Clone Sequence Records
BO04328.3prime Sequence
458 bp (457 high quality bases) assembled on 2005-12-01
> BO04328.3prime
ATGGTCTAGAAAGCTTGCCAGAGTTCCGGGGGCAGGGGCCACGTTCACGG
AGGTGGCAGAGTTGATGTGTCCGGCGAGGGGAGCGGTGTGGATGGCACCA
CGGGTCTTGGCCACATAGACGCCCTCATGGCCATGGCCGGCGGCGAGACC
GGGTCCCTGGGCCAGGTTGATTCCGGGAACAGCAGCGCCGTGCCATCCGG
CACCGGTCAGACCCCAGGGAGCAGCGCTGGCATGGACGGCAACGGCGGCA
GGGGCACCCCAGGGAGCACCGTTCCAGGCGCCGTTCCAGGCACCGTTCCA
GGCACCATTCCAGGCTCCGTTCCACAGACCGGCTCCATGGGCCACGGGGC
TCACATAGGACACACCGGGAGCGATCTGGGCCCACGAGGCATGAGCTCCA
GCCAGGGCGCACACGAACATGACTACGGCAACGGCGAACTTCATGTCGAC
TGATAACT
BO04328.3prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 12:02:55
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG7214-PA | 429 | CG7214-RA | 1..426 | 444..19 | 2130 | 100 | Minus |
CG7216-PA | 408 | Acp1-RA | 317..360 | 107..64 | 145 | 93.1 | Minus |
CG31904-PD | 1212 | CG31904-RD | 980..1023 | 107..64 | 145 | 93.1 | Minus |
CG31904-PB | 1212 | CG31904-RB | 980..1023 | 107..64 | 145 | 93.1 | Minus |
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-12 23:56:51
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG7214-RA | 1041 | CG7214-RA | 85..512 | 446..19 | 2140 | 100 | Minus |
Acp1-RA | 858 | CG7216-RA | 369..416 | 111..64 | 180 | 91.7 | Minus |
CG31904-RB | 3572 | CG31904-RB | 3087..3134 | 111..64 | 180 | 91.7 | Minus |
Blast to na_all.dmel.RELEASE6 performed 2015-02-12 23:56:47
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
2L | 23513712 | 2L | 7744211..7744632 | 19..440 | 2110 | 100 | Plus |
2L | 23513712 | 2L | 7734853..7734900 | 64..111 | 180 | 91.7 | Plus |
2L | 23513712 | 2L | 7741004..7741051 | 64..111 | 180 | 91.7 | Plus |
Blast to na_te.dros performed on 2015-02-12 23:56:49 has no hits.
BO04328.3prime Sim4 Records
Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 02:00:05 Download gff for
BO04328.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG7214-PA | 1..429 | 15..444 | 99 | | Minus |
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 00:11:49 Download gff for
BO04328.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG7214-PA | 1..429 | 15..444 | 99 | | Minus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-31 20:29:40 Download gff for
BO04328.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG7214-RA | 79..516 | 14..452 | 98 | | Minus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-13 02:38:42 Download gff for
BO04328.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG7214-RA | 79..516 | 14..452 | 98 | | Minus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-13 02:38:42 Download gff for
BO04328.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
2L | 7744207..7744632 | 14..440 | 99 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-31 20:29:40 Download gff for
BO04328.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_2L | 7744207..7744632 | 14..440 | 99 | | Plus |
BO04328.5prime Sequence
458 bp (457 high quality bases) assembled on 2005-11-29
> BO04328.5prime
GAAGTTATCAGTCGACATGAAGTTCGCCGTTGCCGTAGTCATGTTCGTGT
GCGCCCTGGCTGGAGCTCATGCCTCGTGGGCCCAGATCGCTCCCGGTGTG
TCCTATGTGAGCCCCGTGGCCCATGGAGCCGGTCTGTGGAACGGAGCCTG
GAATGGTGCCTGGAACGGTGCCTGGAACGGCGCCTGGAACGGTGCTCCCT
GGGGTGCCCCTGCCGCCGTTGCCGTCCATGCCAGCGCTGCTCCCTGGGGT
CTGACCGGTGCCGGATGGCACGGCGCTGCTGTTCCCGGAATCAACCTGGC
CCAGGGACCCGGTCTCGCCGCCGGCCATGGCCATGAGGGCGTCTATGTGG
CCAAGACCCGTGGTGCCATCCACACCGCTCCCCTCGCCGGACACATCAAC
TCTGCCACCTCCGTGAACGTGGCCCCTGCCCCCGGAACTCTGGCAAGCTT
TCTAGACC
BO04328.5prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 12:02:56
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG7214-PA | 429 | CG7214-RA | 1..426 | 17..442 | 2130 | 100 | Plus |
CG7216-PA | 408 | Acp1-RA | 317..360 | 354..397 | 145 | 93.1 | Plus |
CG31904-PD | 1212 | CG31904-RD | 980..1023 | 354..397 | 145 | 93.1 | Plus |
CG31904-PB | 1212 | CG31904-RB | 980..1023 | 354..397 | 145 | 93.1 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-11 04:44:01
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG7214-RA | 1041 | CG7214-RA | 85..512 | 15..442 | 2140 | 100 | Plus |
Acp1-RA | 858 | CG7216-RA | 369..416 | 350..397 | 180 | 91.7 | Plus |
CG31904-RB | 3572 | CG31904-RB | 3087..3134 | 350..397 | 180 | 91.7 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2015-02-11 04:43:57
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
2L | 23513712 | 2L | 7744211..7744632 | 442..21 | 2110 | 100 | Minus |
2L | 23513712 | 2L | 7734853..7734900 | 397..350 | 180 | 91.7 | Minus |
2L | 23513712 | 2L | 7741004..7741051 | 397..350 | 180 | 91.7 | Minus |
Blast to na_te.dros performed on 2015-02-11 04:43:59 has no hits.
BO04328.5prime Sim4 Records
Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 02:00:06 Download gff for
BO04328.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG7214-PA | 1..429 | 17..446 | 99 | | Plus |
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 00:11:50 Download gff for
BO04328.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG7214-PA | 1..429 | 17..446 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-23 06:12:33 Download gff for
BO04328.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG7214-RA | 79..516 | 9..447 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-11 09:21:07 Download gff for
BO04328.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG7214-RA | 79..516 | 9..447 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-11 09:21:07 Download gff for
BO04328.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
2L | 7744207..7744632 | 21..447 | 99 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-23 06:12:33 Download gff for
BO04328.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_2L | 7744207..7744632 | 21..447 | 99 | | Minus |
BO04328.complete Sequence
460 bp (460 high quality bases) assembled on 2005-09-08
GenBank Submission: FJ629727
> BO04328.complete
GAAGTTATCAGTCGACATGAAGTTCGCCGTTGCCGTAGTCATGTTCGTGT
GCGCCCTGGCTGGAGCTCATGCCTCGTGGGCCCAGATCGCTCCCGGTGTG
TCCTATGTGAGCCCCGTGGCCCATGGAGCCGGTCTGTGGAACGGAGCCTG
GAATGGTGCCTGGAACGGTGCCTGGAACGGCGCCTGGAACGGTGCTCCCT
GGGGTGCCCCTGCCGCCGTTGCCGTCCATGCCAGCGCTGCTCCCTGGGGT
CTGACCGGTGCCGGATGGCACGGCGCTGCTGTTCCCGGAATCAACCTGGC
CCAGGGACCCGGTCTCGCCGCCGGCCATGGCCATGAGGGCGTCTATGTGG
CCAAGACCCGTGGTGCCATCCACACCGCTCCCCTCGCCGGACACATCAAC
TCTGCCACCTCCGTGAACGTGGCCCCTGCCCCCGGAACTCTGGCAAGCTT
TCTAGACCAT
BO04328.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-27 15:42:49
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG7214-RA | 429 | CG7214-PA | 1..426 | 17..442 | 2130 | 100 | Plus |
Acp1-RA | 408 | CG7216-PA | 313..360 | 350..397 | 180 | 91.7 | Plus |
CG31904-RB | 1212 | CG31904-PB | 976..1023 | 350..397 | 180 | 91.7 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 15:42:50
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG7214-RA | 1041 | CG7214-RA | 85..512 | 15..442 | 2140 | 100 | Plus |
Acp1-RA | 858 | CG7216-RA | 369..416 | 350..397 | 180 | 91.7 | Plus |
CG31904-RB | 3572 | CG31904-RB | 3087..3134 | 350..397 | 180 | 91.7 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 15:42:47
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
2L | 23513712 | 2L | 7744211..7744632 | 442..21 | 2110 | 100 | Minus |
2L | 23513712 | 2L | 7734853..7734900 | 397..350 | 180 | 91.7 | Minus |
2L | 23513712 | 2L | 7741004..7741051 | 397..350 | 180 | 91.7 | Minus |
Blast to na_te.dros performed on 2014-11-27 15:42:49 has no hits.
BO04328.complete Sim4 Records
Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-21 14:07:33 Download gff for
BO04328.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG7214-RA | 1..429 | 17..446 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-11 05:23:44 Download gff for
BO04328.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG7214-RA | 81..518 | 9..447 | 98 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 18:45:05 Download gff for
BO04328.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG7214-RA | 87..512 | 17..444 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 14:07:33 Download gff for
BO04328.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG7214-RA | 81..518 | 9..447 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 16:14:38 Download gff for
BO04328.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG7214-RA | 87..512 | 17..444 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 16:14:38 Download gff for
BO04328.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
2L | 7744209..7744635 | 17..444 | 98 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 18:45:05 Download gff for
BO04328.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_2L | 7744209..7744635 | 17..444 | 98 | | Minus |
BO04328.pep Sequence
Translation from 16 to 460
> BO04328.pep
MKFAVAVVMFVCALAGAHASWAQIAPGVSYVSPVAHGAGLWNGAWNGAWN
GAWNGAWNGAPWGAPAAVAVHASAAPWGLTGAGWHGAAVPGINLAQGPGL
AAGHGHEGVYVAKTRGAIHTAPLAGHINSATSVNVAPAPGTLASFLDH
BO04328.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 00:01:53
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG7214-PA | 142 | CG7214-PA | 1..142 | 1..142 | 783 | 100 | Plus |
Acp1-PA | 135 | CG7216-PA | 1..135 | 1..142 | 211 | 41.3 | Plus |
CG7203-PC | 129 | CG7203-PC | 1..128 | 1..141 | 164 | 36.7 | Plus |
CG7203-PB | 129 | CG7203-PB | 1..128 | 1..141 | 164 | 36.7 | Plus |
CG31904-PB | 403 | CG31904-PB | 224..341 | 3..127 | 147 | 37.7 | Plus |