Clone BO04637 Report

Search the DGRC for BO04637

Clone and Library Details

Library:BO
Tissue Source:D. melanogaster
Created by:Joe Carlson
Date Registered:2004-06-03
Comments:Infusion clones with open reading frames
Original Plate Number:46
Well:37
Vector:pDNR-Dual
Associated Gene/TranscriptCG2608-RA
Protein status:BO04637.pep: validated full length
Sequenced Size:799

Clone Sequence Records

BO04637.3prime Sequence

797 bp (796 high quality bases) assembled on 2005-12-01

> BO04637.3prime
ATGGTCTAGAAAGCTTGCTGGGTCCTCTGTGGATGTGGTTGCCTCTTGCG
CTTGCTGCTCTTGCTCCAGCTCCTGCTGCTGAGCCAATCGCAGACGCTTT
TTGGCCTGGATGTCGGCCAAAGTTTGTTCGATGGAGCGCACATCCTTCTT
ATTCTTGCTAGGCACGAATCCGTAGCTTTGGTTGGTCTCCGTCTTACGGG
CCGCCTGCAGTGCGGCCGACTCTCCGATGAGGTGGGCATACTTGGCCTTG
TAGTTGGTCGTGGGCTTAACTTCGCCGGAGTCCTGATCCGCTGATGTGGA
TGTGGACGAGCCTGAACTTGCTGCTTCGGATGTGGAGGCTTCTTTGTCAC
TTTGCTCCTGCGCCAATCGTTCCCGCCGTCGCTCCGCGTACTCCTTGGCT
ATCTCCTCGTTCCAACCGTCTCCGTTCCGACGGGCCGTGACCTCATCCTC
GCCAGGAGCGTGTTCCTTTTTGTACACAACCGAATGTCGGTCCACATCCT
CGCGGCCAAAGCTCATGGCAATGAAGCCGCCATTTTCGGCTACTTCGTGG
ATCACCGAGCGATGCACTTTATCCAGCGGCTGAAACTCGATGCATCGCCT
GTCGTCCTTGGCGAATCGCCCCATCCGTTCGTCTACATATTTTCGGAATC
GGAGGAGCTCCTCTTTCTGTTTGTTCTGCATCCGCTCTAACATTTCGCGC
TGTTTCTTGATCAGCGTCTTCTGTTGCTCGTTGTTGGCAGGCGGCGCATC
CATGGCGTTGAGTATTGAGTCGAGCAGATCCATGTCGACTGATAACT

BO04637.3prime Blast Records

Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 12:09:02
Subject Length Description Subject Range Query Range Score Percent Strand
CG2608-PA 768 CG2608-RA 1..765 783..19 3825 100 Minus
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-13 02:10:00
Subject Length Description Subject Range Query Range Score Percent Strand
CG2608-RA 1477 CG2608-RA 191..955 783..19 3825 100 Minus
Blast to na_all.dmel.RELEASE6 performed 2015-02-13 02:09:55
Subject Length Description Subject Range Query Range Score Percent Strand
2L 23513712 2L 20646095..20646859 783..19 3825 100 Minus
Blast to na_te.dros performed 2015-02-13 02:09:57
Subject Length Description Subject Range Query Range Score Percent Strand
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 6809..6873 81..16 120 66.7 Minus

BO04637.3prime Sim4 Records

Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 02:07:27 Download gff for BO04637.3prime
Subject Subject Range Query Range Percent Splice Strand
CG2608-PA 1..768 16..783 99   Minus
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 00:22:29 Download gff for BO04637.3prime
Subject Subject Range Query Range Percent Splice Strand
CG2608-PA 1..768 16..783 99   Minus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-09-01 06:34:57 Download gff for BO04637.3prime
Subject Subject Range Query Range Percent Splice Strand
CG2608-RA 191..955 19..783 100   Minus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-13 03:26:15 Download gff for BO04637.3prime
Subject Subject Range Query Range Percent Splice Strand
CG2608-RA 191..955 19..783 100   Minus
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-13 03:26:15 Download gff for BO04637.3prime
Subject Subject Range Query Range Percent Splice Strand
2L 20646095..20646862 14..783 99 -> Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-09-01 06:34:57 Download gff for BO04637.3prime
Subject Subject Range Query Range Percent Splice Strand
arm_2L 20646095..20646862 14..783 99 -> Minus

BO04637.5prime Sequence

797 bp (796 high quality bases) assembled on 2005-11-29

> BO04637.5prime
GAAGTTATCAGTCGACATGGATCTGCTCGACTCAATACTCAACGCCATGG
ATGCGCCGCCTGCCAACAACGAGCAACAGAAGACGCTGATCAAGAAACAG
CGCGAAATGTTAGAGCGGATGCAGAACAAACAGAAAGAGGAGCTCCTCCG
ATTCCGAAAATATGTAGACGAACGGATGGGGCGATTCGCCAAGGACGACA
GGCGATGCATCGAGTTTCAGCCGCTGGATAAAGTGCATCGCTCGGTGATC
CACGAAGTAGCCGAAAATGGCGGCTTCATTGCCATGAGCTTTGGCCGCGA
GGATGTGGACCGACATTCGGTTGTGTACAAAAAGGAACACGCTCCTGGCG
AGGATGAGGTCACGGCCCGTCGGAACGGAGACGGTTGGAACGAGGAGATA
GCCAAGGAGTACGCGGAGCGACGGCGGGAACGATTGGCGCAGGAGCAAAG
TGACAAAGAAGCCTCCACATCCGAAGCAGCAAGTTCAGGCTCGTCCACAT
CCACATCAGCGGATCAGGACTCCGGCGAAGTTAAGCCCACGACCAACTAC
AAGGCCAAGTATGCCCACCTCATCGGAGAGTCGGCCGCACTGCAGGCGGC
CCGTAAGACGGAGACCAACCAAAGCTACGGATTCGTGCCTAGCAAGAATA
AGAAGGATGTGCGCTCCATCGAACAAACTTTGGCCGACATCCAGGCCAAA
AAGCGTCTGCGATTGGCTCAGCAGCAGGAGCTGGAGCAAGAGCAGCAAGC
GCAAGAGGCAACCACATCCACAGAGGACCCAGCAAGCTTTCTAGACC

BO04637.5prime Blast Records

Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 12:09:03
Subject Length Description Subject Range Query Range Score Percent Strand
CG2608-PA 768 CG2608-RA 1..765 17..781 3825 100 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-13 15:19:39
Subject Length Description Subject Range Query Range Score Percent Strand
CG2608-RA 1477 CG2608-RA 191..955 17..781 3825 100 Plus
Blast to na_all.dmel.RELEASE6 performed 2015-02-13 15:19:34
Subject Length Description Subject Range Query Range Score Percent Strand
2L 23513712 2L 20646095..20646859 17..781 3825 100 Plus
Blast to na_te.dros performed 2015-02-13 15:19:36
Subject Length Description Subject Range Query Range Score Percent Strand
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 6809..6873 719..784 120 66.7 Plus

BO04637.5prime Sim4 Records

Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 02:07:28 Download gff for BO04637.5prime
Subject Subject Range Query Range Percent Splice Strand
CG2608-PA 1..768 17..784 99   Plus
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 00:22:30 Download gff for BO04637.5prime
Subject Subject Range Query Range Percent Splice Strand
CG2608-PA 1..768 17..784 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-09-03 11:02:24 Download gff for BO04637.5prime
Subject Subject Range Query Range Percent Splice Strand
CG2608-RA 191..955 17..781 100   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-13 16:57:45 Download gff for BO04637.5prime
Subject Subject Range Query Range Percent Splice Strand
CG2608-RA 191..955 17..781 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-13 16:57:45 Download gff for BO04637.5prime
Subject Subject Range Query Range Percent Splice Strand
2L 20646095..20646862 17..786 99 -> Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-09-03 11:02:24 Download gff for BO04637.5prime
Subject Subject Range Query Range Percent Splice Strand
arm_2L 20646095..20646862 17..786 99 -> Plus

BO04637.complete Sequence

799 bp (799 high quality bases) assembled on 2005-09-08

GenBank Submission: FJ629820

> BO04637.complete
GAAGTTATCAGTCGACATGGATCTGCTCGACTCAATACTCAACGCCATGG
ATGCGCCGCCTGCCAACAACGAGCAACAGAAGACGCTGATCAAGAAACAG
CGCGAAATGTTAGAGCGGATGCAGAACAAACAGAAAGAGGAGCTCCTCCG
ATTCCGAAAATATGTAGACGAACGGATGGGGCGATTCGCCAAGGACGACA
GGCGATGCATCGAGTTTCAGCCGCTGGATAAAGTGCATCGCTCGGTGATC
CACGAAGTAGCCGAAAATGGCGGCTTCATTGCCATGAGCTTTGGCCGCGA
GGATGTGGACCGACATTCGGTTGTGTACAAAAAGGAACACGCTCCTGGCG
AGGATGAGGTCACGGCCCGTCGGAACGGAGACGGTTGGAACGAGGAGATA
GCCAAGGAGTACGCGGAGCGACGGCGGGAACGATTGGCGCAGGAGCAAAG
TGACAAAGAAGCCTCCACATCCGAAGCAGCAAGTTCAGGCTCGTCCACAT
CCACATCAGCGGATCAGGACTCCGGCGAAGTTAAGCCCACGACCAACTAC
AAGGCCAAGTATGCCCACCTCATCGGAGAGTCGGCCGCACTGCAGGCGGC
CCGTAAGACGGAGACCAACCAAAGCTACGGATTCGTGCCTAGCAAGAATA
AGAAGGATGTGCGCTCCATCGAACAAACTTTGGCCGACATCCAGGCCAAA
AAGCGTCTGCGATTGGCTCAGCAGCAGGAGCTGGAGCAAGAGCAGCAAGC
GCAAGAGGCAACCACATCCACAGAGGACCCAGCAAGCTTTCTAGACCAT

BO04637.complete Blast Records

Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-27 14:04:28
Subject Length Description Subject Range Query Range Score Percent Strand
CG2608-RA 768 CG2608-PA 1..765 17..781 3825 100 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 14:04:29
Subject Length Description Subject Range Query Range Score Percent Strand
CG2608-RA 1477 CG2608-RA 191..955 17..781 3825 100 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 14:04:26
Subject Length Description Subject Range Query Range Score Percent Strand
2L 23513712 2L 20646095..20646859 17..781 3825 100 Plus
Blast to na_te.dros performed 2014-11-27 14:04:27
Subject Length Description Subject Range Query Range Score Percent Strand
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 6809..6873 719..784 120 66.7 Plus

BO04637.complete Sim4 Records

Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-21 22:55:59 Download gff for BO04637.complete
Subject Subject Range Query Range Percent Splice Strand
CG2608-RA 1..768 17..784 99   Plus
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-11 07:28:29 Download gff for BO04637.complete
Subject Subject Range Query Range Percent Splice Strand
CG2608-RA 189..953 17..781 100   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 17:32:50 Download gff for BO04637.complete
Subject Subject Range Query Range Percent Splice Strand
CG2608-RA 191..955 17..783 99   Plus
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 22:55:59 Download gff for BO04637.complete
Subject Subject Range Query Range Percent Splice Strand
CG2608-RA 189..953 17..781 100   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 15:02:39 Download gff for BO04637.complete
Subject Subject Range Query Range Percent Splice Strand
CG2608-RA 191..955 17..783 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 15:02:39 Download gff for BO04637.complete
Subject Subject Range Query Range Percent Splice Strand
2L 20646095..20646859 17..783 99   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 17:32:50 Download gff for BO04637.complete
Subject Subject Range Query Range Percent Splice Strand
arm_2L 20646095..20646859 17..783 99   Plus

BO04637.pep Sequence

Translation from 16 to 799

> BO04637.pep
MDLLDSILNAMDAPPANNEQQKTLIKKQREMLERMQNKQKEELLRFRKYV
DERMGRFAKDDRRCIEFQPLDKVHRSVIHEVAENGGFIAMSFGREDVDRH
SVVYKKEHAPGEDEVTARRNGDGWNEEIAKEYAERRRERLAQEQSDKEAS
TSEAASSGSSTSTSADQDSGEVKPTTNYKAKYAHLIGESAALQAARKTET
NQSYGFVPSKNKKDVRSIEQTLADIQAKKRLRLAQQQELEQEQQAQEATT
STEDPASFLDH

BO04637.pep Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 18:27:37
Subject Length Description Subject Range Query Range Score Percent Strand
CG2608-PA 255 CG2608-PA 1..255 1..255 1290 100 Plus