCGATTATTGAGGTCTATGACTTCCTGGAGAAATT
CCTTGCTGGAAATGACTACGTCGCCGGCAATCAGCTTACGATTGCCGACT
TTAGTATCATATCAACTGTGTCCTCGTTGGAGGTCTTCGTAAAGGTGGAC
ACGACCAAATATCCTCGGATAGCTGCATGGTTCAAGAGACTCCAAAAGCT
GCCCTACTACGAGGAGGCCAACGGCAATGGTGCTCGTACATTTGAGTCCT
TCATCAGAGAGTATAATTTCACTTTCGCATCGAATGCAAGCTTTCTAGAC
CAT
BO04249.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-27 06:55:46
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
GstE7-RA | 672 | CG17531-PA | 1..669 | 17..685 | 3345 | 100 | Plus |
GstE8-RB | 669 | CG17533-PB | 28..401 | 44..417 | 730 | 79.7 | Plus |
GstE8-RA | 669 | CG17533-PA | 28..401 | 44..417 | 730 | 79.7 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 06:55:47
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
GstE7-RA | 765 | CG17531-RA | 32..700 | 17..685 | 3345 | 100 | Plus |
GstE8-RB | 1122 | CG17533-RB | 26..427 | 16..417 | 735 | 78.9 | Plus |
GstE8-RA | 758 | CG17533-RA | 26..427 | 16..417 | 735 | 78.9 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 06:55:45
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
2R | 25286936 | 2R | 18406955..18407623 | 17..685 | 3345 | 100 | Plus |
2R | 25286936 | 2R | 18407859..18408260 | 16..417 | 735 | 78.9 | Plus |
2R | 25286936 | 2R | 18404667..18405121 | 50..504 | 565 | 74.9 | Plus |
2R | 25286936 | 2R | 18406179..18406652 | 154..627 | 480 | 73.4 | Plus |
2R | 25286936 | 2R | 18397152..18397321 | 330..161 | 250 | 76.5 | Minus |
2R | 25286936 | 2R | 18403415..18403599 | 157..341 | 205 | 74.1 | Plus |
Blast to na_te.dros performed on 2014-11-27 06:55:46 has no hits.
BO04249.complete Sim4 Records
Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-21 22:33:09 Download gff for
BO04249.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
GstE7-RA | 1..672 | 17..689 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-11 07:00:27 Download gff for
BO04249.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
GstE7-RA | 21..692 | 17..689 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 04:59:15 Download gff for
BO04249.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
GstE7-RA | 32..700 | 17..687 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 22:33:10 Download gff for
BO04249.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
GstE7-RA | 21..692 | 17..689 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 07:58:16 Download gff for
BO04249.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
GstE7-RA | 32..700 | 17..687 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 07:58:16 Download gff for
BO04249.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
2R | 18406955..18407623 | 17..687 | 99 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 04:59:15 Download gff for
BO04249.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_2R | 14294460..14295128 | 17..687 | 99 | | Plus |
BO04249.pep Sequence
Translation from 16 to 703
> BO04249.pep
MPKLILYGLEASPPVRAVKLTLAALEVPYEFVEVNTRAKENFSEEFLKKN
PQHTVPTLEDDGHYIWDSHAIIAYLVSKYGKTDSLYPKDLLQRAVVDQRL
HFESGVIFANALRSITKPLFAGKQTMIPKERYDAIIEVYDFLEKFLAGND
YVAGNQLTIADFSIISTVSSLEVFVKVDTTKYPRIAAWFKRLQKLPYYEE
ANGNGARTFESFIREYNFTFASNASFLDH
BO04249.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 19:37:59
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
GstE7-PA | 223 | CG17531-PA | 1..223 | 1..223 | 1148 | 100 | Plus |
GstE8-PB | 222 | CG17533-PB | 1..222 | 1..222 | 867 | 71.2 | Plus |
GstE8-PA | 222 | CG17533-PA | 1..222 | 1..222 | 867 | 71.2 | Plus |
GstE5-PA | 222 | CG17527-PA | 1..222 | 1..222 | 846 | 69.8 | Plus |
GstE6-PA | 222 | CG17530-PA | 1..220 | 1..220 | 826 | 70 | Plus |