Clone BO04803 Report

Search the DGRC for BO04803

Clone and Library Details

Library:BO
Tissue Source:D. melanogaster
Created by:Joe Carlson
Date Registered:2004-06-03
Comments:Infusion clones with open reading frames
Original Plate Number:48
Well:3
Vector:pDNR-Dual
Associated Gene/TranscriptCG11306-RA
Protein status:BO04803.pep: validated full length
Sequenced Size:1459

Clone Sequence Records

BO04803.3prime Sequence

930 bp (846 high quality bases) assembled on 2005-12-02

> BO04803.3prime
ATGGTCTAGAAAGCTTGCATTGTTGGTAAATAGCGTTGAAACAGCTCGAA
GAAAGTTTTTTTCAAACTCTTGCTCAGAAAACCGTTCCACGGAGGCCCTG
GCTGCGTTTCGAATGCCGTTCATTTCTGAGTTGTTAACAATAATATTTAA
TATGTTTTCTGCGTATTCAACGGCGTCAGTAGCCAGGAATCCGTTCTGAC
TTCCCGCGGAAGTTTCGACAATGTCAAGCAAAGGACCCCCTGACTTGTGG
GCCACCATTATAAGGCCAGCAGCCATGGACTCGACGATGCCGATGCCAAA
ATGTTCGTTCCACATAGTGTGAATGCCAATGTGGGCAGTTTGATACAACT
TAAGAAGGTCTTCGTAAGGGACATTCACACTAAATTGCACATTGTTTTCT
AGCGACAGATGCTTTGTCAGGTCCTGCATGTTTTTCAACCGCTCGTAGTC
ATCTTCATTTCGGCAGGAGCCCACAATAACCAACTTAATTTGGTTCCAAA
GGGCCTCGTCTTGGGCCAAGAGAGTTCGGAGCTCGTATATGGCTTGCAGC
TGGAGGGGATGGTCTTTCTCCGGGCGGAACTGTCCGACAGACAGTATGAT
GAATTCGTCGCCTTTTTCCGTGTGCTGAAGGCTCTTTAGGTGACTAACCT
CGCACGGAGGGTAAACCCGGTGTGTTTTGAAGGGCACATCCCACAGTTGC
AGAATATGATTCTCGGTCCACGAGGAGTTCACCATGATAGTCTCAGCACA
ACAGCCAACCCACTTGTACATTCTTGAGAAGAGGCGGTAGTAGGCAAGCT
TAGTCCAGGTGAGAAAGGGGTTCCTCGCCACGTACTTCTTGTTGTTGTGC
GACATCTGTCGCTGCTGAACCCTCTTCAGCATATCGGTGCTAATAAACCG
GATAGTGAACATAGCAGCCCACCTTGGACT

BO04803.3prime Blast Records

Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 12:11:34
Subject Length Description Subject Range Query Range Score Percent Strand
CG11306-PA 1428 CG11306-RA 548..1425 896..19 4390 100 Minus
CG11306-PA 1428 CG11306-RA 515..549 930..896 175 100 Minus
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-10 17:53:05
Subject Length Description Subject Range Query Range Score Percent Strand
CG11306-RB 1994 CG11306-RB 784..1694 930..19 4535 99.9 Minus
CG11306-RA 1563 CG11306-RA 608..1518 930..19 4535 99.9 Minus
Blast to na_all.dmel.RELEASE6 performed 2015-02-10 17:52:56
Subject Length Description Subject Range Query Range Score Percent Strand
3L 28110227 3L 21627462..21628136 771..97 3375 100 Minus
3L 28110227 3L 21627243..21627400 930..772 745 99.4 Minus
3L 28110227 3L 21628191..21628271 99..19 405 100 Minus
Blast to na_te.dros performed on 2015-02-10 17:53:01 has no hits.

BO04803.3prime Sim4 Records

Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 02:10:21 Download gff for BO04803.3prime
Subject Subject Range Query Range Percent Splice Strand
CG11306-PA 515..1428 15..930 99   Minus
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 00:26:53 Download gff for BO04803.3prime
Subject Subject Range Query Range Percent Splice Strand
CG11306-PA 515..1428 15..930 99   Minus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-15 02:43:09 Download gff for BO04803.3prime
Subject Subject Range Query Range Percent Splice Strand
CG11306-RA 608..1521 15..930 99   Minus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-10 19:08:10 Download gff for BO04803.3prime
Subject Subject Range Query Range Percent Splice Strand
CG11306-RA 608..1521 15..930 99   Minus
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-10 19:08:10 Download gff for BO04803.3prime
Subject Subject Range Query Range Percent Splice Strand
3L 21627243..21627400 772..930 99 -> Minus
3L 21627462..21628135 98..771 100 -> Minus
3L 21628193..21628274 15..97 97   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-15 02:43:09 Download gff for BO04803.3prime
Subject Subject Range Query Range Percent Splice Strand
arm_3L 21621293..21621374 15..97 97   Minus
arm_3L 21620343..21620500 772..930 99 -> Minus
arm_3L 21620562..21621235 98..771 100 -> Minus

BO04803.5prime Sequence

895 bp (810 high quality bases) assembled on 2005-11-29

> BO04803.5prime
GAAGTTATCAGTCGACATGTTTCTGTTTCTGTTTCTTCTCTGGTTGTTGT
TATCGCTTGTGTTGGTGGCAGTACTCTCTTTCCTTTTCCTGAGGCAATGG
TTGCTTGGCCGGAAGAATAAGTTGCACACATCGTCGGAAAATGGCATCAA
CGTGGGCATTTTTCACCCGTATTGCAACGCGGGTGGCGGCGGAGAACGCG
TCTTGTGGTGCGCCGTGAGAGCACTACAGGAAAAGTACCAGAACGCCAGG
ATGGTAATCTACACAGGCGACATAGACGCTTCTCCCAATTCCATACTGCA
AAAGGCCAAGAATGTCTTCAACATTGCCGTCGATAGTGACAATGTGAAGT
TCGTCTTCCTGAAGCAACGCCACTGGATCGAGGCCAAGAACTATCCTCAT
TTCACTCTGCTGGGCCAGAGCATTGGATCGATGGTCGTGGGTCTGGAGGC
ACTCTGCAGGTTTCCGCCCGACATCTACATCGACACCATGGGATACGCCT
TTACGTATCCTCTGTTCCGCTACTTGGCCCAGTCCAAGGTGGGCTGCTAT
GTTCACTATCCGGTTATTAGCACCGATATGCTGAAGAGGGTTCAGCAGCG
ACAGATGTCGCACAACAACAAGAAGTACGTGGCGAGGAACCCCTTTCTCA
CCTGGACTAAGCTTGCCTACTACCGCCTCTTCTCAAGAATGTACAAGTGG
GTTGGCTGTTGTGCTGAGACTATCATGGTGAACTCCTCGTGGACCGAGAA
TCATATTCTGCAACTGTGGGATGTGCCCTTCAAAACACACCGGGTTTACC
CTCCGTGCGAGGTTAGTCACCTAAAGAGCCTTCAGCACACGGAAAAAGGC
GACGAATTCATCATACTGTCTGTCGGACCGTTCCGCCCGGAGAAA

BO04803.5prime Blast Records

Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 12:11:34
Subject Length Description Subject Range Query Range Score Percent Strand
CG11306-PA 1428 CG11306-RA 1..879 17..895 4370 99.8 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-12 06:27:23
Subject Length Description Subject Range Query Range Score Percent Strand
CG11306-RB 1994 CG11306-RB 270..1148 17..895 4380 99.9 Plus
CG11306-RA 1563 CG11306-RA 94..972 17..895 4380 99.9 Plus
Blast to na_all.dmel.RELEASE6 performed 2015-02-12 06:27:15
Subject Length Description Subject Range Query Range Score Percent Strand
3L 28110227 3L 21626940..21627400 228..688 2305 100 Plus
3L 28110227 3L 21627462..21627668 689..895 1020 99.5 Plus
3L 28110227 3L 21626432..21626625 37..230 970 100 Plus
Blast to na_te.dros performed on 2015-02-12 06:27:19 has no hits.

BO04803.5prime Sim4 Records

Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 02:10:22 Download gff for BO04803.5prime
Subject Subject Range Query Range Percent Splice Strand
CG11306-PA 1..876 17..892 99   Plus
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 00:26:55 Download gff for BO04803.5prime
Subject Subject Range Query Range Percent Splice Strand
CG11306-PA 1..876 17..892 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-29 05:27:13 Download gff for BO04803.5prime
Subject Subject Range Query Range Percent Splice Strand
CG11306-RA 85..969 9..892 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-12 08:10:52 Download gff for BO04803.5prime
Subject Subject Range Query Range Percent Splice Strand
CG11306-RA 85..969 9..892 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-12 08:10:52 Download gff for BO04803.5prime
Subject Subject Range Query Range Percent Splice Strand
3L 21626432..21626624 37..229 100 -> Plus
3L 21626942..21627400 230..688 100 -> Plus
3L 21627462..21627665 689..892 99   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-29 05:27:13 Download gff for BO04803.5prime
Subject Subject Range Query Range Percent Splice Strand
arm_3L 21620562..21620765 689..892 99   Plus
arm_3L 21619532..21619724 37..229 100 -> Plus
arm_3L 21620042..21620500 230..688 100 -> Plus

BO04803.complete Sequence

1459 bp (1459 high quality bases) assembled on 2005-09-08

GenBank Submission: FJ629866

> BO04803.complete
GAAGTTATCAGTCGACATGTTTCTGTTTCTGTTTCTTCTCTGGTTGTTGT
TATCGCTTGTGTTGGTGGCAGTACTCTCTTTCCTTTTCCTGAGGCAATGG
TTGCTTGGCCGGAAGAATAAGTTGCACACATCGTCGGAAAATGGCATCAA
CGTGGGCATTTTTCACCCGTATTGCAACGCGGGTGGCGGCGGAGAACGCG
TCTTGTGGTGCGCCGTGAGAGCACTACAGGAAAAGTACCAGAACGCCAGG
ATGGTAATCTACACAGGCGACATAGACGCTTCTCCCAATTCCATACTGCA
AAAGGCCAAGAATGTCTTCAACATTGCCGTCGATAGTGACAATGTGAAGT
TCGTCTTCCTGAAGCAACGCCACTGGATCGAGGCCAAGAACTATCCTCAT
TTCACTCTGCTGGGCCAGAGCATTGGATCGATGGTCGTGGGTCTGGAGGC
ACTCTGCAGGTTTCCGCCCGACATCTACATCGACACCATGGGATACGCCT
TTACGTATCCTCTGTTCCGCTACTTGGCCCAGTCCAAGGTGGGCTGCTAT
GTTCACTATCCGGTTATTAGCACCGATATGCTGAAGAGGGTTCAGCAGCG
ACAGATGTCGCACAACAACAAGAAGTACGTGGCGAGGAACCCCTTTCTCA
CCTGGACTAAGCTTGCCTACTACCGCCTCTTCTCAAGAATGTACAAGTGG
GTTGGCTGTTGTGCTGAGACTATCATGGTGAACTCCTCGTGGACCGAGAA
TCATATTCTGCAACTGTGGGATGTGCCCTTCAAAACACACCGGGTTTACC
CTCCGTGCGAGGTTAGTCACCTAAAGAGCCTTCAGCACACGGAAAAAGGC
GACGAATTCATCATACTGTCTGTCGGACAGTTCCGCCCGGAGAAAGACCA
TCCCCTCCAGCTGCAAGCCATATACGAGCTCCGAACTCTCTTGGCCCAAG
ACGAGGCCCTTTGGAACCAAATTAAGTTGGTTATTGTGGGCTCCTGCCGA
AATGAAGATGACTACGAGCGGTTGAAAAACATGCAGGACCTGACAAAGCA
TCTGTCGCTAGAAAACAATGTGCAATTTAGTGTGAATGTCCCTTACGAAG
ACCTTCTTAAGTTGTATCAAACTGCCCACATTGGCATTCACACTATGTGG
AACGAACATTTTGGCATCGGCATCGTCGAGTCCATGGCTGCTGGCCTTAT
AATGGTGGCCCACAAGTCAGGGGGTCCTTTGCTTGACATTGTCGAAACTT
CCGCGGGAAGTCAGAACGGATTCCTGGCTACTGACGCCGTTGAATACGCA
GAAAACATATTAAATATTATTGTTAACAACTCAGAAATGAACGGCATTCG
AAACGCAGCCAGGGCCTCCGTGGAACGGTTTTCTGAGCAAGAGTTTGAAA
AAAACTTTCTTCGAGCTGTTTCAACGCTATTTACCAACAATGCAAGCTTT
CTAGACCAT

BO04803.complete Blast Records

Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-27 07:20:01
Subject Length Description Subject Range Query Range Score Percent Strand
CG11306-RB 1428 CG11306-PB 1..1425 17..1441 7125 100 Plus
CG11306-RA 1428 CG11306-PA 1..1425 17..1441 7125 100 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 07:20:03
Subject Length Description Subject Range Query Range Score Percent Strand
CG11306-RB 1994 CG11306-RB 270..1694 17..1441 7125 100 Plus
CG11306-RA 1563 CG11306-RA 94..1518 17..1441 7125 100 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 07:19:59
Subject Length Description Subject Range Query Range Score Percent Strand
3L 28110227 3L 21627462..21628136 689..1363 3375 100 Plus
3L 28110227 3L 21626940..21627400 228..688 2305 100 Plus
3L 28110227 3L 21626432..21626625 37..230 970 100 Plus
3L 28110227 3L 21628191..21628271 1361..1441 405 100 Plus
Blast to na_te.dros performed on 2014-11-27 07:20:01 has no hits.

BO04803.complete Sim4 Records

Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-21 22:39:21 Download gff for BO04803.complete
Subject Subject Range Query Range Percent Splice Strand
CG11306-RA 1..1428 17..1445 99   Plus
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-11 07:08:06 Download gff for BO04803.complete
Subject Subject Range Query Range Percent Splice Strand
CG11306-RA 72..1508 9..1445 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 05:12:15 Download gff for BO04803.complete
Subject Subject Range Query Range Percent Splice Strand
CG11306-RA 100..1518 23..1443 99   Plus
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 22:39:21 Download gff for BO04803.complete
Subject Subject Range Query Range Percent Splice Strand
CG11306-RA 72..1508 9..1445 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 08:08:25 Download gff for BO04803.complete
Subject Subject Range Query Range Percent Splice Strand
CG11306-RA 100..1518 23..1443 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 08:08:25 Download gff for BO04803.complete
Subject Subject Range Query Range Percent Splice Strand
3L 21626432..21626624 37..229 100 -> Plus
3L 21626942..21627400 230..688 100 -> Plus
3L 21627462..21628135 689..1362 100 -> Plus
3L 21628193..21628271 1363..1443 97   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 05:12:15 Download gff for BO04803.complete
Subject Subject Range Query Range Percent Splice Strand
arm_3L 21619532..21619724 37..229 100 -> Plus
arm_3L 21620042..21620500 230..688 100 -> Plus
arm_3L 21620562..21621235 689..1362 100 -> Plus
arm_3L 21621293..21621371 1363..1443 97   Plus

BO04803.pep Sequence

Translation from 16 to 1459

> BO04803.pep
MFLFLFLLWLLLSLVLVAVLSFLFLRQWLLGRKNKLHTSSENGINVGIFH
PYCNAGGGGERVLWCAVRALQEKYQNARMVIYTGDIDASPNSILQKAKNV
FNIAVDSDNVKFVFLKQRHWIEAKNYPHFTLLGQSIGSMVVGLEALCRFP
PDIYIDTMGYAFTYPLFRYLAQSKVGCYVHYPVISTDMLKRVQQRQMSHN
NKKYVARNPFLTWTKLAYYRLFSRMYKWVGCCAETIMVNSSWTENHILQL
WDVPFKTHRVYPPCEVSHLKSLQHTEKGDEFIILSVGQFRPEKDHPLQLQ
AIYELRTLLAQDEALWNQIKLVIVGSCRNEDDYERLKNMQDLTKHLSLEN
NVQFSVNVPYEDLLKLYQTAHIGIHTMWNEHFGIGIVESMAAGLIMVAHK
SGGPLLDIVETSAGSQNGFLATDAVEYAENILNIIVNNSEMNGIRNAARA
SVERFSEQEFEKNFLRAVSTLFTNNASFLDH

BO04803.pep Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 19:43:03
Subject Length Description Subject Range Query Range Score Percent Strand
CG11306-PB 475 CG11306-PB 1..475 1..475 2507 100 Plus
CG11306-PA 475 CG11306-PA 1..475 1..475 2507 100 Plus
CG1291-PA 424 CG1291-PA 223..356 281..414 155 30.9 Plus