Clone BO04595 Report

Search the DGRC for BO04595

Clone and Library Details

Library:BO
Tissue Source:D. melanogaster
Created by:Joe Carlson
Date Registered:2004-06-03
Comments:Infusion clones with open reading frames
Original Plate Number:45
Well:95
Vector:pDNR-Dual
Associated Gene/TranscriptCG17490-RE
Protein status:BO04595.pep: Imported from assembly
Sequenced Size:2155

Clone Sequence Records

BO04595.3prime Sequence

882 bp (786 high quality bases) assembled on 2005-12-01

> BO04595.3prime
ATGGTCTAGAAAGCTTGCATGAATGTCATTTCTAATGATATTATATTTTG
ACTTTAAAACGGAAAAATTTGTTCCAGGGGCCAAGATGTCGTTACATTGT
CGGTACCGAAATCGGTCAACGTCGCTCATTATTGTATGAAAGGTCATGTC
ATAATTTTTGGATGCAGATTCCAGTTGATCCGAGTTTAGAATAATATGTT
GCTTAAAATAGTAAATCGCTGAAGCATCTTTACTTTCCAACATTCCATTT
AAATGGAATTGCAACTTTTCGTTTATAAAATGCAATTTACAATAGTCATT
GTGAATGGAGACGGCATTGCAAAATAGATCCGCTATATTGGGAAAAGTGA
ATTGACTTCCAAGACTGCTGACCTGCCTGATTTTTGGTATACTTGGTTTC
CTTTCCATAAATTGCTTATTGTTCAACCTGTATTTCGCAGGTACTATTCT
TCCACTGAAAATTGCTCGGAATGTATTTCCACAACTTTCTACCGGTACCT
GAAAAAGTACAGCACATGATTGCTCATTAAGTTCCACAAGTTGCAGAAGC
TGGATTTTAAAATGAGGCAGATGCTCGTTTTTCATTTTACTTAACGCTAT
AACCACGCAACATTTTTTATTAACAAGTACTTCTGTGGGCAGTAGGAGGA
CATTGATGCGGTTGTCATAGCATATCAAAAGCTTCCAAAATGTCCCCTGC
AATAGGGGCCGGCTATCGATAAGTCTGACGTTAAGCACAGCGTATATACA
GCTTTTCTGATCAAGATCTAGACTCTGCGCTGCCTGTAGAAGAACATTAT
CCCTGAACATATCAATAGGTACTTGAAGGTGGTATTCCAGTGAGGGTTTA
ATGGCCGCATTTACTCTCCGGATATTTTTACT

BO04595.3prime Blast Records

Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 12:08:26
Subject Length Description Subject Range Query Range Score Percent Strand
CG17490-PB 2145 CG17490-RB 1279..2142 882..19 4245 99.6 Minus
CG17490-PA 393 CG17490-RA 1..390 408..19 1950 100 Minus
CG17490-PC 405 CG17490-RC 3..377 499..125 1875 100 Minus
CG17490-PD 312 CG17490-RD 1..284 408..125 1420 100 Minus
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-12 01:10:12
Subject Length Description Subject Range Query Range Score Percent Strand
CG17490-RF 2953 CG17490-RF 1282..2145 882..19 4275 99.7 Minus
CG17490-RG 2877 CG17490-RG 1902..2765 882..19 4275 99.7 Minus
CG17490-RE 2315 CG17490-RE 1340..2203 882..19 4275 99.7 Minus
Blast to na_all.dmel.RELEASE6 performed 2015-02-12 01:10:06
Subject Length Description Subject Range Query Range Score Percent Strand
2L 23513712 2L 22539569..22540324 882..127 3735 99.6 Minus
2L 23513712 2L 22540377..22540485 127..19 545 100 Minus
Blast to na_te.dros performed on 2015-02-12 01:10:09 has no hits.

BO04595.3prime Sim4 Records

Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-11 12:37:51 Download gff for BO04595.3prime
Subject Subject Range Query Range Percent Splice Strand
CG17490-PB 1279..2145 15..882 99   Minus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-28 11:38:52 Download gff for BO04595.3prime
Subject Subject Range Query Range Percent Splice Strand
CG17490-RE 1340..2211 10..882 99   Minus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-12 05:08:59 Download gff for BO04595.3prime
Subject Subject Range Query Range Percent Splice Strand
CG17490-RE 1340..2211 10..882 99   Minus
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-12 05:08:59 Download gff for BO04595.3prime
Subject Subject Range Query Range Percent Splice Strand
2L 22539569..22540324 127..882 99 -> Minus
2L 22540378..22540493 10..126 96   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-28 11:38:52 Download gff for BO04595.3prime
Subject Subject Range Query Range Percent Splice Strand
arm_2L 22432301..22433056 127..882 99 -> Minus
arm_2L 22433110..22433225 10..126 96   Minus

BO04595.5prime Sequence

867 bp (696 high quality bases) assembled on 2005-12-01

> BO04595.5prime
GAAGTTATCAGTCGACATGAACCCGTACAATAAGTTTCAAGATATGGTTT
TAAAGCAATGGTTGGTCATGGATGATGCACTTTTCCAAGCATGTGGGTTT
TGTCTAGTTGCGGCATCTGATGACCAGTCGGTGTTTATCACTTGGGACAA
GTATTATTTGCTAAACATACGCTTTAAGATGCCAGAGGACAGCTGCAGGA
TAAAAATGACTGCTGTGCGAATTCCTGTGCCTAAAAGTGGAGGAGGCTAT
ATTAGGAGTGTGCATGCTTTGAGGTACAATACGATTCTGCATATGTCGAA
TGGGGAGTTATACAGCTTTACCTCATTTAAGGCCCTGAATCTTATAAAAT
GGCTCAATGCAGTTCGTTGTTTAGCTATAGTCGATGTGGGATTCAGCGTG
ATTCGAATAGAGAATCGCCGACTGCTGCTGCAGACGTATGTTGATCTTCC
TGATTGGGAAAAGGACAAGTGTACACTGCAACATTCATTTGACATAACTT
TTGACCAGGAGAACATATTTCAGAGCGACTGGCAGCATAACGAATACACT
CTGACAACTTTAAAAGTGACCGAAAAGGAAGAAGAGTTCGCACGAACTCT
TTTCGGCACAAGAGCGGCAGAACAAAATTATATTCACATATTCAGCATAG
GTGGACATGTATTTGCGTTGGCTTATAATTACAAAACAACATCAGATAGT
ACCGGTCCTGACTATAATATCGAGCTCCTGTGCATTTATGCAGCGCACGT
TAAATTCATTAAACTGCTACCAATGGAGAACCTTTGTTTGATTTTTCTCG
GCTCTGGCAGTATAGACATGTGGTACACGTCCAGGCTCCTTTCTATAAAA
CAGCGTCAAATTTTTCA

BO04595.5prime Blast Records

Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 12:08:27
Subject Length Description Subject Range Query Range Score Percent Strand
CG17490-PB 2145 CG17490-RB 21..872 16..867 4260 100 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-13 05:37:06
Subject Length Description Subject Range Query Range Score Percent Strand
CG17490-RG 2877 CG17490-RG 644..1495 16..867 4260 100 Plus
CG17490-RE 2315 CG17490-RE 82..933 16..867 4260 100 Plus
CG17490-RF 2953 CG17490-RF 334..875 326..867 2695 99.8 Plus
Blast to na_all.dmel.RELEASE6 performed 2015-02-13 05:37:05
Subject Length Description Subject Range Query Range Score Percent Strand
2L 23513712 2L 22538311..22539162 16..867 4260 100 Plus
Blast to na_te.dros performed on 2015-02-13 05:37:06 has no hits.

BO04595.5prime Sim4 Records

Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-11 12:37:51 Download gff for BO04595.5prime
Subject Subject Range Query Range Percent Splice Strand
CG17490-PB 14..871 9..866 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-09-01 17:54:32 Download gff for BO04595.5prime
Subject Subject Range Query Range Percent Splice Strand
CG17490-RE 75..932 9..866 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-13 07:51:35 Download gff for BO04595.5prime
Subject Subject Range Query Range Percent Splice Strand
CG17490-RE 75..932 9..866 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-13 07:51:35 Download gff for BO04595.5prime
Subject Subject Range Query Range Percent Splice Strand
2L 22538304..22539161 9..866 99   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-09-01 17:54:32 Download gff for BO04595.5prime
Subject Subject Range Query Range Percent Splice Strand
arm_2L 22431036..22431893 9..866 99   Plus

BO04595.complete Sequence

2155 bp assembled on 2010-02-24

GenBank Submission: KX795055

> BO04595.complete
GAAGTTATCAGTCGACATGAACCCGTACAATAAGTTTCAAGATATGGTTT
TAAAGCAATGGTTGGTCATGGATGATGCACTTTTCCAAGCATGTGGGTTT
TGTCTAGTTGCGGCATCTGATGACCAGTCGGTGTTTATCACTTGGGACAA
GTATTATTTGCTAAACATACGCTTTAAGATGCCAGAGGACAGCTGCAGGA
TAAAAATGACTGCTGTGCGAATTCCTGTGCCTAAAAGTGGAGGAGGCTAT
ATTAGGAGTGTGCATGCTTTGAGGTACAATACGATTCTGCATATGTCGAA
TGGGGAGTTATACAGCTTTACCTCATTTAAGGCCCTGAATCTTATAAAAT
GGCTCAATGCAGTTCGTTGTTTAGCTATAGTCGATGTGGGATTCAGCGTG
ATTCGAATAGAGAATCGCCGACTGCTGCTGCAGACGTATGTTGATCTTCC
TGATTGGGAAAAGGACAAGTGTACACTGCAACATTCATTTGACATAACTT
TTGACCAGGAGAACATATTTCAGAGCGACTGGCAGCATAACGAATACACT
CTGACAACTTTAAAAGTGACCGAAAAGGAAGAAGAGTTCGCACGAACTCT
TTTCGGCACAAGAGCGGCAGAACAAAATTATATTCACATATTCAGCATAG
GTGGACATGTATTTGCGTTGGCTTATAATTACAAAACAACATCAGATAGT
ACCGGTCCTGACTATAATATCGAGCTCCTGTGCATTTATGCAGCGCACGT
TAAATTCATTAAACTGCTACCAATGGAGAACCTTTGTTTGATTTTTCTCG
GCTCTGGCAGTATAGACATGTGGTACACGTCCAGGCTCCTTTCTATAAAA
CAGCGTCAAATTTTTCACACAGGTGCTGAATGGCTGGACTACGATGCAAC
AAGTGCCAATGGCGACGTCTATTACACAGACGGGAACCAGCTAGTGCGAC
TGCGATTCAAATACAACGCCCAGCTTGACGAGTGTTTTGTCTACACCTTG
ACGAAGCCAGTCTCCGGGATATACGCATGCTGTTGGATAGACCAAAAAGA
AGAATTGTTCTGCCTGAGCGACAACAACACACTTTATTGCATTTCTTTTG
GGATGTCCGAAATGAACGATCAAACGCTGAGAATTTCAACGCCGAACTTT
GCACCATCAGCTTTGATGAGACTGCAGCACAATGCCGAAGCCTTGCAGGA
ATATAAAAAACATCCTGATTCACTAAGGCAAAAATTATATAGGGAGTATA
AGCAACAGCAGCTTATATCTATGAGTAAAAATATCCGGAGAGTAAATGCG
GCCATTAAAACCTCACTGGAATACCACCTTCAAGTACCTATTGATATTGT
CAGGGATAATGTTCTTCTACAGGCAGCGCAGAGTCTAGATCTTGATCAGA
AAAGCTGTATATACGCTGTGCTTAACGTCAGACTTATCGATAGCCGGCCC
CTATTGCAGGGGACATTTTGGAAGCTTTTGATATGCTATGACAACCGCAT
CAATGTCCTCCTACTGCCCACAGAAGTACTTGTTAATAAAAAATGTTGCG
TGGTTATAGCGTTAAGTAAAATGAAAAACGAGCATCTGCCTCATTTTAAA
ATCCAGCTTCTGCAACTTGTGGAACTTAATGAGCAATCATGTGCTGTACT
TTTTCAGGTACCGGTAGAAAGTTGTGGAAATACATTCCGAGCAATTTTCA
GTGGAAGAATAGTACCTGCGAAATACAGGTTGAACAATAAGCAATTTATG
GAAAGGAAACCAAGTATACCAAAAATCAGGCAGGTCAGCAGTCTTGGAAG
TCAATTCACTTTTCCCAATATAGCGGATCTATTTTGCAATGCCGTCTCCA
TTCACAATGACTATTGTAAATTGCATTTTATAAACGAAAAGTTGCAATTC
CATTTAAATGGAATGTTGGAAAGTAAAGATGCTTCAGCGATTTACTATTT
TAAGCAACATATTATTCTAAACTCGGATCAACTGGAATCTGCATCCAAAA
ATTATGACATGACCTTTCATACAATAATGAGCGACGTTGACCGATTTCGG
TACCGACAATGTAACGACATCTTGGCCCCTGGAACAAATTTTTCCGTTTT
AAAGTCAAAATATAATATCATTAGAAATGACATTCATGCAAGCTTTCTAG
ACCAT

BO04595.complete Blast Records

Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 04:27:21
Subject Length Description Subject Range Query Range Score Percent Strand
CG17490-RG 2124 CG17490-PG 1..2121 17..2137 10605 100 Plus
CG17490-RE 2124 CG17490-PE 1..2121 17..2137 10605 100 Plus
CG17490-RF 393 CG17490-PF 1..390 1748..2137 1950 100 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 04:27:22
Subject Length Description Subject Range Query Range Score Percent Strand
CG17490-RG 2877 CG17490-RG 644..2765 16..2137 10610 100 Plus
CG17490-RE 2315 CG17490-RE 82..2203 16..2137 10610 100 Plus
CG17490-RF 2953 CG17490-RF 334..2145 326..2137 9045 99.9 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 04:27:20
Subject Length Description Subject Range Query Range Score Percent Strand
2L 23513712 2L 22538311..22540324 16..2029 10070 100 Plus
2L 23513712 2L 22540377..22540485 2029..2137 545 100 Plus
Blast to na_te.dros performed on 2014-11-28 04:27:20 has no hits.

BO04595.complete Sim4 Records

Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-02-24 09:36:34 Download gff for BO04595.complete
Subject Subject Range Query Range Percent Splice Strand
CG17490-RB 23..2143 17..2139 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 21:59:37 Download gff for BO04595.complete
Subject Subject Range Query Range Percent Splice Strand
CG17490-RE 83..2203 17..2139 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 05:29:08 Download gff for BO04595.complete
Subject Subject Range Query Range Percent Splice Strand
CG17490-RE 83..2203 17..2139 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 05:29:08 Download gff for BO04595.complete
Subject Subject Range Query Range Percent Splice Strand
2L 22538312..22540324 17..2029 100 -> Plus
2L 22540378..22540485 2030..2139 98   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 21:59:37 Download gff for BO04595.complete
Subject Subject Range Query Range Percent Splice Strand
arm_2L 22431044..22433056 17..2029 100 -> Plus
arm_2L 22433110..22433217 2030..2139 98   Plus

BO04595.pep Sequence

Translation from 16 to 2155

> BO04595.pep
MNPYNKFQDMVLKQWLVMDDALFQACGFCLVAASDDQSVFITWDKYYLLN
IRFKMPEDSCRIKMTAVRIPVPKSGGGYIRSVHALRYNTILHMSNGELYS
FTSFKALNLIKWLNAVRCLAIVDVGFSVIRIENRRLLLQTYVDLPDWEKD
KCTLQHSFDITFDQENIFQSDWQHNEYTLTTLKVTEKEEEFARTLFGTRA
AEQNYIHIFSIGGHVFALAYNYKTTSDSTGPDYNIELLCIYAAHVKFIKL
LPMENLCLIFLGSGSIDMWYTSRLLSIKQRQIFHTGAEWLDYDATSANGD
VYYTDGNQLVRLRFKYNAQLDECFVYTLTKPVSGIYACCWIDQKEELFCL
SDNNTLYCISFGMSEMNDQTLRISTPNFAPSALMRLQHNAEALQEYKKHP
DSLRQKLYREYKQQQLISMSKNIRRVNAAIKTSLEYHLQVPIDIVRDNVL
LQAAQSLDLDQKSCIYAVLNVRLIDSRPLLQGTFWKLLICYDNRINVLLL
PTEVLVNKKCCVVIALSKMKNEHLPHFKIQLLQLVELNEQSCAVLFQVPV
ESCGNTFRAIFSGRIVPAKYRLNNKQFMERKPSIPKIRQVSSLGSQFTFP
NIADLFCNAVSIHNDYCKLHFINEKLQFHLNGMLESKDASAIYYFKQHII
LNSDQLESASKNYDMTFHTIMSDVDRFRYRQCNDILAPGTNFSVLKSKYN
IIRNDIHASFLDH

BO04595.pep Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 05:22:05
Subject Length Description Subject Range Query Range Score Percent Strand
CG17490-PG 707 CG17490-PG 1..707 1..707 3727 100 Plus
CG17490-PE 707 CG17490-PE 1..707 1..707 3727 100 Plus
CG17490-PF 130 CG17490-PF 1..130 578..707 686 100 Plus
CG17490-PA 130 CG17490-PA 1..130 578..707 686 100 Plus
CG17490-PC 134 CG17490-PC 2..125 548..671 652 100 Plus