Clone BO04651 Report

Search the DGRC for BO04651

Clone and Library Details

Library:BO
Tissue Source:D. melanogaster
Created by:Joe Carlson
Date Registered:2004-06-03
Comments:Infusion clones with open reading frames
Original Plate Number:46
Well:51
Vector:pDNR-Dual
Associated Gene/TranscriptCG4004-RB
Protein status:BO04651.pep: validated full length
Sequenced Size:1051

Clone Sequence Records

BO04651.3prime Sequence

955 bp (816 high quality bases) assembled on 2005-12-01

> BO04651.3prime
ATGGTCTAGAAAGCTTGCTTTATGACCCATACTAAATTGGGTCTCGAACG
AAAGGCGATTCATTCGGCCGTAGACCAACACCTCGCTAATGATCCGTTCG
GCGAAAAGTCGCTGATCCGGACGCATACGCCGGAAGTGGCTGGCCATCCG
TTTTCCGATCAGCTCGCACTCGTACTCGCTGTCGCTTTCATGCTTTCTGT
CTCGCTCCCTATCCCGCTCTCTATGCCAGTCTCTATCTCTATTCGAAGTC
TCCACATTTCTACGCTTTCTCGCCGCTTCAACGTAATCGGTGTCATTGCT
ACTGCGTCTTCGTCGGTTACGGATGCGACGTCCGGATTTATCCGAAGTCT
GCGATTCACCGTTATGCTGCTGGTGCGAAGATACGGTGTGCTGCTGATAG
CCATTGTTCTTAATGCTCCCAGCCGATGAATTGTTACGATAATCATCAAC
ATGATCATCCATGTTATCCAATTCGGGATCGTTATCAGGCTCGGGTTCCG
GTTCAACATCGCCATCACCCACGGCATCAAGACGTAGCATATCCTCTTCG
TGTGGAAAGGCATCAGACATAATGTCAACATCTTCGGTCTCCAATTGCTG
CATATCCTCGGTTATATTCTCATCAACTTCAATTTCTCGCTTCACAATAA
AGCTCATTGATACCTCCTGTTCCGCCAATTGCGCTCCGAATGTTATCGTT
TTATTTGACTCATTCTGCAGGACTTTCGAATTTCGAACCAAATCCCGATC
GGCGGCCACTATGCCCTCCAATTGCAGTTCACCGGTTTCCAGTTCATAGA
GAAAGTCTAGTTCTTTGAAATACCCAAGCGTTGGCTTATATGTGTTCCCA
CTATCCAGCACCTTTCGCAATTCCCGGCGATACGAGGTCCGAAAATTGTT
GATCTTACGTTTGAGCGTATGGATATGGGCATAGCTATCGGTCGTGCGTA
GCAGC

BO04651.3prime Blast Records

Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 12:09:17
Subject Length Description Subject Range Query Range Score Percent Strand
CG4004-PB 1020 CG4004-RB 81..1017 955..19 4635 99.7 Minus
CG4004-PA 960 CG4004-RA 394..957 582..19 2820 100 Minus
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-13 05:38:19
Subject Length Description Subject Range Query Range Score Percent Strand
CG4004-RB 1395 CG4004-RB 138..1074 955..19 4655 99.8 Minus
CG4004-RC 1288 CG4004-RC 404..967 582..19 2820 100 Minus
CG4004-RE 2237 CG4004-RE 739..1302 582..19 2820 100 Minus
Blast to na_all.dmel.RELEASE6 performed 2015-02-13 05:38:17
Subject Length Description Subject Range Query Range Score Percent Strand
X 23542271 X 12746869..12747432 582..19 2820 100 Minus
X 23542271 X 12745495..12745868 955..582 1840 99.5 Minus
Blast to na_te.dros performed on 2015-02-13 05:38:18 has no hits.

BO04651.3prime Sim4 Records

Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 02:07:44 Download gff for BO04651.3prime
Subject Subject Range Query Range Percent Splice Strand
CG4004-PB 81..1020 15..955 99   Minus
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 00:22:56 Download gff for BO04651.3prime
Subject Subject Range Query Range Percent Splice Strand
CG4004-PB 81..1020 15..955 99   Minus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-09-01 17:54:49 Download gff for BO04651.3prime
Subject Subject Range Query Range Percent Splice Strand
CG4004-RB 138..1078 14..955 99   Minus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-13 07:53:33 Download gff for BO04651.3prime
Subject Subject Range Query Range Percent Splice Strand
CG4004-RB 138..1078 14..955 99   Minus
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-13 07:53:33 Download gff for BO04651.3prime
Subject Subject Range Query Range Percent Splice Strand
X 12745495..12745867 583..955 99 -> Minus
X 12746869..12747436 14..582 99   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-09-01 17:54:49 Download gff for BO04651.3prime
Subject Subject Range Query Range Percent Splice Strand
arm_X 12639528..12639900 583..955 99 -> Minus
arm_X 12640902..12641469 14..582 99   Minus

BO04651.5prime Sequence

909 bp (852 high quality bases) assembled on 2005-11-29

> BO04651.5prime
GAAGTTATCAGTCGACATGCCCGAATTGTGGCTGGTGCGCAGTAAACTGT
ATCGCGATCGCCAGCTGAAGCTCGAATCCTATAGCCGATTATTAGAGCTG
CTACGCACGACCGATAGCTATGCCAATATCCATACGCTCAAACGTAAGAT
CAACAATTTTCGGACCTCGTATCGCCGGGAATTGCGAAAGGTGCTGGATA
GTGGGAACACATATAAGCCAACGCTTTGGTATTTCAAAGAACTAGACTTT
CTCTATGAACTGGAAACCGGTGAACTGCAATTGGAGGGCATAGTGGCCGC
CGATCGGGATTTGGTTCGAAATTCGAAAGTCCTGCAGAATGAGTCAAATA
AAACGATAACATTCGGAGCGCAATTGGCGGAACAGGAGGTATCAATGAGC
TTTATTGTGAAGCGAGAAATTGAAGTTGATGAGAATATAACCGAGGATAT
GCAGCAATTGGAGACCGAAGATGTTGACATTATGTCTGATGCCTTTCCAC
ACGAAGAGGATATGCTACGTCTTGATGCCGTGGGTGATGGCGATGTTGAA
CCGGAACCCGAGCCTGATAACGATCCCGAATTGGATAACATGGATGATCA
TGTTGATGATTATCGTAACAATTCATCGGCTGGGAGCATTAAGAACAATG
GCTATCAGCAGCACACCGTATCTTCGCACCAGCAGCATAACGGTGAATCG
CAGACTTCGGATAAATCCGGACGTCGCATCCGTAACCGACGAAGACGCAG
TAGCAATGACACCGATTACGTTGAAGCGGCGAGAAAGCGTAGAAATGTGG
AGACTTCGAATAGAGATAGAGACTGGCATAGAGAGCGGGATAGGGAGCGA
GACAGAAAGCATGGAAGCGACAGCGAGTACGAGTGCGAGCTGATCGGAAA
ACGGATGGG

BO04651.5prime Blast Records

Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 12:09:18
Subject Length Description Subject Range Query Range Score Percent Strand
CG4004-PB 1020 CG4004-RB 1..892 17..908 4435 99.8 Plus
CG4004-PA 960 CG4004-RA 394..832 470..908 2170 99.7 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-04 19:27:29
Subject Length Description Subject Range Query Range Score Percent Strand
CG4004-RB 1395 CG4004-RB 58..949 17..908 4445 99.9 Plus
CG4004-RC 1288 CG4004-RC 404..842 470..908 2180 99.8 Plus
CG4004-RE 2237 CG4004-RE 739..1177 470..908 2180 99.8 Plus
Blast to na_all.dmel.RELEASE6 performed 2015-02-04 19:27:23
Subject Length Description Subject Range Query Range Score Percent Strand
X 23542271 X 12745415..12745868 17..470 2270 100 Plus
X 23542271 X 12746869..12747307 470..908 2180 99.8 Plus
Blast to na_te.dros performed on 2015-02-04 19:27:26 has no hits.

BO04651.5prime Sim4 Records

Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 02:07:45 Download gff for BO04651.5prime
Subject Subject Range Query Range Percent Splice Strand
CG4004-PB 1..892 17..909 99   Plus
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 00:22:58 Download gff for BO04651.5prime
Subject Subject Range Query Range Percent Splice Strand
CG4004-PB 1..892 17..909 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-10 21:17:23 Download gff for BO04651.5prime
Subject Subject Range Query Range Percent Splice Strand
CG4004-RB 55..949 12..909 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-04 21:33:35 Download gff for BO04651.5prime
Subject Subject Range Query Range Percent Splice Strand
CG4004-RB 55..949 12..909 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-04 21:33:35 Download gff for BO04651.5prime
Subject Subject Range Query Range Percent Splice Strand
X 12745412..12745867 12..469 99 -> Plus
X 12746869..12747307 470..909 99   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-10 21:17:23 Download gff for BO04651.5prime
Subject Subject Range Query Range Percent Splice Strand
arm_X 12639445..12639900 12..469 99 -> Plus
arm_X 12640902..12641340 470..909 99   Plus

BO04651.complete Sequence

1051 bp (1051 high quality bases) assembled on 2005-09-08

GenBank Submission: FJ629828

> BO04651.complete
GAAGTTATCAGTCGACATGCCCGAATTGTGGCTGGTGCGCAGTAAACTGT
ATCGCGATCGCCAGCTGAAGCTCGAATCCTATAGCCGATTATTAGAGCTG
CTACGCACGACCGATAGCTATGCCAATATCCATACGCTCAAACGTAAGAT
CAACAATTTTCGGACCTCGTATCGCCGGGAATTGCGAAAGGTGCTGGATA
GTGGGAACACATATAAGCCAACGCTTTGGTATTTCAAAGAACTAGACTTT
CTCTATGAACTGGAAACCGGTGAACTGCAATTGGAGGGCATAGTGGCCGC
CGATCGGGATTTGGTTCGAAATTCGAAAGTCCTGCAGAATGAGTCAAATA
AAACGATAACATTCGGAGCGCAATTGGCGGAACAGGAGGTATCAATGAGC
TTTATTGTGAAGCGAGAAATTGAAGTTGATGAGAATATAACCGAGGATAT
GCAGCAATTGGAGACCGAAGATGTTGACATTATGTCTGATGCCTTTCCAC
ACGAAGAGGATATGCTACGTCTTGATGCCGTGGGTGATGGCGATGTTGAA
CCGGAACCCGAGCCTGATAACGATCCCGAATTGGATAACATGGATGATCA
TGTTGATGATTATCGTAACAATTCATCGGCTGGGAGCATTAAGAACAATG
GCTATCAGCAGCACACCGTATCTTCGCACCAGCAGCATAACGGTGAATCG
CAGACTTCGGATAAATCCGGACGTCGCATCCGTAACCGACGAAGACGCAG
TAGCAATGACACCGATTACGTTGAAGCGGCGAGAAAGCGTAGAAATGTGG
AGACTTCGAATAGAGATAGAGACTGGCATAGAGAGCGGGATAGGGAGCGA
GACAGAAAGCATGAAAGCGACAGCGAGTACGAGTGCGAGCTGATCGGAAA
ACGGATGGCCAGCCACTTCCGGCGTATGCGTCCGGATCAGCGACTTTTCG
CCGAACGGATCATTAGCGAGGTGTTGGTCTACGGCCGAATGAATCGCCTT
TCGTTCGAGACCCAATTTAGTATGGGTCATAAAGCAAGCTTTCTAGACCA
T

BO04651.complete Blast Records

Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-27 19:58:38
Subject Length Description Subject Range Query Range Score Percent Strand
CG4004-RB 1020 CG4004-PB 1..1017 17..1033 5085 100 Plus
CG4004-RC 915 CG4004-PC 349..912 470..1033 2820 100 Plus
CG4004-RE 960 CG4004-PE 394..957 470..1033 2820 100 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 19:58:40
Subject Length Description Subject Range Query Range Score Percent Strand
CG4004-RB 1395 CG4004-RB 58..1074 17..1033 5085 100 Plus
CG4004-RC 1288 CG4004-RC 404..967 470..1033 2820 100 Plus
CG4004-RE 2237 CG4004-RE 739..1302 470..1033 2820 100 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 19:58:36
Subject Length Description Subject Range Query Range Score Percent Strand
X 23542271 X 12746869..12747432 470..1033 2820 100 Plus
X 23542271 X 12745415..12745868 17..470 2270 100 Plus
Blast to na_te.dros performed on 2014-11-27 19:58:37 has no hits.

BO04651.complete Sim4 Records

Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-21 22:39:53 Download gff for BO04651.complete
Subject Subject Range Query Range Percent Splice Strand
CG4004-RB 1..1020 17..1037 99   Plus
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-11 07:08:50 Download gff for BO04651.complete
Subject Subject Range Query Range Percent Splice Strand
CG4004-RB 55..1078 12..1038 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 19:01:36 Download gff for BO04651.complete
Subject Subject Range Query Range Percent Splice Strand
CG4004-RB 58..1074 17..1035 99   Plus
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 22:39:53 Download gff for BO04651.complete
Subject Subject Range Query Range Percent Splice Strand
CG4004-RB 55..1078 12..1038 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 21:11:52 Download gff for BO04651.complete
Subject Subject Range Query Range Percent Splice Strand
CG4004-RB 58..1074 17..1035 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 21:11:52 Download gff for BO04651.complete
Subject Subject Range Query Range Percent Splice Strand
X 12745415..12745867 17..469 100 -> Plus
X 12746869..12747432 470..1035 99   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 19:01:36 Download gff for BO04651.complete
Subject Subject Range Query Range Percent Splice Strand
arm_X 12639448..12639900 17..469 100 -> Plus
arm_X 12640902..12641465 470..1035 99   Plus

BO04651.pep Sequence

Translation from 16 to 1051

> BO04651.pep
MPELWLVRSKLYRDRQLKLESYSRLLELLRTTDSYANIHTLKRKINNFRT
SYRRELRKVLDSGNTYKPTLWYFKELDFLYELETGELQLEGIVAADRDLV
RNSKVLQNESNKTITFGAQLAEQEVSMSFIVKREIEVDENITEDMQQLET
EDVDIMSDAFPHEEDMLRLDAVGDGDVEPEPEPDNDPELDNMDDHVDDYR
NNSSAGSIKNNGYQQHTVSSHQQHNGESQTSDKSGRRIRNRRRRSSNDTD
YVEAARKRRNVETSNRDRDWHRERDRERDRKHESDSEYECELIGKRMASH
FRRMRPDQRLFAERIISEVLVYGRMNRLSFETQFSMGHKASFLDH

BO04651.pep Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 18:35:28
Subject Length Description Subject Range Query Range Score Percent Strand
CG4004-PB 339 CG4004-PB 1..339 1..339 1762 100 Plus
CG4004-PE 319 CG4004-PE 29..319 4..339 1123 67.6 Plus
CG4004-PD 319 CG4004-PD 29..319 4..339 1123 67.6 Plus
CG4004-PA 319 CG4004-PA 29..319 4..339 1123 67.6 Plus
CG4004-PC 304 CG4004-PC 113..304 148..339 1002 98.4 Plus