Clone BO04332 Report

Search the DGRC for BO04332

Clone and Library Details

Library:BO
Tissue Source:D. melanogaster
Created by:Joe Carlson
Date Registered:2004-06-03
Comments:Infusion clones with open reading frames
Original Plate Number:43
Well:32
Vector:pDNR-Dual
Associated Gene/TranscriptCG4045-RA
Protein status:BO04332.pep: validated full length
Sequenced Size:802

Clone Sequence Records

BO04332.3prime Sequence

800 bp (799 high quality bases) assembled on 2005-12-01

> BO04332.3prime
ATGGTCTAGAAAGCTTGCAAGGCGCCGGAAAATGGCCAGAAAATGATCGC
CCTTGTTTCGAACCACCTTAGCGCCCTCCTCGCTGCTTTGGTACAGCTTC
GGGGTGATGGGATCAGCATTGGCCTCCTCTTCGGTAAGACGCTCGTACAG
CGGATGCTCCTCCATATGTGTCACTATCCACTTGTGCAAGTCCTCAACGT
CCGTCATGGTGTACAACAGACCCCCCTTCCTGAGGATATAGGCATATTCG
GAGAGTAGAGCCTGGTTGATAATACGCCACTTGTGCTTGGCGCGCTTGAA
ATGTGGGTCCGGGTAGAGGAAGAACATCTTCTCCAGCTGGCCCTTTACGA
AGTAGTTGGGCAGATACTTCATGGCGTTGGTGCGTAAGCAGGCAATGTTC
TGGTATGCACCCGTATCCGCGCATCGTCGACGCAGTGCCGCAATCCGGTC
CACCACGTAGTCCGACACCTTGACGCGGATTTCCATGCCGATGGACAGCT
TCTCGGGGAACATCTCCCCCAGGGTGACGAGAAAGCCGCCATAGCCGCAG
CCTATGTCCGCAAAACTTACCTGCTGGCCCTGCTGAATGCCTGGGTACAT
GGAGCGCCAGTCCACATCTTCCGGGCGAGCAGGATAGTCGAAGCTGTGGT
CCGCAATGGGATTCGAGTGCGCACGCTGGCGGTAGTAGCGCTTTTGTGGC
AACCCCGTCACCGCCGACGTGGGGTTTAGCACATCCGGCTCCTGGTTCTG
GCCCTGATCCTGAGCCTGTCCACCGGTGGCCACCATGTCGACTGATAACT

BO04332.3prime Blast Records

Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 12:03:00
Subject Length Description Subject Range Query Range Score Percent Strand
CG4045-PA 771 CG4045-RA 1..768 786..19 3840 100 Minus
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-13 02:00:44
Subject Length Description Subject Range Query Range Score Percent Strand
CG4045-RA 923 CG4045-RA 81..848 786..19 3840 100 Minus
Blast to na_all.dmel.RELEASE6 performed 2015-02-13 02:00:36
Subject Length Description Subject Range Query Range Score Percent Strand
X 23542271 X 2075206..2075618 222..634 2065 100 Plus
X 23542271 X 2075669..2075820 635..786 760 100 Plus
X 23542271 X 2075038..2075140 121..223 515 100 Plus
X 23542271 X 2074870..2074971 19..120 510 100 Plus
Blast to na_te.dros performed on 2015-02-13 02:00:41 has no hits.

BO04332.3prime Sim4 Records

Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 02:00:10 Download gff for BO04332.3prime
Subject Subject Range Query Range Percent Splice Strand
CG4045-PA 1..771 18..786 99   Minus
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 00:11:57 Download gff for BO04332.3prime
Subject Subject Range Query Range Percent Splice Strand
CG4045-PA 1..771 18..786 99   Minus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-09-01 06:33:57 Download gff for BO04332.3prime
Subject Subject Range Query Range Percent Splice Strand
CG4045-RA 72..848 19..798 99   Minus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-13 03:26:12 Download gff for BO04332.3prime
Subject Subject Range Query Range Percent Splice Strand
CG4045-RA 72..848 19..798 99   Minus
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-13 03:26:12 Download gff for BO04332.3prime
Subject Subject Range Query Range Percent Splice Strand
X 2074870..2074971 19..120 100 <- Plus
X 2075038..2075139 121..222 100 <- Plus
X 2075207..2075618 223..634 100 <- Plus
X 2075669..2075828 635..798 96   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-09-01 06:33:57 Download gff for BO04332.3prime
Subject Subject Range Query Range Percent Splice Strand
arm_X 1968903..1969004 19..120 100 <- Plus
arm_X 1969071..1969172 121..222 100 <- Plus
arm_X 1969240..1969651 223..634 100 <- Plus
arm_X 1969702..1969861 635..798 96   Plus

BO04332.5prime Sequence

800 bp (799 high quality bases) assembled on 2005-11-29

> BO04332.5prime
GAAGTTATCAGTCGACATGGTGGCCACCGGTGGACAGGCTCAGGATCAGG
GCCAGAACCAGGAGCCGGATGTGCTAAACCCCACGTCGGCGGTGACGGGG
TTGCCACAAAAGCGCTACTACCGCCAGCGTGCGCACTCGAATCCCATTGC
GGACCACAGCTTCGACTATCCTGCTCGCCCGGAAGATGTGGACTGGCGCT
CCATGTACCCAGGCATTCAGCAGGGCCAGCAGGTAAGTTTTGCGGACATA
GGCTGCGGCTATGGCGGCTTTCTCGTCACCCTGGGGGAGATGTTCCCCGA
GAAGCTGTCCATCGGCATGGAAATCCGCGTCAAGGTGTCGGACTACGTGG
TGGACCGGATTGCGGCACTGCGTCGACGATGCGCGGATACGGGTGCATAC
CAGAACATTGCCTGCTTACGCACCAACGCCATGAAGTATCTGCCCAACTA
CTTCGTAAAGGGCCAGCTGGAGAAGATGTTCTTCCTCTACCCGGACCCAC
ATTTCAAGCGCGCCAAGCACAAGTGGCGTATTATCAACCAGGCTCTACTC
TCCGAATATGCCTATATCCTCAGGAAGGGGGGTCTGTTGTACACCATGAC
GGACGTTGAGGACTTGCACAAGTGGATAGTGACACATATGGAGGAGCATC
CGCTGTACGAGCGTCTTACCGAAGAGGAGGCCAATGCTGATCCCATCACC
CCGAAGCTGTACCAAAGCAGCGAGGAGGGCGCTAAGGTGGTTCGAAACAA
GGGCGATCATTTTCTGGCCATTTTCCGGCGCCTTGCAAGCTTTCTAGACC

BO04332.5prime Blast Records

Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 12:03:01
Subject Length Description Subject Range Query Range Score Percent Strand
CG4045-PA 771 CG4045-RA 1..768 17..784 3840 100 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-13 15:13:53
Subject Length Description Subject Range Query Range Score Percent Strand
CG4045-RA 923 CG4045-RA 81..848 17..784 3840 100 Plus
Blast to na_all.dmel.RELEASE6 performed 2015-02-13 15:13:47
Subject Length Description Subject Range Query Range Score Percent Strand
X 23542271 X 2075206..2075618 581..169 2065 100 Minus
X 23542271 X 2075669..2075820 168..17 760 100 Minus
X 23542271 X 2075038..2075140 682..580 515 100 Minus
X 23542271 X 2074870..2074971 784..683 510 100 Minus
Blast to na_te.dros performed on 2015-02-13 15:13:52 has no hits.

BO04332.5prime Sim4 Records

Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 02:00:11 Download gff for BO04332.5prime
Subject Subject Range Query Range Percent Splice Strand
CG4045-PA 1..771 17..785 99   Plus
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 00:11:59 Download gff for BO04332.5prime
Subject Subject Range Query Range Percent Splice Strand
CG4045-PA 1..771 17..785 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-09-03 11:01:25 Download gff for BO04332.5prime
Subject Subject Range Query Range Percent Splice Strand
CG4045-RA 72..848 5..784 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-13 16:47:07 Download gff for BO04332.5prime
Subject Subject Range Query Range Percent Splice Strand
CG4045-RA 72..848 5..784 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-13 16:47:07 Download gff for BO04332.5prime
Subject Subject Range Query Range Percent Splice Strand
X 2074870..2074971 683..784 100 <- Minus
X 2075038..2075139 581..682 100 <- Minus
X 2075207..2075618 169..580 100 <- Minus
X 2075669..2075828 5..168 96   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-09-03 11:01:25 Download gff for BO04332.5prime
Subject Subject Range Query Range Percent Splice Strand
arm_X 1968903..1969004 683..784 100 <- Minus
arm_X 1969071..1969172 581..682 100 <- Minus
arm_X 1969240..1969651 169..580 100 <- Minus
arm_X 1969702..1969861 5..168 96   Minus

BO04332.complete Sequence

802 bp (802 high quality bases) assembled on 2005-09-08

GenBank Submission: FJ629729

> BO04332.complete
GAAGTTATCAGTCGACATGGTGGCCACCGGTGGACAGGCTCAGGATCAGG
GCCAGAACCAGGAGCCGGATGTGCTAAACCCCACGTCGGCGGTGACGGGG
TTGCCACAAAAGCGCTACTACCGCCAGCGTGCGCACTCGAATCCCATTGC
GGACCACAGCTTCGACTATCCTGCTCGCCCGGAAGATGTGGACTGGCGCT
CCATGTACCCAGGCATTCAGCAGGGCCAGCAGGTAAGTTTTGCGGACATA
GGCTGCGGCTATGGCGGCTTTCTCGTCACCCTGGGGGAGATGTTCCCCGA
GAAGCTGTCCATCGGCATGGAAATCCGCGTCAAGGTGTCGGACTACGTGG
TGGACCGGATTGCGGCACTGCGTCGACGATGCGCGGATACGGGTGCATAC
CAGAACATTGCCTGCTTACGCACCAACGCCATGAAGTATCTGCCCAACTA
CTTCGTAAAGGGCCAGCTGGAGAAGATGTTCTTCCTCTACCCGGACCCAC
ATTTCAAGCGCGCCAAGCACAAGTGGCGTATTATCAACCAGGCTCTACTC
TCCGAATATGCCTATATCCTCAGGAAGGGGGGTCTGTTGTACACCATGAC
GGACGTTGAGGACTTGCACAAGTGGATAGTGACACATATGGAGGAGCATC
CGCTGTACGAGCGTCTTACCGAAGAGGAGGCCAATGCTGATCCCATCACC
CCGAAGCTGTACCAAAGCAGCGAGGAGGGCGCTAAGGTGGTTCGAAACAA
GGGCGATCATTTTCTGGCCATTTTCCGGCGCCTTGCAAGCTTTCTAGACC
AT

BO04332.complete Blast Records

Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-26 22:00:23
Subject Length Description Subject Range Query Range Score Percent Strand
CG4045-RA 771 CG4045-PA 1..768 17..784 3840 100 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-26 22:00:23
Subject Length Description Subject Range Query Range Score Percent Strand
CG4045-RA 923 CG4045-RA 81..848 17..784 3840 100 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-26 22:00:22
Subject Length Description Subject Range Query Range Score Percent Strand
X 23542271 X 2075206..2075618 581..169 2065 100 Minus
X 23542271 X 2075669..2075820 168..17 760 100 Minus
X 23542271 X 2075038..2075140 682..580 515 100 Minus
X 23542271 X 2074870..2074971 784..683 510 100 Minus
Blast to na_te.dros performed on 2014-11-26 22:00:22 has no hits.

BO04332.complete Sim4 Records

Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-21 22:35:06 Download gff for BO04332.complete
Subject Subject Range Query Range Percent Splice Strand
CG4045-RA 1..771 17..785 99   Plus
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-11 07:02:47 Download gff for BO04332.complete
Subject Subject Range Query Range Percent Splice Strand
CG4045-RA 72..848 5..784 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 03:43:30 Download gff for BO04332.complete
Subject Subject Range Query Range Percent Splice Strand
CG4045-RA 81..848 17..786 99   Plus
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 22:35:07 Download gff for BO04332.complete
Subject Subject Range Query Range Percent Splice Strand
CG4045-RA 36..812 5..784 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 22:48:17 Download gff for BO04332.complete
Subject Subject Range Query Range Percent Splice Strand
CG4045-RA 81..848 17..786 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-26 22:48:17 Download gff for BO04332.complete
Subject Subject Range Query Range Percent Splice Strand
X 2074868..2074971 683..786 98 <- Minus
X 2075038..2075139 581..682 100 <- Minus
X 2075207..2075618 169..580 100 <- Minus
X 2075669..2075820 17..168 100   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 03:43:30 Download gff for BO04332.complete
Subject Subject Range Query Range Percent Splice Strand
arm_X 1969240..1969651 169..580 100 <- Minus
arm_X 1968901..1969004 683..786 98 <- Minus
arm_X 1969071..1969172 581..682 100 <- Minus
arm_X 1969702..1969853 17..168 100   Minus

BO04332.pep Sequence

Translation from 16 to 802

> BO04332.pep
MVATGGQAQDQGQNQEPDVLNPTSAVTGLPQKRYYRQRAHSNPIADHSFD
YPARPEDVDWRSMYPGIQQGQQVSFADIGCGYGGFLVTLGEMFPEKLSIG
MEIRVKVSDYVVDRIAALRRRCADTGAYQNIACLRTNAMKYLPNYFVKGQ
LEKMFFLYPDPHFKRAKHKWRIINQALLSEYAYILRKGGLLYTMTDVEDL
HKWIVTHMEEHPLYERLTEEEANADPITPKLYQSSEEGAKVVRNKGDHFL
AIFRRLASFLDH

BO04332.pep Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 19:35:25
Subject Length Description Subject Range Query Range Score Percent Strand
CG4045-PA 256 CG4045-PA 1..256 1..256 1365 100 Plus