Clone BO04633 Report

Search the DGRC for BO04633

Clone and Library Details

Library:BO
Tissue Source:D. melanogaster
Created by:Joe Carlson
Date Registered:2004-06-03
Comments:Infusion clones with open reading frames
Original Plate Number:46
Well:33
Vector:pDNR-Dual
Associated Gene/TranscriptCG8924-RB
Protein status:BO04633.pep: full length peptide match
Sequenced Size:1576

Clone Sequence Records

BO04633.3prime Sequence

959 bp (863 high quality bases) assembled on 2005-12-01

> BO04633.3prime
ATGGTCTAGAAAGCTTGCGATCATGTGCAGCTTCTGATCGTTGAGTTTGA
ATGCCGCCGCATCGCTATGGAGGTGAAAAGGCACAATATCACCTGTTGTG
GCCATATCAAATGATGGTGACATAGACGTTGCCGTTGCAGTTGCCGGACT
ATTGCTGCCACTGGTATTTGCGATGCCCGCCTTGAGATGTAGGCTGTCCA
TGGACATTTGCTGAGACTGCGTGTGAGGAAGGGGATTGGTGTGGATATGC
GGATGGGCTGGGGGATGAGTTATGCTCGCTGGGACGGTTGAGAGTTTTCC
TGAGTTTGTTGTGATTATTATGTTTCCGGCATGGGAAGCACCACGTCCAC
GTTTCCGCTTCGGAAGAATTCCTTTTCGCGCCATATAGAAACGAATGGTT
GAGACAGGAATATTGAACATATTGCTGACAGTTTGGAATGTCTCGCCCTT
CGAAACACATTTGGCCGCTTGTGCTAGAGATGCTTCTGAACGTCGAACGC
GCTTATATGAAGTATAACCATCGATCGAGCTATGGCTCAGTCCTCCGGAA
GTATTGGCCGATGTATCGAGATCAGTGTCAAGGCTGAGGGATAGCCCGGA
TCCGCATGGCACTCCTGTCGCAAAACTGCTGTCATTGTTTTCATCATGAG
CGGCCACATAGTTGTGGTCGTCCTCAACATTTGAATCCAAGTATTGCTGC
TGCTGAAGCTGCATTTGCATCCTCGCCTGCTGCAGGGATAGGTGGACATT
CATTTTGTTGTCAACGGCTTGCGCAGATATATTGCAATCATCGAATTGCT
CCCCGTAGGCATTCCAATTGTTCGGCACCTCGTCGCCGGAGTCATCCTCG
GTTGGTGCATTCGAGTGGCTGCCCAAACGTTCGTAGAGGTGGCCTTAGAT
GGCTGTTGAACATTACTGCCATTTAATCTGGGGTCCCTGCTGCACCTGCT
GCTGCTGCT

BO04633.3prime Blast Records

Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 12:08:59
Subject Length Description Subject Range Query Range Score Percent Strand
CG8924-PB 1545 CG8924-RB 684..1542 877..19 4295 100 Minus
CG8924-PA 1545 CG8924-RA 684..1542 877..19 4295 100 Minus
CG8924-PB 1545 CG8924-RB 635..685 925..875 230 98 Minus
CG8924-PA 1545 CG8924-RA 635..685 925..875 230 98 Minus
CG8924-PB 1545 CG8924-RB 602..635 959..926 145 97 Minus
CG8924-PA 1545 CG8924-RA 602..635 959..926 145 97 Minus
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-13 00:23:28
Subject Length Description Subject Range Query Range Score Percent Strand
CG8924-RB 2575 CG8924-RB 1238..2178 959..19 4630 99.6 Minus
Blast to na_all.dmel.RELEASE6 performed 2015-02-13 00:23:21
Subject Length Description Subject Range Query Range Score Percent Strand
X 23542271 X 15943348..15944052 723..19 3525 100 Minus
X 23542271 X 15943053..15943291 959..721 1070 98.3 Minus
Blast to na_te.dros performed 2015-02-13 00:23:24
Subject Length Description Subject Range Query Range Score Percent Strand
baggins 5453 baggins BAGGINS 5453bp 1368..1426 607..550 112 67.8 Minus

BO04633.3prime Sim4 Records

Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 02:07:24 Download gff for BO04633.3prime
Subject Subject Range Query Range Percent Splice Strand
CG8924-PA 602..1545 15..959 99   Minus
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 00:22:23 Download gff for BO04633.3prime
Subject Subject Range Query Range Percent Splice Strand
CG8924-PA 602..1545 15..959 99   Minus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-31 20:31:56 Download gff for BO04633.3prime
Subject Subject Range Query Range Percent Splice Strand
CG8924-RB 1238..2181 15..959 99   Minus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-13 02:43:04 Download gff for BO04633.3prime
Subject Subject Range Query Range Percent Splice Strand
CG8924-RB 1238..2181 15..959 99   Minus
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-13 02:43:04 Download gff for BO04633.3prime
Subject Subject Range Query Range Percent Splice Strand
X 15943053..15943290 722..959 98 -> Minus
X 15943350..15944055 15..721 99   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-31 20:31:56 Download gff for BO04633.3prime
Subject Subject Range Query Range Percent Splice Strand
arm_X 15837086..15837323 722..959 98 -> Minus
arm_X 15837383..15838088 15..721 99   Minus

BO04633.5prime Sequence

935 bp (885 high quality bases) assembled on 2005-11-29

> BO04633.5prime
GAAGTTATCAGTCGACATGAGCGGCGCTACACAGGAATTTTGTGTACGCT
GGAACAGCCATTTGGGCAGCATTGGAGCTGCTTTTCCGCAGCTGCTAGCA
GGCCAGAGATTCGTGGATGTAACACTCGCATGCGAAGGCCAACAGGTGCA
CTGCCATCGTCTGGTGTTGGCCGCTTGTTCCACCTACTTTGAGGCAATAC
TAGCGGAGCATCCTTGCAAGCACCCGGTCATCATATTGCCCAGGGAGATC
AAGCTATGGGAGATCCAGGCGCTTGTGGACTTCATGTACAAGGGAGAGGT
CAATGTCACGCAAGCCGGTCTTGGCCAGTTGCTTCGCTGTGCCGAACAAC
TGCAGATTCGCGGTCTATACGGCTCTGAGGCACCGATAAACTACAAGAAA
CTCCAGCAGGCGAGTCTCGAGGCTGCTAAGGATCCAGCTGCAACCACAGC
GCGAAGCTTCAAGCATGTGGACAGCGCGGAAACGGACGATGCAGCCACTA
ATTCAACCACCTCAACAACAATGACCACCTCCTCCGCTCCACCGCTACCG
GTTAACCATCAGCAACCCACAGTATTGAAGCGCCAGAATCCCGATGCTCG
GCAGCAGCAGCAACAGCAGCAGCAGCAGCAGGTGCAGCAGCGACCCCAGA
TAAATGGCAGTAATGCTCAACAGCCATCTAAGGCCACCTCTACGAACGTT
TTGGGCAGCCACTCGAATGCACCAACCGAGGATGACTCCGGCGACGAGGT
GCCGAACAATTGGAATGCCTACGGGGAGCAATTCGATGATTGCAATATAT
CTGCGCAAGCCGTTGACAACAAAATGAATGTCCACCTATCCCTGCAGCAN
GCGAGGATGCAAATGCAGCTTCAGCAGCAGCAATACTTGGGATCAAATGG
TGAGGACGACCACAACTATGTGGCCGCTCATGATG

BO04633.5prime Blast Records

Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 12:08:59
Subject Length Description Subject Range Query Range Score Percent Strand
CG8924-PB 1545 CG8924-RB 1..919 17..935 4501 99.5 Plus
CG8924-PA 1545 CG8924-RA 1..919 17..935 4501 99.5 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-11 04:46:23
Subject Length Description Subject Range Query Range Score Percent Strand
CG8924-RB 2575 CG8924-RB 637..1555 17..935 4539 99.6 Plus
Blast to na_all.dmel.RELEASE6 performed 2015-02-11 04:46:20
Subject Length Description Subject Range Query Range Score Percent Strand
X 23542271 X 15942452..15943291 17..856 4189 99.9 Plus
X 23542271 X 15943348..15943429 854..935 365 96.3 Plus
Blast to na_te.dros performed on 2015-02-11 04:46:22 has no hits.

BO04633.5prime Sim4 Records

Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 02:07:25 Download gff for BO04633.5prime
Subject Subject Range Query Range Percent Splice Strand
CG8924-PA 1..919 17..935 99   Plus
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 00:22:24 Download gff for BO04633.5prime
Subject Subject Range Query Range Percent Splice Strand
CG8924-PA 1..919 17..935 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-23 06:13:19 Download gff for BO04633.5prime
Subject Subject Range Query Range Percent Splice Strand
CG8924-RB 626..1555 5..935 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-11 09:28:41 Download gff for BO04633.5prime
Subject Subject Range Query Range Percent Splice Strand
CG8924-RB 626..1555 5..935 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-11 09:28:41 Download gff for BO04633.5prime
Subject Subject Range Query Range Percent Splice Strand
X 15943350..15943429 856..935 96   Plus
X 15942441..15943290 5..855 99 -> Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-23 06:13:19 Download gff for BO04633.5prime
Subject Subject Range Query Range Percent Splice Strand
arm_X 15836474..15837323 5..855 99 -> Plus
arm_X 15837383..15837462 856..935 96   Plus

BO04633.complete Sequence

1576 bp (1576 high quality bases) assembled on 2005-09-08

GenBank Submission: FJ629818

> BO04633.complete
GAAGTTATCAGTCGACATGAGCGGCGCTACACAGGAATTTTGTGTACGCT
GGAACAGCCATTTGGGCAGCATTGGAGCTGCTTTTCCGCAGCTGCTAGCA
GGCCAGAGATTCGTGGATGTAACACTCGCATGCGAAGGCCAACAGGTGCA
CTGCCATCGTCTGGTGTTGGCCGCTTGTTCCACCTACTTTGAGGCAATAC
TAGCGGAGCATCCTTGCAAGCACCCGGTCATCATATTGCCCAGGGAGATC
AAGCTATGGGAGATCCAGGCGCTTGTGGACTTCATGTACAAGGGAGAGGT
CAATGTCACGCAAGCCGGTCTTGGCCAGTTGCTTCGCTGTGCCGAACAAC
TGCAGATTCGCGGTCTATACGGCTCTGAGGCACCGATAAACTACAAGAAA
CTCCAGCAGGCGAGTCTCGAGGCTGCTAAGGATCCAGCTGCAACCACAGC
GCGAAGCTTCAAGCATGTGGACAGCGCGGAAACGGACGATGCAGCCACTA
ATTCAACCACCTCAACAACAATGACCACCTCCTCCGCTCCACCGCTACCG
GTTAACCATCAGCAACCCACAGTATTGAAGCGCCAGAATCCCGATGCTCG
GCAGCAGCAGCAACAGCAGCAGCAGCAGCAGGTGCAGCAGCGACCCCAGA
TAAATGGCAGTAATGCTCAACAGCCATCTAAGGCCACCTCTACGAACGTT
TTGGGCAGCCACTCGAATGCACCAACCGAGGATGACTCCGGCGACGAGGT
GCCGAACAATTGGAATGCCTACGGGGAGCAATTCGATGATTGCAATATAT
CTGCGCAAGCCGTTGACAACAAAATGAATGTCCACCTATCCCTGCAGCAG
GCGAGGATGCAAATGCAGCTTCAGCAGCAGCAATACTTGGATTCAAATGT
TGAGGACGACCACAACTATGTGGCCGCTCATGATGAAAACAATGACAGCA
GTTTTGCGACAGGAGTGCCATGCGGATCCGGGCTATCCCTCAGCCTTGAC
ACTGATCTCGATACATCGGCCAATACTTCCGGAGGACTGAGCCATAGCTC
GATCGATGGTTATACTTCATATAAGCGCGTTCGACGTTCAGAAGCATCTC
TAGCACAAGCGGCCAAATGTGTTTCGAAGGGCGAGACATTCCAAACTGTC
AGCAATATGTTCAATATTCCTGTCTCAACCATTCGTTTCTATATGGCGCG
AAAAGGAATTCTTCCGAAGCGGAAACGTGGACGTGGTGCTTCCCATGCCG
GAAACATAATAATCACAACAAACTCAGGAAAACTCTCAACCGTCCCAGCG
AGCATAACTCATCCCCCAGCCCATCCGCATATCCACACCAATCCCCTTCC
TCACACGCAGTCTCAGCAAATGTCCATGGACAGCCTACATCTCAAGGCGG
GCATCGCAAATACCAGTGGCAGCAATAGTCCGGCAACTGCAACGGCAACG
TCTATGTCACCATCATTTGATATGGCCACAACAGGTGATATTGTGCCTTT
TCACCTCCATAGCGATGCGGCGGCATTCAAACTCAACGATCAGAAGCTGC
ACATGATCGCAAGCTTTCTAGACCAT

BO04633.complete Blast Records

Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 01:03:40
Subject Length Description Subject Range Query Range Score Percent Strand
CG8924-RB 1545 CG8924-PB 1..1542 17..1558 7710 100 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 01:03:41
Subject Length Description Subject Range Query Range Score Percent Strand
CG8924-RB 2575 CG8924-RB 637..2178 17..1558 7710 100 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 01:03:38
Subject Length Description Subject Range Query Range Score Percent Strand
X 23542271 X 15942452..15943291 17..856 4200 100 Plus
X 23542271 X 15943348..15944052 854..1558 3525 100 Plus
Blast to na_te.dros performed on 2014-11-28 01:03:39 has no hits.

BO04633.complete Sim4 Records

Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-21 22:39:59 Download gff for BO04633.complete
Subject Subject Range Query Range Percent Splice Strand
CG8924-RA 1..1545 17..1562 99   Plus
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-11 07:08:58 Download gff for BO04633.complete
Subject Subject Range Query Range Percent Splice Strand
CG8924-RA 796..2351 5..1562 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 20:37:50 Download gff for BO04633.complete
Subject Subject Range Query Range Percent Splice Strand
CG8924-RB 637..2178 17..1560 99   Plus
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 22:39:59 Download gff for BO04633.complete
Subject Subject Range Query Range Percent Splice Strand
CG8924-RA 796..2351 5..1562 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 01:43:30 Download gff for BO04633.complete
Subject Subject Range Query Range Percent Splice Strand
CG8924-RB 637..2178 17..1560 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 01:43:30 Download gff for BO04633.complete
Subject Subject Range Query Range Percent Splice Strand
X 15942452..15943290 17..855 100 -> Plus
X 15943350..15944052 856..1560 99   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 20:37:50 Download gff for BO04633.complete
Subject Subject Range Query Range Percent Splice Strand
arm_X 15836485..15837323 17..855 100 -> Plus
arm_X 15837383..15838085 856..1560 99   Plus

BO04633.pep Sequence

Translation from 16 to 1576

> BO04633.pep
MSGATQEFCVRWNSHLGSIGAAFPQLLAGQRFVDVTLACEGQQVHCHRLV
LAACSTYFEAILAEHPCKHPVIILPREIKLWEIQALVDFMYKGEVNVTQA
GLGQLLRCAEQLQIRGLYGSEAPINYKKLQQASLEAAKDPAATTARSFKH
VDSAETDDAATNSTTSTTMTTSSAPPLPVNHQQPTVLKRQNPDARQQQQQ
QQQQQVQQRPQINGSNAQQPSKATSTNVLGSHSNAPTEDDSGDEVPNNWN
AYGEQFDDCNISAQAVDNKMNVHLSLQQARMQMQLQQQQYLDSNVEDDHN
YVAAHDENNDSSFATGVPCGSGLSLSLDTDLDTSANTSGGLSHSSIDGYT
SYKRVRRSEASLAQAAKCVSKGETFQTVSNMFNIPVSTIRFYMARKGILP
KRKRGRGASHAGNIIITTNSGKLSTVPASITHPPAHPHIHTNPLPHTQSQ
QMSMDSLHLKAGIANTSGSNSPATATATSMSPSFDMATTGDIVPFHLHSD
AAAFKLNDQKLHMIASFLDH

BO04633.pep Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 18:35:23
Subject Length Description Subject Range Query Range Score Percent Strand
CG8924-PB 514 CG8924-PB 1..514 1..514 2673 100 Plus
br-PL 514 CG11491-PL 4..239 5..236 353 34.7 Plus
br-PJ 514 CG11491-PN 4..239 5..236 353 34.7 Plus
br-PO 663 CG11491-PO 4..239 5..236 353 34.7 Plus
br-PG 663 CG11491-PG 4..239 5..236 353 34.7 Plus