Clone Sequence Records
BO04758.3prime Sequence
874 bp (839 high quality bases) assembled on 2005-12-01
> BO04758.3prime
ATGGTCTAGAAAGCTTGCGGAATTACTGAATTTCTCGTCGCTAGTCAGAA
CGTTGTATGCACAGCCGAGGGCCCAGGAGATTTCGTGGCCATCTATCTTC
TTGTAAAGCTTAATCTTCTTGCCATCGTTGAGGCCAAATCCTTCGCGCAG
CAGCGTCGAGATGAAGGTAAGGTCGAAGCACATGAAGGGCTGCTCATCGT
TGGGAATGGCACAGATCTCCTGGGCCTTCTTGCGATAAGCTTCCACCGTG
GTCTCGCCGCCAGCCAGTGGATCCACCAGACCCGACTCGATGGCCCGCTC
AAAGTAGTAGCTGAACGCGGCCACCGCGTGCTGCTTGAGTGTGAACGGCT
TGGGCTTGACCAGCGGCATTACCTTGCTCTTGACCAGCTCCAGGCAGGCA
TCGAAGTCCACAATGGGCTGCTCGGCACTGGACTTGCCATTCTCCTTGCC
GCTGACCTTGTACTGCACATTGCCGTATGTCCACGTGCGATTGGCGATTA
TGGGATTCACGCAGACGCTCTCCAGCACCGTATCCTCCTTCTTGTAGCCG
TGCGTGAAGACAGCATGGCGTGCAGCCATTAGACCCAGTCCCAGATAGCT
GTGCGTGAAGACGTTGATCTTCTTGCTGGACGTGACCACCTCGTGCATGT
ACTTATCGTACACGGGCACCTGGTCCGGATCCGTTGGCGAGAAGGTTACC
TGCGTGCTACCGCCGCCCAAGTCCAAGGCAGCTGCCTGGTTCGTCTTGGA
CAGGCGGCCCAGCAGGAAGTTCACGGTAAACCAGCTGAAGATGCCCTCGT
CCGTGCCGTCCATGATCTCCACGGCATCCATATCCACACTAAACTCGGAC
TTGGCGAAGAGATCTCGGACGGCA
BO04758.3prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 12:10:56
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG3059-PB | 1395 | NTPase-RB | 537..1392 | 874..19 | 4280 | 100 | Minus |
| CG3059-PA | 1386 | NTPase-RA | 528..1383 | 874..19 | 4280 | 100 | Minus |
| CG3059-PD | 816 | NTPase-RD | 1..813 | 831..19 | 4065 | 100 | Minus |
| CG3059-PC | 816 | NTPase-RC | 1..813 | 831..19 | 4065 | 100 | Minus |
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-13 15:21:25
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| NTPase-RF | 2291 | CG3059-RF | 909..1764 | 874..19 | 4280 | 100 | Minus |
| NTPase-RE | 2111 | CG3059-RE | 729..1584 | 874..19 | 4280 | 100 | Minus |
| NTPase-RA | 2095 | CG3059-RA | 714..1569 | 874..19 | 4280 | 100 | Minus |
Blast to na_all.dmel.RELEASE6 performed 2015-02-13 15:21:19
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2L | 23513712 | 2L | 2881382..2882147 | 109..874 | 3830 | 100 | Plus |
| 2L | 23513712 | 2L | 2881231..2881322 | 19..110 | 460 | 100 | Plus |
Blast to na_te.dros performed on 2015-02-13 15:21:24 has no hits.
BO04758.3prime Sim4 Records
Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 02:09:39 Download gff for
BO04758.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG3059-PB | 538..1395 | 15..873 | 99 | | Minus |
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 00:25:50 Download gff for
BO04758.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG3059-PA | 529..1386 | 15..873 | 99 | | Minus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-09-03 11:02:38 Download gff for
BO04758.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| NTPase-RA | 715..1579 | 8..873 | 99 | | Minus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-13 17:06:06 Download gff for
BO04758.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| NTPase-RA | 715..1579 | 8..873 | 99 | | Minus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-13 17:06:06 Download gff for
BO04758.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2L | 2881221..2881320 | 8..108 | 95 | <- | Plus |
| 2L | 2881382..2882146 | 109..873 | 100 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-09-03 11:02:38 Download gff for
BO04758.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2L | 2881221..2881320 | 8..108 | 95 | <- | Plus |
| arm_2L | 2881382..2882146 | 109..873 | 100 | | Plus |
BO04758.5prime Sequence
910 bp (874 high quality bases) assembled on 2005-12-01
> BO04758.5prime
GAAGTTATCAGTCGACATGAAATACGAATATAAGCTGCTGGCCACGGATG
AGAAGCCACCGCGGCGGAAAAGTAGCGGATCACCAAATGCCAGCAGTGGT
GGAAACCGCGGGCCCAGCGGCCTCAAGATCTCCTTCCTGTGCCTGATCAT
CTCCGTCATCCTCCTGCTCTTTGTCTTTGGCTTCGTCTCCGAGAACGCCA
GTCCGTATCTGGCCCGTTTGGCCTCCAAGTTTGGCTACAGCAAGGTGCAG
TATGCGGCCATCATCGATGCCGGATCGACGGGCAGCCGTGTGCTGGCCTA
CAAGTTCAATCGCAGCTTCATCGACAACAAACTGGTGCTGTACGAGGAGC
TGTTCAAGGAGCGCAAGCCGGGTCTGAGCTCCTTCGCGGATAATCCCGCC
GAGGGTGCCCACTCCATCAAACTGCTGCTGGACGAGGCCCGCGCCTTCAT
ACCCAAGGAGCACTGGTCTTCCACACCGCTGGTTCTGAAAGCGACCGCCG
GCCTGAGACTCCTGCCCGCCAGCAAGGCGGAAAACATTCTAAATGCCGTC
CGAGATCTCTTCGCCAAGTCCGAGTTTAGTGTGGATATGGATGCCGTGGA
GATCATGGACGGCACGGACGAGGGCATCTTCAGCTGGTTTACCGTGAACT
TCCTGCTGGGCCGCCTGTCCAAGACGAACCAGGCAGCTGCCTTGGACTTG
GGCGGCGGTAGCACGCAGGTAACCTTCTCGCCAACGGATCCGGACCAGGT
GCCCGTGTACGATAAGTACATGCACGAGGTGGTCACGTCCAGCAAGAAGA
TCAACGTCTTCACGCACAGCTATCTGGGACTGGGTCTAATGGCTGCACGC
CATGCTGTCTTCACGCACGGCTACAAGAAGGAGGATACGGTGCTGGAGAG
CGTCTGCGTG
BO04758.5prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 12:10:57
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG3059-PA | 1386 | NTPase-RA | 1..894 | 17..910 | 4470 | 100 | Plus |
| CG3059-PB | 1395 | NTPase-RB | 31..903 | 38..910 | 4365 | 100 | Plus |
| CG3059-PD | 816 | NTPase-RD | 1..324 | 587..910 | 1620 | 100 | Plus |
| CG3059-PC | 816 | NTPase-RC | 1..324 | 587..910 | 1620 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-13 13:32:32
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| NTPase-RA | 2095 | CG3059-RA | 186..1080 | 16..910 | 4475 | 100 | Plus |
| NTPase-RC | 2182 | CG3059-RC | 293..1166 | 37..910 | 4370 | 100 | Plus |
| NTPase-RD | 2107 | CG3059-RD | 218..1091 | 37..910 | 4370 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2015-02-13 13:32:30
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2L | 23513712 | 2L | 2881781..2882512 | 910..179 | 3660 | 100 | Minus |
| 2L | 23513712 | 2L | 2882691..2882834 | 180..37 | 720 | 100 | Minus |
Blast to na_te.dros performed on 2015-02-13 13:32:31 has no hits.
BO04758.5prime Sim4 Records
Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 02:09:39 Download gff for
BO04758.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG3059-PA | 1..894 | 17..910 | 100 | | Plus |
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 00:25:51 Download gff for
BO04758.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG3059-PA | 1..894 | 17..910 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-09-02 17:43:11 Download gff for
BO04758.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| NTPase-RA | 186..1080 | 16..910 | 100 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-13 15:49:05 Download gff for
BO04758.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| NTPase-RA | 186..1080 | 16..910 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-13 15:49:05 Download gff for
BO04758.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2L | 2881781..2882511 | 180..910 | 100 | <- | Minus |
| 2L | 2882692..2882833 | 38..179 | 100 | <- | Minus |
| 2L | 2882920..2882941 | 16..37 | 100 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-09-02 17:43:11 Download gff for
BO04758.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2L | 2882692..2882833 | 38..179 | 100 | <- | Minus |
| arm_2L | 2882920..2882941 | 16..37 | 100 | | Minus |
| arm_2L | 2881781..2882511 | 180..910 | 100 | <- | Minus |
BO04758.complete Sequence
1417 bp (1417 high quality bases) assembled on 2005-09-08
GenBank Submission: FJ629860
> BO04758.complete
GAAGTTATCAGTCGACATGAAATACGAATATAAGCTGCTGGCCACGGATG
AGAAGCCACCGCGGCGGAAAAGTAGCGGATCACCAAATGCCAGCAGTGGT
GGAAACCGCGGGCCCAGCGGCCTCAAGATCTCCTTCCTGTGCCTGATCAT
CTCCGTCATCCTCCTGCTCTTTGTCTTTGGCTTCGTCTCCGAGAACGCCA
GTCCGTATCTGGCCCGTTTGGCCTCCAAGTTTGGCTACAGCAAGGTGCAG
TATGCGGCCATCATCGATGCCGGATCGACGGGCAGCCGTGTGCTGGCCTA
CAAGTTCAATCGCAGCTTCATCGACAACAAACTGGTGCTGTACGAGGAGC
TGTTCAAGGAGCGCAAGCCGGGTCTGAGCTCCTTCGCGGATAATCCCGCC
GAGGGTGCCCACTCCATCAAACTGCTGCTGGACGAGGCCCGCGCCTTCAT
ACCCAAGGAGCACTGGTCTTCCACACCGCTGGTTCTGAAAGCGACCGCCG
GCCTGAGACTCCTGCCCGCCAGCAAGGCGGAAAACATTCTAAATGCCGTC
CGAGATCTCTTCGCCAAGTCCGAGTTTAGTGTGGATATGGATGCCGTGGA
GATCATGGACGGCACGGACGAGGGCATCTTCAGCTGGTTTACCGTGAACT
TCCTGCTGGGCCGCCTGTCCAAGACGAACCAGGCAGCTGCCTTGGACTTG
GGCGGCGGTAGCACGCAGGTAACCTTCTCGCCAACGGATCCGGACCAGGT
GCCCGTGTACGATAAGTACATGCACGAGGTGGTCACGTCCAGCAAGAAGA
TCAACGTCTTCACGCACAGCTATCTGGGACTGGGTCTAATGGCTGCACGC
CATGCTGTCTTCACGCACGGCTACAAGAAGGAGGATACGGTGCTGGAGAG
CGTCTGCGTGAATCCCATAATCGCCAATCGCACGTGGACATACGGCAATG
TGCAGTACAAGGTCAGCGGCAAGGAGAATGGCAAGTCCAGTGCCGAGCAG
CCCATTGTGGACTTCGATGCCTGCCTGGAGCTGGTCAAGAGCAAGGTAAT
GCCGCTGGTCAAGCCCAAGCCGTTCACACTCAAGCAGCACGCGGTGGCCG
CGTTCAGCTACTACTTTGAGCGGGCCATCGAGTCGGGTCTGGTGGATCCA
CTGGCTGGCGGCGAGACCACGGTGGAAGCTTATCGCAAGAAGGCCCAGGA
GATCTGTGCCATTCCCAACGATGAGCAGCCCTTCATGTGCTTCGACCTTA
CCTTCATCTCGACGCTGCTGCGCGAAGGATTTGGCCTCAACGATGGCAAG
AAGATTAAGCTTTACAAGAAGATAGATGGCCACGAAATCTCCTGGGCCCT
CGGCTGTGCATACAACGTTCTGACTAGCGACGAGAAATTCAGTAATTCCG
CAAGCTTTCTAGACCAT
BO04758.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-27 15:01:11
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| NTPase-RA | 1386 | CG3059-PA | 1..1383 | 17..1399 | 6915 | 100 | Plus |
| NTPase-RE | 1395 | CG3059-PE | 31..1392 | 38..1399 | 6810 | 100 | Plus |
| NTPase-RF | 1575 | CG3059-PF | 352..1572 | 179..1399 | 6105 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 15:01:12
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| NTPase-RA | 2095 | CG3059-RA | 186..1569 | 16..1399 | 6920 | 100 | Plus |
| NTPase-RC | 2182 | CG3059-RC | 293..1655 | 37..1399 | 6815 | 100 | Plus |
| NTPase-RD | 2107 | CG3059-RD | 218..1580 | 37..1399 | 6815 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 15:01:08
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2L | 23513712 | 2L | 2881382..2882512 | 1309..179 | 5655 | 100 | Minus |
| 2L | 23513712 | 2L | 2882691..2882834 | 180..37 | 720 | 100 | Minus |
| 2L | 23513712 | 2L | 2881231..2881322 | 1399..1308 | 460 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-27 15:01:10 has no hits.
BO04758.complete Sim4 Records
Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-21 22:39:24 Download gff for
BO04758.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| NTPase-RA | 1..1386 | 17..1403 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-11 07:08:09 Download gff for
BO04758.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| NTPase-RA | 173..1566 | 16..1410 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 18:47:48 Download gff for
BO04758.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| NTPase-RA | 187..1569 | 17..1401 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 22:39:24 Download gff for
BO04758.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| NTPase-RA | 173..1566 | 16..1410 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 15:58:02 Download gff for
BO04758.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| NTPase-RA | 187..1569 | 17..1401 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 15:58:02 Download gff for
BO04758.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2L | 2881229..2881320 | 1310..1401 | 97 | <- | Minus |
| 2L | 2881382..2882511 | 180..1309 | 100 | <- | Minus |
| 2L | 2882692..2882833 | 38..179 | 100 | <- | Minus |
| 2L | 2882920..2882940 | 17..37 | 100 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 18:47:48 Download gff for
BO04758.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2L | 2881229..2881320 | 1310..1401 | 97 | <- | Minus |
| arm_2L | 2881382..2882511 | 180..1309 | 100 | <- | Minus |
| arm_2L | 2882692..2882833 | 38..179 | 100 | <- | Minus |
| arm_2L | 2882920..2882940 | 17..37 | 100 | | Minus |
BO04758.pep Sequence
Translation from 16 to 1417
> BO04758.pep
MKYEYKLLATDEKPPRRKSSGSPNASSGGNRGPSGLKISFLCLIISVILL
LFVFGFVSENASPYLARLASKFGYSKVQYAAIIDAGSTGSRVLAYKFNRS
FIDNKLVLYEELFKERKPGLSSFADNPAEGAHSIKLLLDEARAFIPKEHW
SSTPLVLKATAGLRLLPASKAENILNAVRDLFAKSEFSVDMDAVEIMDGT
DEGIFSWFTVNFLLGRLSKTNQAAALDLGGGSTQVTFSPTDPDQVPVYDK
YMHEVVTSSKKINVFTHSYLGLGLMAARHAVFTHGYKKEDTVLESVCVNP
IIANRTWTYGNVQYKVSGKENGKSSAEQPIVDFDACLELVKSKVMPLVKP
KPFTLKQHAVAAFSYYFERAIESGLVDPLAGGETTVEAYRKKAQEICAIP
NDEQPFMCFDLTFISTLLREGFGLNDGKKIKLYKKIDGHEISWALGCAYN
VLTSDEKFSNSASFLDH
BO04758.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 18:49:41
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| NTPase-PA | 461 | CG3059-PA | 1..461 | 1..461 | 2373 | 100 | Plus |
| NTPase-PE | 464 | CG3059-PE | 11..464 | 8..461 | 2335 | 100 | Plus |
| NTPase-PF | 524 | CG3059-PF | 11..524 | 8..461 | 2122 | 84 | Plus |
| NTPase-PC | 271 | CG3059-PC | 1..271 | 191..461 | 1421 | 100 | Plus |
| NTPase-PD | 271 | CG3059-PD | 1..271 | 191..461 | 1421 | 100 | Plus |
