Clone BO04721 Report

Search the DGRC for BO04721

Clone and Library Details

Library:BO
Tissue Source:D. melanogaster
Created by:Joe Carlson
Date Registered:2004-06-03
Comments:Infusion clones with open reading frames
Original Plate Number:47
Well:21
Vector:pDNR-Dual
Associated Gene/TranscriptCG32037-RA
Protein status:BO04721.pep: validated full length
Sequenced Size:790

Clone Sequence Records

BO04721.3prime Sequence

788 bp (787 high quality bases) assembled on 2005-12-01

> BO04721.3prime
ATGGTCTAGAAAGCTTGCATAATTCTTTCGTCCCGTTTGCTGCAGGTCCA
GTTTGTTCAGCAGATCGTCAAACTCGCTGAAGAGATGGGTTGTGCCATAG
CTGTCCACATAGGTCTTGCTGCCCCTGGAGGTTTTCTTGAAAGCGGGCAG
CACCGGACTGTGACCATGCAGAAGATTCACATTCTGATAAGACTGCGCCT
TGGCCGAACCGGCCAATGGATGCGACTGACTCTTGCCAACCGTGGGCGCC
AGTTCCAGAAAATTGGGCGCCTTCTTTGGCTGCAACTTGACCTGGTTGAG
CAGCGGATTGTGCAACTGAAGCTGCCGGTAGATGGGCAGGGCGTGCTTCG
GTGGCACCACCACGTGCTGGCGGCCCACCGCCTGCGGGTACAGGTACGTG
GTCTCCACCGTTGGCACCTGGCGGTAGTGGTATCGTCCCTCCCGCGGCGT
ATACCTCCCATCCGAGCTCAGGGCGATGTGGAAGACGGTGCGCATGGGCT
TGCTGTAGTACTGATACACCTGCGGATTCCGCTGCTCGGGAACTATCCCA
TCTGGCACTGCGATGCCCTCCTTCTGCAGGCGATTCAAAAACAATCGATC
CGTCTCAAAGGCGGTGTCGGGTATCTTACCACCCGCATGTGGCAATACTT
GTTCCCGATAGATTTGGCGTTTCTTGTGGTTGCGCTCAGCAAACTCCGAG
CCTTGGGCAATTATGAATGGGCCCACGCAAAGATATAGTANACCGATCAG
CAAGATCACATATGGCGTAGACATGTCGACTGATAACT

BO04721.3prime Blast Records

Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 12:10:14
Subject Length Description Subject Range Query Range Score Percent Strand
CG32037-PA 759 CG32037-RA 1..756 774..19 3761 99.8 Minus
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-11 15:37:49
Subject Length Description Subject Range Query Range Score Percent Strand
CG32037-RB 1836 CG32037-RB 417..1172 774..19 3769 99.9 Minus
CG32037-RA 1540 CG32037-RA 417..1172 774..19 3769 99.9 Minus
Blast to na_all.dmel.RELEASE6 performed 2015-02-11 15:37:45
Subject Length Description Subject Range Query Range Score Percent Strand
3L 28110227 3L 9490566..9490818 270..522 1265 100 Plus
3L 28110227 3L 9490323..9490508 85..270 930 100 Plus
3L 28110227 3L 9491472..9491630 518..676 795 100 Plus
3L 28110227 3L 9491698..9491799 673..774 499 99 Plus
3L 28110227 3L 9490166..9490231 19..84 330 100 Plus
Blast to na_te.dros performed on 2015-02-11 15:37:47 has no hits.

BO04721.3prime Sim4 Records

Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 02:08:52 Download gff for BO04721.3prime
Subject Subject Range Query Range Percent Splice Strand
CG32037-PA 1..759 18..774 99   Minus
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 00:24:36 Download gff for BO04721.3prime
Subject Subject Range Query Range Percent Splice Strand
CG32037-PA 1..759 18..774 99   Minus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-25 19:34:11 Download gff for BO04721.3prime
Subject Subject Range Query Range Percent Splice Strand
CG32037-RA 408..1178 10..782 98   Minus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-11 18:30:29 Download gff for BO04721.3prime
Subject Subject Range Query Range Percent Splice Strand
CG32037-RA 408..1178 10..782 98   Minus
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-11 18:30:29 Download gff for BO04721.3prime
Subject Subject Range Query Range Percent Splice Strand
3L 9490566..9490815 270..519 100 <- Plus
3L 9491474..9491626 520..672 100 <- Plus
3L 9491698..9491808 673..782 96   Plus
3L 9490159..9490231 10..84 94 <- Plus
3L 9490323..9490507 85..269 100 <- Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-25 19:34:11 Download gff for BO04721.3prime
Subject Subject Range Query Range Percent Splice Strand
arm_3L 9483259..9483331 10..84 94 <- Plus
arm_3L 9483423..9483607 85..269 100 <- Plus
arm_3L 9483666..9483915 270..519 100 <- Plus
arm_3L 9484574..9484726 520..672 100 <- Plus
arm_3L 9484798..9484908 673..782 96   Plus

BO04721.5prime Sequence

788 bp (750 high quality bases) assembled on 2005-12-01

> BO04721.5prime
GAAGTTATCAGTCGACATGTCTACGCCATATGTGATCTTGCTGATCGGTT
TACTATATCTTTGCGTGGGCCCATTCATAATTGCCCAAGGCTCGGAGTTT
GCTGAGCGCAACCACAAGAAACGCCAAATCTATCGGGAACAAGTATTGCC
ACATGCGGGTGGTAAGATACCCGACACCGCCTTTGAGACGGATCGATTGT
TTTTGAATCGCCTGCAGAAGGAGGGCATCGCAGTGCCAGATGGGATAGTT
CCCGAGCAGCGGAATCCGCAGGTGTATCAGTACTACAGCAAGCCCATGCG
CACCGTCTTCCACATCGCCCTGAGCTCGGATGGGAGGTATACGCCGCGGG
AGGGACGATACCACTACCGCCAGGTGCCAACGGTGGAGACCACGTACCTG
TACCCGCAGGCGGTGGGCCGCCAGCACGTGGTGGTGCCACCGAAGCACGC
CCTGCCCATCTACCGGCAGCTTCAGTTGCACAATCCGCTGCTCAACCAGG
TCAAGTTGCAGCCAAAGAAGGCGCCCAATTTTCTGGAACTGGCGCCCACG
GTTGGCAAGAGTCAGTCGCATCCATTGGCCGGTTCGGCCAAGGCGCAGTC
TTATCAGAATGTGAATCTTCTGCATGGTCACAGTCCGGTGCTGCCCGCTT
TCAAGAAAACCTCCAGGGGCAGCAAGACCTATGTGGACAGCTATGGCACA
ACCCATCTCTTCAGCGAGTTTGACGATCTGCTGAACAAACTGGACCTGCA
GCAAACGGGACGAAAGAATTATGCAAGCTTTCTAGACC

BO04721.5prime Blast Records

Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 12:10:15
Subject Length Description Subject Range Query Range Score Percent Strand
CG32037-PA 759 CG32037-RA 1..756 17..772 3780 100 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-13 13:30:31
Subject Length Description Subject Range Query Range Score Percent Strand
CG32037-RB 1836 CG32037-RB 417..1172 17..772 3780 100 Plus
CG32037-RA 1540 CG32037-RA 417..1172 17..772 3780 100 Plus
Blast to na_all.dmel.RELEASE6 performed 2015-02-13 13:30:30
Subject Length Description Subject Range Query Range Score Percent Strand
3L 28110227 3L 9490566..9490818 521..269 1265 100 Minus
3L 28110227 3L 9490323..9490508 706..521 930 100 Minus
3L 28110227 3L 9491472..9491630 273..115 795 100 Minus
3L 28110227 3L 9491698..9491799 118..17 510 100 Minus
3L 28110227 3L 9490166..9490231 772..707 330 100 Minus
Blast to na_te.dros performed on 2015-02-13 13:30:31 has no hits.

BO04721.5prime Sim4 Records

Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 02:08:53 Download gff for BO04721.5prime
Subject Subject Range Query Range Percent Splice Strand
CG32037-PA 1..759 17..773 99   Plus
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 00:24:38 Download gff for BO04721.5prime
Subject Subject Range Query Range Percent Splice Strand
CG32037-PA 1..759 17..773 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-09-02 17:42:48 Download gff for BO04721.5prime
Subject Subject Range Query Range Percent Splice Strand
CG32037-RA 408..1178 9..781 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-13 15:42:43 Download gff for BO04721.5prime
Subject Subject Range Query Range Percent Splice Strand
CG32037-RA 408..1178 9..781 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-13 15:42:43 Download gff for BO04721.5prime
Subject Subject Range Query Range Percent Splice Strand
3L 9490159..9490231 707..781 94 <- Minus
3L 9490323..9490507 522..706 100 <- Minus
3L 9490566..9490815 272..521 100 <- Minus
3L 9491474..9491626 119..271 100 <- Minus
3L 9491698..9491808 9..118 97   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-09-02 17:42:48 Download gff for BO04721.5prime
Subject Subject Range Query Range Percent Splice Strand
arm_3L 9483259..9483331 707..781 94 <- Minus
arm_3L 9483423..9483607 522..706 100 <- Minus
arm_3L 9483666..9483915 272..521 100 <- Minus
arm_3L 9484574..9484726 119..271 100 <- Minus
arm_3L 9484798..9484908 9..118 97   Minus

BO04721.complete Sequence

790 bp (790 high quality bases) assembled on 2005-09-08

GenBank Submission: FJ629851

> BO04721.complete
GAAGTTATCAGTCGACATGTCTACGCCATATGTGATCTTGCTGATCGGTT
TACTATATCTTTGCGTGGGCCCATTCATAATTGCCCAAGGCTCGGAGTTT
GCTGAGCGCAACCACAAGAAACGCCAAATCTATCGGGAACAAGTATTGCC
ACATGCGGGTGGTAAGATACCCGACACCGCCTTTGAGACGGATCGATTGT
TTTTGAATCGCCTGCAGAAGGAGGGCATCGCAGTGCCAGATGGGATAGTT
CCCGAGCAGCGGAATCCGCAGGTGTATCAGTACTACAGCAAGCCCATGCG
CACCGTCTTCCACATCGCCCTGAGCTCGGATGGGAGGTATACGCCGCGGG
AGGGACGATACCACTACCGCCAGGTGCCAACGGTGGAGACCACGTACCTG
TACCCGCAGGCGGTGGGCCGCCAGCACGTGGTGGTGCCACCGAAGCACGC
CCTGCCCATCTACCGGCAGCTTCAGTTGCACAATCCGCTGCTCAACCAGG
TCAAGTTGCAGCCAAAGAAGGCGCCCAATTTTCTGGAACTGGCGCCCACG
GTTGGCAAGAGTCAGTCGCATCCATTGGCCGGTTCGGCCAAGGCGCAGTC
TTATCAGAATGTGAATCTTCTGCATGGTCACAGTCCGGTGCTGCCCGCTT
TCAAGAAAACCTCCAGGGGCAGCAAGACCTATGTGGACAGCTATGGCACA
ACCCATCTCTTCAGCGAGTTTGACGATCTGCTGAACAAACTGGACCTGCA
GCAAACGGGACGAAAGAATTATGCAAGCTTTCTAGACCAT

BO04721.complete Blast Records

Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-27 13:51:46
Subject Length Description Subject Range Query Range Score Percent Strand
CG32037-RB 759 CG32037-PB 1..756 17..772 3780 100 Plus
CG32037-RA 759 CG32037-PA 1..756 17..772 3780 100 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 13:51:47
Subject Length Description Subject Range Query Range Score Percent Strand
CG32037-RB 1836 CG32037-RB 417..1172 17..772 3780 100 Plus
CG32037-RA 1540 CG32037-RA 417..1172 17..772 3780 100 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 13:51:43
Subject Length Description Subject Range Query Range Score Percent Strand
3L 28110227 3L 9490566..9490818 521..269 1265 100 Minus
3L 28110227 3L 9490323..9490508 706..521 930 100 Minus
3L 28110227 3L 9491472..9491630 273..115 795 100 Minus
3L 28110227 3L 9491698..9491799 118..17 510 100 Minus
3L 28110227 3L 9490166..9490231 772..707 330 100 Minus
Blast to na_te.dros performed on 2014-11-27 13:51:45 has no hits.

BO04721.complete Sim4 Records

Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-21 22:39:36 Download gff for BO04721.complete
Subject Subject Range Query Range Percent Splice Strand
CG32037-RA 1..759 17..773 99   Plus
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-11 07:08:27 Download gff for BO04721.complete
Subject Subject Range Query Range Percent Splice Strand
CG32037-RA 387..1157 9..781 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 08:34:09 Download gff for BO04721.complete
Subject Subject Range Query Range Percent Splice Strand
CG32037-RA 417..1172 17..774 99   Plus
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 22:39:36 Download gff for BO04721.complete
Subject Subject Range Query Range Percent Splice Strand
CG32037-RA 387..1157 9..781 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 14:28:10 Download gff for BO04721.complete
Subject Subject Range Query Range Percent Splice Strand
CG32037-RA 417..1172 17..774 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 14:28:10 Download gff for BO04721.complete
Subject Subject Range Query Range Percent Splice Strand
3L 9490164..9490231 707..774 97 <- Minus
3L 9490323..9490507 522..706 100 <- Minus
3L 9490566..9490815 272..521 100 <- Minus
3L 9491474..9491626 119..271 100 <- Minus
3L 9491698..9491799 17..118 100   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 08:34:09 Download gff for BO04721.complete
Subject Subject Range Query Range Percent Splice Strand
arm_3L 9484574..9484726 119..271 100 <- Minus
arm_3L 9484798..9484899 17..118 100   Minus
arm_3L 9483264..9483331 707..774 97 <- Minus
arm_3L 9483423..9483607 522..706 100 <- Minus
arm_3L 9483666..9483915 272..521 100 <- Minus

BO04721.pep Sequence

Translation from 16 to 790

> BO04721.pep
MSTPYVILLIGLLYLCVGPFIIAQGSEFAERNHKKRQIYREQVLPHAGGK
IPDTAFETDRLFLNRLQKEGIAVPDGIVPEQRNPQVYQYYSKPMRTVFHI
ALSSDGRYTPREGRYHYRQVPTVETTYLYPQAVGRQHVVVPPKHALPIYR
QLQLHNPLLNQVKLQPKKAPNFLELAPTVGKSQSHPLAGSAKAQSYQNVN
LLHGHSPVLPAFKKTSRGSKTYVDSYGTTHLFSEFDDLLNKLDLQQTGRK
NYASFLDH

BO04721.pep Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 18:35:48
Subject Length Description Subject Range Query Range Score Percent Strand
CG32037-PB 252 CG32037-PB 1..252 1..252 1330 100 Plus
CG32037-PA 252 CG32037-PA 1..252 1..252 1330 100 Plus