Clone Sequence Records
BO04430.3prime Sequence
889 bp (833 high quality bases) assembled on 2005-12-01
> BO04430.3prime
ATGGTCTAGAAAGCTTGCCGTCAAGTCTTCATCCTCCTTGGTTGTGAACT
GGAACACTTCGTAGTGATGGTTGAGTTCCCGCACCGAATGCAGTTGGAAT
CTCGTGGCTAGAGCTCCGTTTTCAGAGTTCTTAACGAAAAATACTCTTTT
CGCCCTGCTATGTACCAGGGCCATGGAGCACATAAGGCAGGGTTCCTGCA
GCAGATAGATATCGTAGCCGGTGCACAGATAGGGTCCGAATTTGGCCAGG
TTATCTGCTCCTTGAACTGCGTCCACTTCTTTGCATTCTCTCGACTTTTC
CGCTCCGAATGTCAGGTCTTTGTAGTCTTCATTGTTCATCAGGTAATCGT
AGTAGGCTTTAGGAATACCCCGCAGAGTGGTATCCTTCTTGAAATCTTCG
GTGAATGTAACCTCCGTTTTTGTGGCGCCTCCTTCTTGACTGCGAGCCAC
AAAATCGACGAGCATCATGCAGCAGTGCTCGTGCGGCCTACAAACTTCAC
CAGTTCCAGCAATGGACACAATGCTGGGTTGTCGCGGATCCACGCAGATG
CCCACCGGACGATTGGCATTGACATCCCGCGAGAGCCTCACAAGCAATTG
CCCGATCCTTTTGTGAAATGTGCGTTGTGCGGAGCTAAAGTTGCTGCCAT
TCCTCAGTGACTCCGAGTAGTGATTAGGGTGAAACTTGCAGGGCCAGTGC
TTAAGGGTCTTCTCGTACTGCACCCGCAGTCGGGGCATCCGTTCCGGCAC
CTCCACCACCCGGACTCCCTGGCACAAAGCACGGAGCACGTGCTCCGAAA
AGGCAAACTGTTCAAGGTGTTGTTCCAGGCTTTGAGACACTCCGATCTCT
GAGCTGGGACATATGAGCACGCTGCGATCCTGGACGCGC
BO04430.3prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 12:05:04
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG10927-PA | 1083 | CG10927-RA | 210..1080 | 889..19 | 4355 | 100 | Minus |
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-12 10:06:52
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG10927-RA | 1166 | CG10927-RA | 247..1117 | 889..19 | 4355 | 100 | Minus |
Blast to na_all.dmel.RELEASE6 performed 2015-02-12 10:06:47
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2R | 25286936 | 2R | 18613336..18614206 | 889..19 | 4355 | 100 | Minus |
Blast to na_te.dros performed on 2015-02-12 10:06:50 has no hits.
BO04430.3prime Sim4 Records
Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 02:02:44 Download gff for
BO04430.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG10927-PA | 210..1083 | 15..889 | 99 | | Minus |
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 00:15:45 Download gff for
BO04430.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG10927-PA | 210..1083 | 15..889 | 99 | | Minus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-29 20:52:53 Download gff for
BO04430.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG10927-RA | 247..1124 | 10..889 | 99 | | Minus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-12 13:04:55 Download gff for
BO04430.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG10927-RA | 247..1124 | 10..889 | 99 | | Minus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-12 13:04:55 Download gff for
BO04430.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2R | 18613336..18614213 | 10..889 | 99 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-29 20:52:53 Download gff for
BO04430.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2R | 14500841..14501718 | 10..889 | 99 | | Minus |
BO04430.5prime Sequence
839 bp (792 high quality bases) assembled on 2005-11-29
> BO04430.5prime
GAAGTTATCAGTCGACATGGATATATCCGCGCCACCAAACAAACGTGCTC
GAAAATCACCCAATCTGGATGAAGACATAACTGGGATCCGGGCCATCCTC
TCCGATGAGTTCGACGAGGATATTGCGCTCATCAAGGCGCACAGTTGCGA
GTTGGAGACGAAACAGCAGCTCCAGGCGGTCATCCAGGAGCTCTCACAGA
AATTGCCCCACTTTCAACACCTAAAGCGCGTCCAGGATCGCAGCGTGCTC
ATATGTCCCAGCTCAGAGATCGGAGTGTCTCAAAGCCTGGAACAACACCT
TGAACAGTTTGCCTTTTCGGAGCACGTGCTCCGTGCTTTGTGCCAGGGAG
TCCGGGTGGTGGAGGTGCCGGAACGGATGCCCCGACTGCGGGTGCAGTAC
GAGAAGACCCTTAAGCACTGGCCCTGCAAGTTTCACCCTAATCACTACTC
GGAGTCACTGAGGAATGGCAGCAACTTTAGCTCCGCACAACGCACATTTC
ACAAAAGGATCGGGCAATTGCTTGTGAGGCTCTCGCGGGATGTCAATGCC
AATCGTCCGGTGGGCATCTGCGTGGATCCGCGACAACCCAGCATTGTGTC
CATTGCTGGAACTGGTGAAGTTTGTAGGCCGCACGAGCACTGCTGCATGA
TGCTCGTCGATTTTGTGGCTCGCAGTCAAGAAGGAGGCGCCACAAAAACG
GAGGTTACATTCACCGAAGATTTCAAGAAGGATACCACTCTGCGGGGTAT
TCCTAAAGCCTACTACGATTACCTGATGAACAATGAAGACTACAAAGACC
TGACATTCGGAGCGGAAAAGTCGAGAGAATGCAAAGAAG
BO04430.5prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 12:05:04
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG10927-PA | 1083 | CG10927-RA | 1..823 | 17..839 | 4115 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-12 01:06:49
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG10927-RA | 1166 | CG10927-RA | 38..860 | 17..839 | 4115 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2015-02-12 01:06:42
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2R | 25286936 | 2R | 18613127..18613949 | 17..839 | 4115 | 100 | Plus |
Blast to na_te.dros performed on 2015-02-12 01:06:45 has no hits.
BO04430.5prime Sim4 Records
Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 02:02:45 Download gff for
BO04430.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG10927-PA | 1..823 | 17..839 | 100 | | Plus |
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 00:15:46 Download gff for
BO04430.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG10927-PA | 1..823 | 17..839 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-28 11:38:10 Download gff for
BO04430.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG10927-RA | 38..860 | 17..839 | 100 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-12 05:00:19 Download gff for
BO04430.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG10927-RA | 38..860 | 17..839 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-12 05:00:19 Download gff for
BO04430.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2R | 18613127..18613949 | 17..839 | 100 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-28 11:38:10 Download gff for
BO04430.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2R | 14500632..14501454 | 17..839 | 100 | | Plus |
BO04430.complete Sequence
1114 bp (1114 high quality bases) assembled on 2005-09-08
GenBank Submission: FJ629757
> BO04430.complete
GAAGTTATCAGTCGACATGGATATATCCGCGCCACCAAACAAACGTGCTC
GAAAATCACCCAATCTGGATGAAGACATAACTGGGATCCGGGCCATCCTC
TCCGATGAGTTCGACGAGGATATTGCGCTCATCAAGGCGCACAGTTGCGA
GTTGGAGACGAAACAGCAGCTCCAGGCGGTCATCCAGGAGCTCTCACAGA
AATTGCCCCACTTTCAACACCTAAAGCGCGTCCAGGATCGCAGCGTGCTC
ATATGTCCCAGCTCAGAGATCGGAGTGTCTCAAAGCCTGGAACAACACCT
TGAACAGTTTGCCTTTTCGGAGCACGTGCTCCGTGCTTTGTGCCAGGGAG
TCCGGGTGGTGGAGGTGCCGGAACGGATGCCCCGACTGCGGGTGCAGTAC
GAGAAGACCCTTAAGCACTGGCCCTGCAAGTTTCACCCTAATCACTACTC
GGAGTCACTGAGGAATGGCAGCAACTTTAGCTCCGCACAACGCACATTTC
ACAAAAGGATCGGGCAATTGCTTGTGAGGCTCTCGCGGGATGTCAATGCC
AATCGTCCGGTGGGCATCTGCGTGGATCCGCGACAACCCAGCATTGTGTC
CATTGCTGGAACTGGTGAAGTTTGTAGGCCGCACGAGCACTGCTGCATGA
TGCTCGTCGATTTTGTGGCTCGCAGTCAAGAAGGAGGCGCCACAAAAACG
GAGGTTACATTCACCGAAGATTTCAAGAAGGATACCACTCTGCGGGGTAT
TCCTAAAGCCTACTACGATTACCTGATGAACAATGAAGACTACAAAGACC
TGACATTCGGAGCGGAAAAGTCGAGAGAATGCAAAGAAGTGGACGCAGTT
CAAGGAGCAGATAACCTGGCCAAATTCGGACCCTATCTGTGCACCGGCTA
CGATATCTATCTGCTGCAGGAACCCTGCCTTATGTGCTCCATGGCCCTGG
TACATAGCAGGGCGAAAAGAGTATTTTTCGTTAAGAACTCTGAAAACGGA
GCTCTAGCCACGAGATTCCAACTGCATTCGGTGCGGGAACTCAACCATCA
CTACGAAGTGTTCCAGTTCACAACCAAGGAGGATGAAGACTTGACGGCAA
GCTTTCTAGACCAT
BO04430.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-26 21:58:06
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG10927-RA | 1083 | CG10927-PA | 1..1080 | 17..1096 | 5400 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-26 21:58:07
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG10927-RA | 1166 | CG10927-RA | 38..1117 | 17..1096 | 5400 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-26 21:58:04
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2R | 25286936 | 2R | 18613127..18614206 | 17..1096 | 5400 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-26 21:58:05 has no hits.
BO04430.complete Sim4 Records
Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-21 22:41:05 Download gff for
BO04430.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG10927-RA | 1..1083 | 17..1100 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-11 07:10:39 Download gff for
BO04430.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG10927-RA | 46..1132 | 17..1105 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 03:42:20 Download gff for
BO04430.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG10927-RA | 38..1117 | 17..1098 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 22:41:05 Download gff for
BO04430.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG10927-RA | 46..1132 | 17..1105 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 22:47:15 Download gff for
BO04430.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG10927-RA | 38..1117 | 17..1098 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-26 22:47:15 Download gff for
BO04430.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2R | 18613127..18614206 | 17..1098 | 99 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 03:42:20 Download gff for
BO04430.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2R | 14500632..14501711 | 17..1098 | 99 | | Plus |
BO04430.pep Sequence
Translation from 16 to 1114
> BO04430.pep
MDISAPPNKRARKSPNLDEDITGIRAILSDEFDEDIALIKAHSCELETKQ
QLQAVIQELSQKLPHFQHLKRVQDRSVLICPSSEIGVSQSLEQHLEQFAF
SEHVLRALCQGVRVVEVPERMPRLRVQYEKTLKHWPCKFHPNHYSESLRN
GSNFSSAQRTFHKRIGQLLVRLSRDVNANRPVGICVDPRQPSIVSIAGTG
EVCRPHEHCCMMLVDFVARSQEGGATKTEVTFTEDFKKDTTLRGIPKAYY
DYLMNNEDYKDLTFGAEKSRECKEVDAVQGADNLAKFGPYLCTGYDIYLL
QEPCLMCSMALVHSRAKRVFFVKNSENGALATRFQLHSVRELNHHYEVFQ
FTTKEDEDLTASFLDH
BO04430.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 19:31:13
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG10927-PA | 360 | CG10927-PA | 1..360 | 1..360 | 1896 | 100 | Plus |
