Clone BO04571 Report

Search the DGRC for BO04571

Clone and Library Details

Library:BO
Tissue Source:D. melanogaster
Created by:Joe Carlson
Date Registered:2004-06-03
Comments:Infusion clones with open reading frames
Original Plate Number:45
Well:71
Vector:pDNR-Dual
Associated Gene/Transcriptbys-RA
Protein status:BO04571.pep: validated full length
Sequenced Size:1342

Clone Sequence Records

BO04571.3prime Sequence

913 bp (756 high quality bases) assembled on 2005-12-01

> BO04571.3prime
ATGGTCTAGAAAGCTTGCGCCCTCGTACTCCACATCGGCATCTGTGTACA
TCTTGGCTGGCTGCCCAGCCAGGCCATTATCCGTCTCCATCATTTCCACA
TCGCGACAACTGGCCGCCTGGAGCTCCCTTCTCACATCGGGTGTAATCTT
GAAATGGCTCTTCTTTTTGAGCAGCTGCAGCAGTGCATCCCGCTGTTCGG
AGGATATATCGTTCTTGTATCGCTGGGCAAAGGTGAGCAGGCTCTGGTGC
CATAGCACTGGTAACTCACGCTTGTCGTTCTCGAATCTTAGAAAATGAAA
GACTGCGGCATCCACGACGCGATAAGGCAGAGCATACCGCTTGTCCAGAA
AGTAACGGATGAATATGGAGTTAGCTCCCGAATAGGCCATCTCACAGATC
TTCAGCAGGCAGGCGGAGGAGTGCAGGACGGGAATAGAGCTGCGGGCCAC
CACACTGCCGAAAATGATGGCCTCGCGCAATGTGCAATCGCCGCCCTCGA
GCAGCGGCAGAATGATTCCCTTCATGAAGGCAGCCGGCTTGAAGAGAGCC
CTCTTCAGTGCATTGTACAGATGCATATTGAGCTTCTTATATTCGCAGAG
ATCATCACGAACTCGTGGCAGGAGCACCAGGTTATAGAACCTCTGGGCCA
TTGCCTGCGACAGCACCGAGCAGAAGATGCGGGTGCCTTGGAACATGGCG
GCAGCGCTCCAATTATGGGGCTCAGTGATGAACAAGATCTGCTCCCAATT
GCGCAGCTTGGGTATGATCTTGAAGGCCTTAGGGATCTTGCCACTGCGAT
AGCGTTTCAACACATCGCGCACGCCCTCGTACATCTCCTTCACTTTCGGG
TCGATTTCCTCGATCTTTAGTGAGCCCTCGTCAGAGATCTTAGTGTGTAT
GTCGGGCTCCTTC

BO04571.3prime Blast Records

Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 12:07:58
Subject Length Description Subject Range Query Range Score Percent Strand
CG1430-PA 1311 bys-RA 414..1308 913..19 4450 99.8 Minus
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-04 19:26:45
Subject Length Description Subject Range Query Range Score Percent Strand
bys-RA 1518 CG1430-RA 526..1420 913..19 4460 99.9 Minus
Blast to na_all.dmel.RELEASE6 performed 2015-02-04 19:26:40
Subject Length Description Subject Range Query Range Score Percent Strand
X 23542271 X 7902533..7903159 913..287 3120 99.8 Minus
X 23542271 X 7903398..7903545 166..19 740 100 Minus
X 23542271 X 7903214..7903335 288..167 610 100 Minus
Blast to na_te.dros performed on 2015-02-04 19:26:42 has no hits.

BO04571.3prime Sim4 Records

Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 02:06:14 Download gff for BO04571.3prime
Subject Subject Range Query Range Percent Splice Strand
bys-PA 414..1311 16..913 99   Minus
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 00:20:44 Download gff for BO04571.3prime
Subject Subject Range Query Range Percent Splice Strand
CG1430-PA 414..1311 16..913 99   Minus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-10 21:17:14 Download gff for BO04571.3prime
Subject Subject Range Query Range Percent Splice Strand
bys-RA 526..1426 13..913 99   Minus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-04 21:33:09 Download gff for BO04571.3prime
Subject Subject Range Query Range Percent Splice Strand
bys-RA 526..1426 13..913 99   Minus
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-04 21:33:09 Download gff for BO04571.3prime
Subject Subject Range Query Range Percent Splice Strand
X 7902533..7903159 287..913 99 -> Minus
X 7903216..7903335 167..286 100 -> Minus
X 7903398..7903551 13..166 98   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-10 21:17:14 Download gff for BO04571.3prime
Subject Subject Range Query Range Percent Splice Strand
arm_X 7796566..7797192 287..913 99 -> Minus
arm_X 7797249..7797368 167..286 100 -> Minus
arm_X 7797431..7797584 13..166 98   Minus

BO04571.5prime Sequence

947 bp (803 high quality bases) assembled on 2005-11-29

> BO04571.5prime
GAAGTTATCAGTCGACATGGGTAAGCCGAAGAAGGCCAACGTGGCAACGA
TTAAAAATGTGAATCTGGAGAAGCAGATCACCGAGGGCAGGGTGGCGAAA
AACAAGAACAAGGATAAAGTCAAACTGCGGGCCGAGGAATCGGCGAACAT
CGATGCCAGAAGTAGTCAAAAGATCCTGGCCGCGGCCAAGCTGCAGCAGT
TGGAGCTGGACGAAGAGAACTTTCCCAGTCTGGTGACCGTCAAGAAAGTC
AACTTCAGTTTGAATGATGGCCATGTCAAGGAGGATGAAGAGGTCAACGA
GACTGACCTCATGGCCGACCTGGACATGGACGAAGACGATGTGGCCGCGT
TCGAGCGCTTCCAGCAGCCAGCACAGGAGGGCAAGCGTACGTTGCACCTG
TCCAAGATGATCATGCAGAAGATCCAGGAGAAGGAGGCCGACATACACAC
TAAGATCTCTGACGAGGGCTCACTAAAGATCGAGGAAATCGACCCGAAAG
TGAAGGAGATGTACGAGGGCGTGCGCGATGTGTTGAAACGCTATCGCAGT
GGCAAGATCCCTAAGGCCTTCAAGATCATACCCAAGCTGCGCAATTGGGA
GCAGATCTTGTTCATCACTGAGCCCCATAATTGGAGCGCTGCCGCCATGT
TCCAAGGCACCCGCATCTTCTGCTCGGTGCTGTCGCAGGCAATGGCCCAG
AGGTTCTATAACCTGGTGCTCCTGCCACGAGTTCGTGATGATCTCTGCGA
ATATAAGAAGCTCAATATGCATCTGTACAATGCACTGAAGAGGGCTCTCT
TCAAGCCGGCTGCCTTCATGAAGGGAATCATTCTGCCGCTGCTCGAGGGC
GGCGATTGCACATTGCGCGAGGCCATCATTTTCGGCAGTGTGGTGGCCCG
CAGCTCTATTCCCGTCCTGCACTCCTCCGCCTGCCTGCTGAAAATCT

BO04571.5prime Blast Records

Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 12:07:59
Subject Length Description Subject Range Query Range Score Percent Strand
CG1430-PA 1311 bys-RA 1..926 17..942 4630 100 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-13 13:28:28
Subject Length Description Subject Range Query Range Score Percent Strand
bys-RA 1518 CG1430-RA 113..1043 17..947 4640 99.9 Plus
Blast to na_all.dmel.RELEASE6 performed 2015-02-13 13:28:26
Subject Length Description Subject Range Query Range Score Percent Strand
X 23542271 X 7902367..7903050 264..947 3405 99.9 Plus
X 23542271 X 7901992..7902120 17..145 645 100 Plus
X 23542271 X 7902184..7902302 145..263 595 100 Plus
Blast to na_te.dros performed on 2015-02-13 13:28:27 has no hits.

BO04571.5prime Sim4 Records

Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 02:06:15 Download gff for BO04571.5prime
Subject Subject Range Query Range Percent Splice Strand
bys-PA 1..931 17..947 99   Plus
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 00:20:45 Download gff for BO04571.5prime
Subject Subject Range Query Range Percent Splice Strand
CG1430-PA 1..931 17..947 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-09-02 17:42:21 Download gff for BO04571.5prime
Subject Subject Range Query Range Percent Splice Strand
bys-RA 101..1043 6..947 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-13 16:04:11 Download gff for BO04571.5prime
Subject Subject Range Query Range Percent Splice Strand
bys-RA 101..1043 6..947 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-13 16:04:11 Download gff for BO04571.5prime
Subject Subject Range Query Range Percent Splice Strand
X 7901980..7902120 6..145 96 -> Plus
X 7902185..7902302 146..263 100 -> Plus
X 7902367..7903050 264..947 99   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-09-02 17:42:21 Download gff for BO04571.5prime
Subject Subject Range Query Range Percent Splice Strand
arm_X 7796013..7796153 6..145 96 -> Plus
arm_X 7796218..7796335 146..263 100 -> Plus
arm_X 7796400..7797083 264..947 99   Plus

BO04571.complete Sequence

1342 bp (1342 high quality bases) assembled on 2005-09-08

GenBank Submission: FJ629802

> BO04571.complete
GAAGTTATCAGTCGACATGGGTAAGCCGAAGAAGGCCAACGTGGCAACGA
TTAAAAATGTGAATCTGGAGAAGCAGATCACCGAGGGCAGGGTGGCGAAA
AACAAGAACAAGGATAAAGTCAAACTGCGGGCCGAGGAATCGGCGAACAT
CGATGCCAGAAGTAGTCAAAAGATCCTGGCCGCGGCCAAGCTGCAGCAGT
TGGAGCTGGACGAAGAGAACTTTCCCAGTCTGGTGACCGTCAAGAAAGTC
AACTTCAGTTTGAATGATGGCCATGTCAAGGAGGATGAAGAGGTCAACGA
GACTGACCTCATGGCCGACCTGGACATGGACGAAGACGATGTGGCCGCGT
TCGAGCGCTTCCAGCAGCCAGCACAGGAGGGCAAGCGTACGTTGCACCTG
TCCAAGATGATCATGCAGAAGATCCAGGAGAAGGAGGCCGACATACACAC
TAAGATCTCTGACGAGGGCTCACTAAAGATCGAGGAAATCGACCCGAAAG
TGAAGGAGATGTACGAGGGCGTGCGCGATGTGTTGAAACGCTATCGCAGT
GGCAAGATCCCTAAGGCCTTCAAGATCATACCCAAGCTGCGCAATTGGGA
GCAGATCTTGTTCATCACTGAGCCCCATAATTGGAGCGCTGCCGCCATGT
TCCAAGGCACCCGCATCTTCTGCTCGGTGCTGTCGCAGGCAATGGCCCAG
AGGTTCTATAACCTGGTGCTCCTGCCACGAGTTCGTGATGATCTCTGCGA
ATATAAGAAGCTCAATATGCATCTGTACAATGCACTGAAGAGGGCTCTCT
TCAAGCCGGCTGCCTTCATGAAGGGAATCATTCTGCCGCTGCTCGAGGGC
GGCGATTGCACATTGCGCGAGGCCATCATTTTCGGCAGTGTGGTGGCCCG
CAGCTCTATTCCCGTCCTGCACTCCTCCGCCTGCCTGCTGAAGATCTGTG
AGATGGCCTATTCGGGAGCTAACTCCATATTCATCCGTTACTTTCTGGAC
AAGCGGTATGCTCTGCCTTATCGCGTCGTGGATGCCGCAGTCTTTCATTT
TCTAAGATTCGAGAACGACAAGCGTGAGTTACCAGTGCTATGGCACCAGA
GCCTGCTCACCTTTGCCCAGCGATACAAGAACGATATATCCTCCGAACAG
CGGGATGCACTGCTGCAGCTGCTCAAAAAGAAGAGCCATTTCAAGATTAC
ACCCGATGTGAGAAGGGAGCTCCAGGCGGCCAGTTGTCGCGATGTGGAAA
TGATGGAGACGGATAATGGCCTGGCTGGGCAGCCAGCCAAGATGTACACA
GATGCCGATGTGGAGTACGAGGGCGCAAGCTTTCTAGACCAT

BO04571.complete Blast Records

Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-27 20:09:08
Subject Length Description Subject Range Query Range Score Percent Strand
bys-RA 1311 CG1430-PA 1..1308 17..1324 6540 100 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 20:09:09
Subject Length Description Subject Range Query Range Score Percent Strand
bys-RA 1518 CG1430-RA 113..1420 17..1324 6540 100 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 20:09:06
Subject Length Description Subject Range Query Range Score Percent Strand
X 23542271 X 7902367..7903159 264..1056 3965 100 Plus
X 23542271 X 7903398..7903545 1177..1324 740 100 Plus
X 23542271 X 7901992..7902120 17..145 645 100 Plus
X 23542271 X 7903214..7903335 1055..1176 610 100 Plus
X 23542271 X 7902184..7902302 145..263 595 100 Plus
Blast to na_te.dros performed on 2014-11-27 20:09:07 has no hits.

BO04571.complete Sim4 Records

Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-21 22:40:13 Download gff for BO04571.complete
Subject Subject Range Query Range Percent Splice Strand
bys-RA 1..1311 17..1327 99   Plus
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-11 07:09:17 Download gff for BO04571.complete
Subject Subject Range Query Range Percent Splice Strand
bys-RA 79..1404 6..1330 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 19:03:55 Download gff for BO04571.complete
Subject Subject Range Query Range Percent Splice Strand
bys-RA 113..1420 17..1326 99   Plus
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 22:40:13 Download gff for BO04571.complete
Subject Subject Range Query Range Percent Splice Strand
bys-RA 79..1404 6..1330 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 21:15:56 Download gff for BO04571.complete
Subject Subject Range Query Range Percent Splice Strand
bys-RA 113..1420 17..1326 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 21:15:56 Download gff for BO04571.complete
Subject Subject Range Query Range Percent Splice Strand
X 7901992..7902120 17..145 100 -> Plus
X 7902185..7902302 146..263 100 -> Plus
X 7902367..7903159 264..1056 100 -> Plus
X 7903216..7903335 1057..1176 100 -> Plus
X 7903398..7903545 1177..1326 98   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 19:03:55 Download gff for BO04571.complete
Subject Subject Range Query Range Percent Splice Strand
arm_X 7796025..7796153 17..145 100 -> Plus
arm_X 7796218..7796335 146..263 100 -> Plus
arm_X 7796400..7797192 264..1056 100 -> Plus
arm_X 7797249..7797368 1057..1176 100 -> Plus
arm_X 7797431..7797578 1177..1326 98   Plus

BO04571.pep Sequence

Translation from 16 to 1342

> BO04571.pep
MGKPKKANVATIKNVNLEKQITEGRVAKNKNKDKVKLRAEESANIDARSS
QKILAAAKLQQLELDEENFPSLVTVKKVNFSLNDGHVKEDEEVNETDLMA
DLDMDEDDVAAFERFQQPAQEGKRTLHLSKMIMQKIQEKEADIHTKISDE
GSLKIEEIDPKVKEMYEGVRDVLKRYRSGKIPKAFKIIPKLRNWEQILFI
TEPHNWSAAAMFQGTRIFCSVLSQAMAQRFYNLVLLPRVRDDLCEYKKLN
MHLYNALKRALFKPAAFMKGIILPLLEGGDCTLREAIIFGSVVARSSIPV
LHSSACLLKICEMAYSGANSIFIRYFLDKRYALPYRVVDAAVFHFLRFEN
DKRELPVLWHQSLLTFAQRYKNDISSEQRDALLQLLKKKSHFKITPDVRR
ELQAASCRDVEMMETDNGLAGQPAKMYTDADVEYEGASFLDH

BO04571.pep Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 18:35:00
Subject Length Description Subject Range Query Range Score Percent Strand
bys-PA 436 CG1430-PA 1..436 1..436 2225 100 Plus