Clone Sequence Records
BO04638.3prime Sequence
915 bp (768 high quality bases) assembled on 2005-12-01
> BO04638.3prime
ATGGTCTAGAAAGCTTGCGAGAGCCACTGCATCGGTGGCCACTGGATGAT
TCTGGACAGCATTTCCCTCCTCGCCGGCATCGTCGTTGACCACAATAACC
TCGTTGGACGGTACGCCAGCATCCTCGAAGGAATCATCAATATTTTCGCC
ACTCGCACGCAGCTCATTATCGGATTCCGGAACGAATTCACCCACCTCAT
CATTGGCAGGATCGATTTTGTCATCTACGGCTGGCTTCTCTGTGGCCTGA
GTGGCTGGTGCGGCAGCTGGTGCGTTCTGTGGACGATTGCCGCCCAGGAA
GTTGATAATTCCCTGCAGAGGATTGCCACTTTGCTGGGCAGGCGGTGCGG
CAGCCGTGGCATTGTTATTGCCACCGAAAACATTGTTGACAAACTGCTGG
ATGGGACCTGGTGGACGCGGAGTGGTGGACACCGCCTGCTGCTGCTGGCC
AGTCAAGCTGGACAGGGTGTTCTGGAACTGATTGCCCAGGTTGCTGGCAA
ACTGTTGGATGCCCTGGAAGGCCTGGGTGGTGGCATTGACGGCACTTTGG
GCCGCATTTTGCACGGCCTGTTGGGCGGAGGTGATGGCGGCCTGGGGATT
CAGGAAACCGGGCACCGTGGGAGCCGGAGTTGCAGGTGCCGCAGCGGCGG
CATCATCCGCCTGGACTTGTGCTGCTGCTGGAGCGGCAGCAGCAGCTGGC
TGGGGCTGGAACTGATTGAGGAACTGACCAATTGGCGAGTTCTGGATCAA
CTGCTGGACAAAGTTGCCCTGGGTGGTGCTCTGCTGGGTGGGCGTGGCTT
GGGTGGCTTGACGGACCTGAGGATGCGCGGCGTCCTGGTTTTCCGACTGC
TCTTGCTCCACCGGATTCGGGGAAAGTTCCTCGGCAGGCACAACGACAGT
CTCTTCAGCTGGCAG
BO04638.3prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 12:09:03
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG1934-PA | 1401 | ImpE2-RA | 502..1398 | 915..19 | 4485 | 100 | Minus |
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-13 13:29:12
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| ImpE2-RA | 1708 | CG1934-RA | 581..1477 | 915..19 | 4485 | 100 | Minus |
Blast to na_all.dmel.RELEASE6 performed 2015-02-13 13:29:10
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3L | 28110227 | 3L | 3511205..3512101 | 19..915 | 4485 | 100 | Plus |
Blast to na_te.dros performed 2015-02-13 13:29:11
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Dmer\R1A3 | 3772 | Dmer\R1A3 MERCR1A3 3772bp | 628..712 | 712..628 | 137 | 62.4 | Minus |
BO04638.3prime Sim4 Records
Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 02:07:29 Download gff for
BO04638.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| ImpE2-PA | 502..1401 | 15..915 | 99 | | Minus |
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 00:22:32 Download gff for
BO04638.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG1934-PA | 502..1401 | 15..915 | 99 | | Minus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-09-02 17:42:32 Download gff for
BO04638.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| ImpE2-RA | 581..1480 | 15..915 | 99 | | Minus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-13 15:38:20 Download gff for
BO04638.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| ImpE2-RA | 581..1480 | 15..915 | 99 | | Minus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-13 15:38:20 Download gff for
BO04638.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3L | 3511202..3512101 | 15..915 | 99 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-09-02 17:42:32 Download gff for
BO04638.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3L | 3511202..3512101 | 15..915 | 99 | | Plus |
BO04638.5prime Sequence
923 bp (829 high quality bases) assembled on 2005-11-29
> BO04638.5prime
GAAGTTATCAGTCGACATGAAGCCCGTTGCCTTGATCCTGGTTTTCCTGG
CCATTAGCCAAGCCAGAGTACTCAACTTGCCCAAGGAGGCGATCGATATT
CCTGTGGCCATTGTCGAGGATAAGGAGCCACCAGTAGCTTTGTCTTTGGT
CAAAGAGGAAGTTAAGGCAGAGGAAGTTAAGCCAGAGGAAGTGAAACCAA
TTGCTCAAGAAGAGAAAGCCAAGGATCTCAAGGAGGAAGTTAAGCCAGAA
ATTAAGCCTGAAATCAAAGAGCAGCCTAAGCCTGATATAAAAGACGAGAT
TAAGGAAGATTTAAAGGCAGACATTAAGGAGGAGCTCAAGGAGAAGATTG
AAGAGCAGATCAACGAGTTGCCTAATGCTAAGCCCCTGGAGCTGAAGGAA
AAATCCCTGGAAGCTGAGGAGAAACCTCAGGAAATCAAAGAAGAAGTTCA
GCAGCCAGAAATCAAAAAAGAGGCCACTGAAATCAAAGAGGAACCTGCTC
AGAACATTCTGAAATCTCTGCCAGCTGAAGAGACTGTCGTTGTGCCTGCC
GAGGAACTTTCCCCGAATCCGGTGGAGCAAGAGCAGTCGGAAAACCAGGA
CGCCGCGCATCCTCAGGTCCGTCAAGCCACCCAAGCCACGCCCACCCAGC
AGAGCACCACCCAGGGCAACTTTGTCCAGCAGTTGATCCAGAACTCGCCA
ATTGGTCAGTTCCTCAATCAGTTCCAGCCCCAGCCAGCTGCTGCTGCCGC
TCCAGCAGCAGCACAAGTCCAGGCGGATGATGCCGCCGCTGCGGCACCTG
CAACTCCGGCTCCCACGGTGCCCGGTTTCCTGAATCCCCAGGCCGCCATC
ACCTCCGCCCCACANGCCGTGCAAAATGCGGCCCCAAGTGCCGTCAATGC
CACCACCCAGGCCTTCCAGGGCA
BO04638.5prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 12:09:04
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG1934-PA | 1401 | ImpE2-RA | 1..907 | 17..923 | 4466 | 99.6 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-13 00:24:26
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| ImpE2-RA | 1708 | CG1934-RA | 80..986 | 17..923 | 4494 | 99.7 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2015-02-13 00:24:19
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3L | 28110227 | 3L | 3511696..3512602 | 923..17 | 4494 | 99.7 | Minus |
Blast to na_te.dros performed 2015-02-13 00:24:22
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Dmer\R1A3 | 3772 | Dmer\R1A3 MERCR1A3 3772bp | 628..712 | 721..805 | 137 | 62.4 | Plus |
BO04638.5prime Sim4 Records
Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 02:07:30 Download gff for
BO04638.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| ImpE2-PA | 1..906 | 17..922 | 99 | | Plus |
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 00:22:33 Download gff for
BO04638.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG1934-PA | 1..906 | 17..922 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-31 20:32:00 Download gff for
BO04638.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| ImpE2-RA | 72..985 | 8..922 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-13 02:43:15 Download gff for
BO04638.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| ImpE2-RA | 72..985 | 8..922 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-13 02:43:15 Download gff for
BO04638.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3L | 3511697..3512610 | 8..922 | 99 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-31 20:32:00 Download gff for
BO04638.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3L | 3511697..3512610 | 8..922 | 99 | | Minus |
BO04638.complete Sequence
1432 bp (1432 high quality bases) assembled on 2005-09-08
GenBank Submission: FJ629821
> BO04638.complete
GAAGTTATCAGTCGACATGAAGCCCGTTGCCTTGATCCTGGTTTTCCTGG
CCATTAGCCAAGCCAGAGTACTCAACTTGCCCAAGGAGGCGATCGATATT
CCTGTGGCCATTGTCGAGGATAAGGAGCCACCAGTAGCTTTGTCTTTGGT
CAAAGAGGAAGTTAAGGCAGAGGAAGTTAAGCCAGAGGAAGTGAAACCAA
TTGCTCAAGAAGAGAAAGCCAAGGATCTCAAGGAGGAAGTTAAGCCAGAA
ATTAAGCCTGAAATCAAAGAGCAGCCTAAGCCTGATATAAAAGACGAGAT
TAAGGAAGATTTAAAGGCAGACATTAAGGAGGAGCTCAAGGAGAAGATTG
AAGAGCAGATCAACGAGTTGCCTAATGCTAAGCCCCTGGAGCTGAAGGAA
AAATCCCTGGAAGCTGAGGAGAAACCTCAGGAAATCAAAGAAGAAGTTCA
GCAGCCAGAAATCAAAAAAGAGGCCACTGAAATCAAAGAGGAACCTGCTC
AGAACATTCTGAAATCTCTGCCAGCTGAAGAGACTGTCGTTGTGCCTGCC
GAGGAACTTTCCCCGAATCCGGTGGAGCAAGAGCAGTCGGAAAACCAGGA
CGCCGCGCATCCTCAGGTCCGTCAAGCCACCCAAGCCACGCCCACCCAGC
AGAGCACCACCCAGGGCAACTTTGTCCAGCAGTTGATCCAGAACTCGCCA
ATTGGTCAGTTCCTCAATCAGTTCCAGCCCCAGCCAGCTGCTGCTGCCGC
TCCAGCAGCAGCACAAGTCCAGGCGGATGATGCCGCCGCTGCGGCACCTG
CAACTCCGGCTCCCACGGTGCCCGGTTTCCTGAATCCCCAGGCCGCCATC
ACCTCCGCCCAACAGGCCGTGCAAAATGCGGCCCAAAGTGCCGTCAATGC
CACCACCCAGGCCTTCCAGGGCATCCAACAGTTTGCCAGCAACCTGGGCA
ATCAGTTCCAGAACACCCTGTCCAGCTTGACTGGCCAGCAGCAGCAGGCG
GTGTCCACCACTCCGCGTCCACCAGGTCCCATCCAGCAGTTTGTCAACAA
TGTTTTCGGTGGCAATAACAATGCCACGGCTGCCGCACCGCCTGCCCAGC
AAAGTGGCAATCCTCTGCAGGGAATTATCAACTTCCTGGGCGGCAATCGT
CCACAGAACGCACCAGCTGCCGCACCAGCCACTCAGGCCACAGAGAAGCC
AGCCGTAGATGACAAAATCGATCCTGCCAATGATGAGGTGGGTGAATTCG
TTCCGGAATCCGATAATGAGCTGCGTGCGAGTGGCGAAAATATTGATGAT
TCCTTCGAGGATGCTGGCGTACCGTCCAACGAGGTTATTGTGGTCAACGA
CGATGCCGGCGAGGAGGGAAATGCTGTCCAGAATCATCCAGTGGCCACCG
ATGCAGTGGCTCTCGCAAGCTTTCTAGACCAT
BO04638.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-27 08:24:56
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| ImpE2-RA | 1401 | CG1934-PA | 1..1398 | 17..1414 | 6990 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 08:24:57
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| ImpE2-RA | 1708 | CG1934-RA | 80..1477 | 17..1414 | 6990 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 08:24:54
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3L | 28110227 | 3L | 3511205..3512602 | 1414..17 | 6990 | 100 | Minus |
Blast to na_te.dros performed 2014-11-27 08:24:55
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Dmer\R1A3 | 3772 | Dmer\R1A3 MERCR1A3 3772bp | 628..712 | 721..805 | 137 | 62.4 | Plus |
BO04638.complete Sim4 Records
Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-21 22:40:01 Download gff for
BO04638.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| ImpE2-RA | 1..1401 | 17..1418 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-11 07:09:00 Download gff for
BO04638.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| ImpE2-RA | 68..1476 | 8..1418 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 09:58:32 Download gff for
BO04638.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| ImpE2-RA | 80..1477 | 17..1416 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 22:40:01 Download gff for
BO04638.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| ImpE2-RA | 68..1476 | 8..1418 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 09:18:07 Download gff for
BO04638.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| ImpE2-RA | 80..1477 | 17..1416 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 09:18:07 Download gff for
BO04638.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3L | 3511203..3512602 | 17..1416 | 99 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 09:58:32 Download gff for
BO04638.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3L | 3511203..3512602 | 17..1416 | 99 | | Minus |
BO04638.pep Sequence
Translation from 16 to 1432
> BO04638.pep
MKPVALILVFLAISQARVLNLPKEAIDIPVAIVEDKEPPVALSLVKEEVK
AEEVKPEEVKPIAQEEKAKDLKEEVKPEIKPEIKEQPKPDIKDEIKEDLK
ADIKEELKEKIEEQINELPNAKPLELKEKSLEAEEKPQEIKEEVQQPEIK
KEATEIKEEPAQNILKSLPAEETVVVPAEELSPNPVEQEQSENQDAAHPQ
VRQATQATPTQQSTTQGNFVQQLIQNSPIGQFLNQFQPQPAAAAAPAAAQ
VQADDAAAAAPATPAPTVPGFLNPQAAITSAQQAVQNAAQSAVNATTQAF
QGIQQFASNLGNQFQNTLSSLTGQQQQAVSTTPRPPGPIQQFVNNVFGGN
NNATAAAPPAQQSGNPLQGIINFLGGNRPQNAPAAAPATQATEKPAVDDK
IDPANDEVGEFVPESDNELRASGENIDDSFEDAGVPSNEVIVVNDDAGEE
GNAVQNHPVATDAVALASFLDH
BO04638.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 18:35:18
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| ImpE2-PA | 466 | CG1934-PA | 1..466 | 1..466 | 2336 | 100 | Plus |
| sls-PY | 10625 | CG1915-PY | 8317..8499 | 18..190 | 171 | 29.9 | Plus |
| sls-PZ | 15155 | CG1915-PZ | 13170..13352 | 18..190 | 171 | 29.9 | Plus |
| sls-PW | 15478 | CG1915-PW | 13170..13352 | 18..190 | 171 | 29.9 | Plus |
| sls-PS | 15481 | CG1915-PS | 13173..13355 | 18..190 | 171 | 29.9 | Plus |
