Clone Sequence Records
BO04681.5prime Sequence
524 bp (523 high quality bases) assembled on 2005-11-29
> BO04681.5prime
GAAGTTATCAGTCGACATGTCGTTGCCACGCGTTTACTTCGATATAGCCG
CAGGAGGTGAGAAGTTAGGTAGAATTGTGATGGAACTACGTTCGGATGTG
GTGCCCAAGACGGCGGAGAATTTCCGGGCCCTCTGCACCGGAGAGAAGGG
GTACGGCTACAAGGGATCACCATTCCACCGCGTCATCCCGAATTTCATGT
GTCAGGGCGGTGATTTCACTAATCAAAACGGAACTGGAGGACGCTCCATT
TATGGAAACAAGTTTCCCGATGAGAATTTCGAGCTAAAGCATACCGGAGC
TGGTGTACTTTCGATGGCCAATGCTGGGGCCAATACCAATGGATCTCAGT
TTTTCATTTGCACCGGGAAAACCACATGGCTGGATAATAAGCATGTCGTG
TTCGGCAAGGTCGTTGAGGGAATGGATATCGTCCAGAAGGTAGAATCTTA
CGGTTCACAAGATGGGAAGACCAGCAAGAAAGTAATTATCGAAGACTGCG
GAGCCCTCGCAAGCTTTCTAGACC
BO04681.5prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 12:09:43
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG7768-PB | 495 | CG7768-RB | 1..492 | 17..508 | 2460 | 100 | Plus |
CG7768-PA | 495 | CG7768-RA | 1..492 | 17..508 | 2460 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-13 01:00:59
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG7768-RB | 679 | CG7768-RB | 88..579 | 17..508 | 2460 | 100 | Plus |
CG7768-RA | 717 | CG7768-RA | 126..617 | 17..508 | 2460 | 100 | Plus |
Cyp1-RA | 1227 | CG9916-RA | 287..687 | 80..480 | 745 | 79.4 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2015-02-13 01:00:52
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
3L | 28110227 | 3L | 14218383..14218874 | 17..508 | 2460 | 100 | Plus |
X | 23542271 | X | 16318213..16318598 | 480..95 | 730 | 79.3 | Minus |
Blast to na_te.dros performed on 2015-02-13 01:00:55 has no hits.
BO04681.5prime Sim4 Records
Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 02:08:15 Download gff for
BO04681.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG7768-PB | 1..495 | 17..511 | 99 | | Plus |
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 00:23:43 Download gff for
BO04681.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG7768-PA | 1..495 | 17..511 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-31 20:07:13 Download gff for
BO04681.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG7768-RA | 115..621 | 7..513 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-13 03:05:54 Download gff for
BO04681.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG7768-RA | 116..622 | 7..513 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-13 03:05:54 Download gff for
BO04681.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
3L | 14218373..14218879 | 7..513 | 98 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-31 20:07:13 Download gff for
BO04681.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_3L | 14211473..14211979 | 7..513 | 98 | | Plus |
BO04681.3prime Sequence
524 bp (523 high quality bases) assembled on 2005-12-01
> BO04681.3prime
ATGGTCTAGAAAGCTTGCGAGGGCTCCGCAGTCTTCGATAATTACTTTCT
TGCTGGTCTTCCCATCTTGTGAACCGTAAGATTCTACCTTCTGGACGATA
TCCATTCCCTCAACGACCTTGCCGAACACGACATGCTTATTATCCAGCCA
TGTGGTTTTCCCGGTGCAAATGAAAAACTGAGATCCATTGGTATTGGCCC
CAGCATTGGCCATCGAAAGTACACCAGCTCCGGTATGCTTTAGCTCGAAA
TTCTCATCGGGAAACTTGTTTCCATAAATGGAGCGTCCTCCAGTTCCGTT
TTGATTAGTGAAATCACCGCCCTGACACATGAAATTCGGGATGACGCGGT
GGAATGGTGATCCCTTGTAGCCGTACCCCTTCTCTCCGGTGCAGAGGGCC
CGGAAATTCTCCGCCGTCTTGGGCACCACATCCGAACGTAGTTCCATCAC
AATTCTACCTAACTTCTCACCTCCTGCGGCTATATCGAAGTAAACGCGTG
GCAACGACATGTCGACTGATAACT
BO04681.3prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 12:09:42
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG7768-PB | 495 | CG7768-RB | 1..492 | 510..19 | 2460 | 100 | Minus |
CG7768-PA | 495 | CG7768-RA | 1..492 | 510..19 | 2460 | 100 | Minus |
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-12 01:10:56
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG7768-RB | 679 | CG7768-RB | 88..579 | 510..19 | 2460 | 100 | Minus |
CG7768-RA | 717 | CG7768-RA | 126..617 | 510..19 | 2460 | 100 | Minus |
Cyp1-RA | 1227 | CG9916-RA | 287..687 | 447..47 | 745 | 79.4 | Minus |
Blast to na_all.dmel.RELEASE6 performed 2015-02-12 01:10:51
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
3L | 28110227 | 3L | 14218383..14218874 | 510..19 | 2460 | 100 | Minus |
X | 23542271 | X | 16318213..16318598 | 47..432 | 730 | 79.3 | Plus |
Blast to na_te.dros performed on 2015-02-12 01:10:54 has no hits.
BO04681.3prime Sim4 Records
Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 02:08:14 Download gff for
BO04681.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG7768-PB | 1..495 | 16..510 | 99 | | Minus |
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 00:23:42 Download gff for
BO04681.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG7768-PA | 1..495 | 16..510 | 99 | | Minus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-28 11:39:03 Download gff for
BO04681.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG7768-RA | 115..621 | 14..520 | 98 | | Minus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-12 05:11:18 Download gff for
BO04681.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG7768-RA | 116..622 | 14..520 | 98 | | Minus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-12 05:11:18 Download gff for
BO04681.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
3L | 14218373..14218879 | 14..520 | 98 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-28 11:39:03 Download gff for
BO04681.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_3L | 14211473..14211979 | 14..520 | 98 | | Minus |
BO04681.complete Sequence
526 bp (526 high quality bases) assembled on 2005-10-17
GenBank Submission: FJ638625
> BO04681.complete
GAAGTTATCAGTCGACATGTCGTTGCCACGCGTTTACTTCGATATAGCCG
CAGGAGGTGAGAAGTTAGGTAGAATTGTGATGGAACTACGTTCGGATGTG
GTGCCCAAGACGGCGGAGAATTTCCGGGCCCTCTGCACCGGAGAGAAGGG
GTACGGCTACAAGGGATCACCATTCCACCGCGTCATCCCGAATTTCATGT
GTCAGGGCGGTGATTTCACTAATCAAAACGGAACTGGAGGACGCTCCATT
TATGGAAACAAGTTTCCCGATGAGAATTTCGAGCTAAAGCATACCGGAGC
TGGTGTACTTTCGATGGCCAATGCTGGGGCCAATACCAATGGATCTCAGT
TTTTCATTTGCACCGGGAAAACCACATGGCTGGATAATAAGCATGTCGTG
TTCGGCAAGGTCGTTGAGGGAATGGATATCGTCCAGAAGGTAGAATCTTA
CGGTTCACAAGATGGGAAGACCAGCAAGAAAGTAATTATCGAAGACTGCG
GAGCCCTCGCAAGCTTTCTAGACCAT
BO04681.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 00:09:03
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG7768-RB | 495 | CG7768-PB | 1..492 | 17..508 | 2460 | 100 | Plus |
CG7768-RA | 495 | CG7768-PA | 1..492 | 17..508 | 2460 | 100 | Plus |
Cyp1-RA | 684 | CG9916-PA | 253..653 | 80..480 | 745 | 79.1 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 00:09:04
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG7768-RB | 679 | CG7768-RB | 88..579 | 17..508 | 2460 | 100 | Plus |
CG7768-RA | 717 | CG7768-RA | 126..617 | 17..508 | 2460 | 100 | Plus |
Cyp1-RA | 1227 | CG9916-RA | 287..687 | 80..480 | 745 | 79.1 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 00:09:01
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
3L | 28110227 | 3L | 14218383..14218874 | 17..508 | 2460 | 100 | Plus |
X | 23542271 | X | 16318213..16318598 | 480..95 | 730 | 79.3 | Minus |
Blast to na_te.dros performed on 2014-11-28 00:09:02 has no hits.
BO04681.complete Sim4 Records
Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-21 22:31:19 Download gff for
BO04681.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG7768-RA | 1..495 | 17..511 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-11 02:05:29 Download gff for
BO04681.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG7768-RB | 465..971 | 7..513 | 98 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 20:18:47 Download gff for
BO04681.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG7768-RA | 125..616 | 17..510 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 22:31:19 Download gff for
BO04681.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG7768-RB | 465..971 | 7..513 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 01:27:05 Download gff for
BO04681.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG7768-RA | 126..617 | 17..510 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 01:27:05 Download gff for
BO04681.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
3L | 14218383..14218874 | 17..510 | 99 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 20:18:47 Download gff for
BO04681.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_3L | 14211483..14211974 | 17..510 | 99 | | Plus |
BO04681.pep Sequence
Translation from 16 to 526
> BO04681.pep
MSLPRVYFDIAAGGEKLGRIVMELRSDVVPKTAENFRALCTGEKGYGYKG
SPFHRVIPNFMCQGGDFTNQNGTGGRSIYGNKFPDENFELKHTGAGVLSM
ANAGANTNGSQFFICTGKTTWLDNKHVVFGKVVEGMDIVQKVESYGSQDG
KTSKKVIIEDCGALASFLDH
BO04681.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 19:36:54
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG7768-PB | 164 | CG7768-PB | 1..164 | 1..164 | 875 | 100 | Plus |
CG7768-PA | 164 | CG7768-PA | 1..164 | 1..164 | 875 | 100 | Plus |
Cyp1-PA | 227 | CG9916-PA | 65..227 | 2..164 | 752 | 83.4 | Plus |
cyp33-PA | 300 | CG4886-PA | 139..299 | 4..164 | 625 | 70.8 | Plus |
CG2852-PD | 205 | CG2852-PD | 30..190 | 5..164 | 480 | 57.1 | Plus |