Clone BO04805 Report

Search the DGRC for BO04805

Clone and Library Details

Library:BO
Tissue Source:D. melanogaster
Created by:Joe Carlson
Date Registered:2004-06-03
Comments:Infusion clones with open reading frames
Original Plate Number:48
Well:5
Vector:pDNR-Dual
Associated Gene/TranscriptCG1847-RA
Protein status:BO04805.pep: validated full length
Sequenced Size:994

Clone Sequence Records

BO04805.3prime Sequence

945 bp (853 high quality bases) assembled on 2005-12-02

> BO04805.3prime
ATGGTCTAGAAAGCTTGCGAAGAGCTTCTGCATGTGAATGCGATCCTGGA
CGTTACGTGCCTGCTGCTGATCCTCGATGGACTTGAGCTCCTTAGACACG
GTCGACTTGAGGCTGGCGTCCAAGGCCAAGGCGTCGAGGAAGTCGCGACG
TGCCTGTGCTGGATTCCAGGCACCCGCATGGGCCTTGGCCCGACGAAAAA
GTGCCTTGACATTGCGCGGATCCAGGGTGAGCACCTCGTTGCAGTGCTCG
ATCACAGCGTAGAAGTCGCCGGCGATCAACCGACATTGCGCGTAGTTCAA
CAACAGCGGTGTCTTGATGGCCGCCAGCTCCTGCCACTCCTCGTCGTGCG
GCTTCTCCTTTAGCATCAGCTGCTCCACAATTCCGACAGCCTCGCGGTAG
CAGGTCTCCGCCTCTGTGAACCGACTGGCCTTATAGAAGTTGTTGCCCCG
TTCGCGCAGCGTACTGGTGGCCAGCATCTTTTCGTCGTCGGACATCTGCC
AGCGCTCTTTTTCGTACTGCTCGGGCAGCTCAATGGAGAACAGTTCAATG
ATGAACTCCAGATCGGAAGGATTTTGCAGCAGCTCATCCAGGTCGGTGTA
CCCAATGCCCTCGTTCTGCAATGTCATTCCGCAGCAGTGACGTCGCTCCT
CCGGTTTCTTGCCAATGTCCCGCAGGGTCTTGGATATAAAAGGATATTGA
GCGCAGAGCGACTTATGTACCGTGAACTTGGCCACTTCGTTAAGGGACAT
CTGCTGCACAATCAGCTCCCAGACCTCTAGCTTAAACTTCTTCCCCAGGA
CCAGCTCCATGGGCTTCTCCATCTTGCGGCTATCATCGATGATGCGACTG
TCGCCGGCCCTCCGCGTTTGAAAGTGGAACTTCACCCTGGTGCCCCGGGG
TAGCTCGATGTAGGCGTTTCCCGGATTGAGGATCTCCTTTCGTAT

BO04805.3prime Blast Records

Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 12:11:37
Subject Length Description Subject Range Query Range Score Percent Strand
CG1847-PA 963 CG1847-RA 34..960 945..19 4585 99.7 Minus
CG1847-PB 996 CG1847-RB 126..993 886..19 4340 100 Minus
CG1847-PB 996 CG1847-RB 34..93 945..886 250 96.6 Minus
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-13 05:40:00
Subject Length Description Subject Range Query Range Score Percent Strand
CG1847-RC 1776 CG1847-RC 111..1037 945..19 4605 99.8 Minus
CG1847-RA 1776 CG1847-RA 111..1037 945..19 4605 99.8 Minus
Blast to na_all.dmel.RELEASE6 performed 2015-02-13 05:39:58
Subject Length Description Subject Range Query Range Score Percent Strand
X 23542271 X 11869739..11870429 709..19 3455 100 Minus
X 23542271 X 11869481..11869658 886..709 890 100 Minus
X 23542271 X 11869280..11869343 945..882 290 96.9 Minus
Blast to na_te.dros performed on 2015-02-13 05:39:59 has no hits.

BO04805.3prime Sim4 Records

Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 02:10:25 Download gff for BO04805.3prime
Subject Subject Range Query Range Percent Splice Strand
CG1847-PA 34..963 18..945 99   Minus
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 00:26:59 Download gff for BO04805.3prime
Subject Subject Range Query Range Percent Splice Strand
CG1847-PA 34..963 18..945 99   Minus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-09-01 17:55:08 Download gff for BO04805.3prime
Subject Subject Range Query Range Percent Splice Strand
CG1847-RA 111..1037 19..945 99   Minus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-13 07:56:02 Download gff for BO04805.3prime
Subject Subject Range Query Range Percent Splice Strand
CG1847-RA 111..1037 19..945 99   Minus
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-13 07:56:02 Download gff for BO04805.3prime
Subject Subject Range Query Range Percent Splice Strand
X 11869280..11869339 886..945 96 -> Minus
X 11869482..11869658 709..885 100 -> Minus
X 11869740..11870429 19..708 100   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-09-01 17:55:08 Download gff for BO04805.3prime
Subject Subject Range Query Range Percent Splice Strand
arm_X 11763515..11763691 709..885 100 -> Minus
arm_X 11763313..11763372 886..945 96 -> Minus
arm_X 11763773..11764462 19..708 100   Minus

BO04805.5prime Sequence

958 bp (827 high quality bases) assembled on 2005-11-29

> BO04805.5prime
GAAGTTATCAGTCGACATGCAGTCGCGCAGCAAGTCCGATATGAAGCCCA
TACGAAAGGAGATCCTCAATCCGGGAAACGCCTACATCGAGCTAACCCCG
GGCACCAGGGTGAAGTTCCACTTTCAAACGCGGAGGGCCGGCGACAGTCG
CATCATCGATGATAGCCGCAAGATGGAGAAGCCCATGGAGCTGGTCCTGG
GGAAGAAGTTTAAGCTAGAGGTCTGGGAGCTGATTGTGCAGCAGATGTCC
CTTAACGAAGTGGCCAAGTTCACGGTACATAAGTCGCTCTGCGCTCAATA
TCCTTTTATATCCAAGACCCTGCGGGACATTGGCAAGAAACCGGAGGAGC
GACGTCACTGCTGCGGAATGACATTGCAGAACGAGGGCATTGGGTACACC
GACCTGGATGAGCTGCTGCAAAATCCTTCCGATCTGGAGTTCATCATTGA
ACTGTTCTCCATTGAGCTGCCCGAGCAGTACGAAAAAGAGCGCTGGCAGA
TGTCCGACGACGAAAAGATGCTGGCCACCAGTACGCTGCGCGAACGGGGC
AACAACTTCTATAAGGCCAGTCGGTTCACAGAGGCGGAGACCTGCTACCG
CGAGGCTGTCGGAATTGTGGAGCAGCTGATGCTAAAGGAGAAGCCGCACG
ACGAGGAGTGGCAGGAGCTGGCGGCCATCAAGACACCGCTGTTGTTGAAC
TACGCGCAATGTCGGTTGATCGCCGGCGACTTCTACGCTGTGATCGAGCA
CTGCAACGAGGTGCTCACCCTGGATCCGCGCAATGTCAAGGCACTTTTTC
GTCGGGCCAAGGCCCATGCGGGTGCCTGGAATCCAGCACAGGCACGTCGC
GACTTCCTCGACGCCTTGGCCTTGGACGCCAGCCTCAAGTCGACCGTGTC
TAAGGAGCTCAAGTCCATCGAGGATCAGCAGCAGGCACGTAACGTCCAGG
ATCGCATT

BO04805.5prime Blast Records

Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 12:11:37
Subject Length Description Subject Range Query Range Score Percent Strand
CG1847-PA 963 CG1847-RA 1..942 17..958 4710 100 Plus
CG1847-PB 996 CG1847-RB 126..975 109..958 4250 100 Plus
CG1847-PB 996 CG1847-RB 1..93 17..109 465 100 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-09 18:40:06
Subject Length Description Subject Range Query Range Score Percent Strand
CG1847-RC 1776 CG1847-RC 78..1019 17..958 4710 100 Plus
CG1847-RA 1776 CG1847-RA 78..1019 17..958 4710 100 Plus
Blast to na_all.dmel.RELEASE6 performed 2015-02-09 18:40:00
Subject Length Description Subject Range Query Range Score Percent Strand
X 23542271 X 11869739..11870411 286..958 3365 100 Plus
X 23542271 X 11869481..11869658 109..286 890 100 Plus
X 23542271 X 11869247..11869343 17..113 485 100 Plus
Blast to na_te.dros performed on 2015-02-09 18:40:03 has no hits.

BO04805.5prime Sim4 Records

Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 02:10:26 Download gff for BO04805.5prime
Subject Subject Range Query Range Percent Splice Strand
CG1847-PA 1..942 17..958 100   Plus
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 00:27:00 Download gff for BO04805.5prime
Subject Subject Range Query Range Percent Splice Strand
CG1847-PA 1..942 17..958 100   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-13 03:59:44 Download gff for BO04805.5prime
Subject Subject Range Query Range Percent Splice Strand
CG1847-RA 67..1019 5..958 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-09 21:13:34 Download gff for BO04805.5prime
Subject Subject Range Query Range Percent Splice Strand
CG1847-RA 67..1019 5..958 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-09 21:13:34 Download gff for BO04805.5prime
Subject Subject Range Query Range Percent Splice Strand
X 11869236..11869339 5..109 95 -> Plus
X 11869482..11869658 110..286 100 -> Plus
X 11869740..11870411 287..958 100   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-13 03:59:44 Download gff for BO04805.5prime
Subject Subject Range Query Range Percent Splice Strand
arm_X 11763269..11763372 5..109 95 -> Plus
arm_X 11763515..11763691 110..286 100 -> Plus
arm_X 11763773..11764444 287..958 100   Plus

BO04805.complete Sequence

994 bp (994 high quality bases) assembled on 2005-09-08

GenBank Submission: FJ629868

> BO04805.complete
GAAGTTATCAGTCGACATGCAGTCGCGCAGCAAGTCCGATATGAAGCCCA
TACGAAAGGAGATCCTCAATCCGGGAAACGCCTACATCGAGCTAACCCCG
GGCACCAGGGTGAAGTTCCACTTTCAAACGCGGAGGGCCGGCGACAGTCG
CATCATCGATGATAGCCGCAAGATGGAGAAGCCCATGGAGCTGGTCCTGG
GGAAGAAGTTTAAGCTAGAGGTCTGGGAGCTGATTGTGCAGCAGATGTCC
CTTAACGAAGTGGCCAAGTTCACGGTACATAAGTCGCTCTGCGCTCAATA
TCCTTTTATATCCAAGACCCTGCGGGACATTGGCAAGAAACCGGAGGAGC
GACGTCACTGCTGCGGAATGACATTGCAGAACGAGGGCATTGGGTACACC
GACCTGGATGAGCTGCTGCAAAATCCTTCCGATCTGGAGTTCATCATTGA
ACTGTTCTCCATTGAGCTGCCCGAGCAGTACGAAAAAGAGCGCTGGCAGA
TGTCCGACGACGAAAAGATGCTGGCCACCAGTACGCTGCGCGAACGGGGC
AACAACTTCTATAAGGCCAGTCGGTTCACAGAGGCGGAGACCTGCTACCG
CGAGGCTGTCGGAATTGTGGAGCAGCTGATGCTAAAGGAGAAGCCGCACG
ACGAGGAGTGGCAGGAGCTGGCGGCCATCAAGACACCGCTGTTGTTGAAC
TACGCGCAATGTCGGTTGATCGCCGGCGACTTCTACGCTGTGATCGAGCA
CTGCAACGAGGTGCTCACCCTGGATCCGCGCAATGTCAAGGCACTTTTTC
GTCGGGCCAAGGCCCATGCGGGTGCCTGGAATCCAGCACAGGCACGTCGC
GACTTCCTCGACGCCTTGGCCTTGGACGCCAGCCTCAAGTCGACCGTGTC
TAAGGAGCTCAAGTCCATCGAGGATCAGCAGCAGGCACGTAACGTCCAGG
ATCGCATTCACATGCAGAAGCTCTTCGCAAGCTTTCTAGACCAT

BO04805.complete Blast Records

Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 01:14:18
Subject Length Description Subject Range Query Range Score Percent Strand
CG1847-RC 1029 CG1847-PC 1..960 17..976 4800 100 Plus
CG1847-RA 963 CG1847-PA 1..960 17..976 4800 100 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 01:14:19
Subject Length Description Subject Range Query Range Score Percent Strand
CG1847-RC 1776 CG1847-RC 78..1037 17..976 4800 100 Plus
CG1847-RA 1776 CG1847-RA 78..1037 17..976 4800 100 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 01:14:17
Subject Length Description Subject Range Query Range Score Percent Strand
X 23542271 X 11869739..11870429 286..976 3455 100 Plus
X 23542271 X 11869481..11869658 109..286 890 100 Plus
X 23542271 X 11869247..11869343 17..113 485 100 Plus
Blast to na_te.dros performed on 2014-11-28 01:14:18 has no hits.

BO04805.complete Sim4 Records

Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-21 22:39:03 Download gff for BO04805.complete
Subject Subject Range Query Range Percent Splice Strand
CG1847-RA 1..963 17..977 99   Plus
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-11 07:07:45 Download gff for BO04805.complete
Subject Subject Range Query Range Percent Splice Strand
CG1847-RA 49..1019 5..976 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 20:43:24 Download gff for BO04805.complete
Subject Subject Range Query Range Percent Splice Strand
CG1847-RA 78..1037 17..978 99   Plus
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 22:39:04 Download gff for BO04805.complete
Subject Subject Range Query Range Percent Splice Strand
CG1847-RA 49..1019 5..976 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 01:48:27 Download gff for BO04805.complete
Subject Subject Range Query Range Percent Splice Strand
CG1847-RA 78..1037 17..978 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 01:48:27 Download gff for BO04805.complete
Subject Subject Range Query Range Percent Splice Strand
X 11869247..11869339 17..109 100 -> Plus
X 11869482..11869658 110..286 100 -> Plus
X 11869740..11870429 287..978 99   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 20:43:24 Download gff for BO04805.complete
Subject Subject Range Query Range Percent Splice Strand
arm_X 11763280..11763372 17..109 100 -> Plus
arm_X 11763515..11763691 110..286 100 -> Plus
arm_X 11763773..11764462 287..978 99   Plus

BO04805.pep Sequence

Translation from 16 to 994

> BO04805.pep
MQSRSKSDMKPIRKEILNPGNAYIELTPGTRVKFHFQTRRAGDSRIIDDS
RKMEKPMELVLGKKFKLEVWELIVQQMSLNEVAKFTVHKSLCAQYPFISK
TLRDIGKKPEERRHCCGMTLQNEGIGYTDLDELLQNPSDLEFIIELFSIE
LPEQYEKERWQMSDDEKMLATSTLRERGNNFYKASRFTEAETCYREAVGI
VEQLMLKEKPHDEEWQELAAIKTPLLLNYAQCRLIAGDFYAVIEHCNEVL
TLDPRNVKALFRRAKAHAGAWNPAQARRDFLDALALDASLKSTVSKELKS
IEDQQQARNVQDRIHMQKLFASFLDH

BO04805.pep Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 19:33:55
Subject Length Description Subject Range Query Range Score Percent Strand
CG1847-PA 320 CG1847-PA 1..320 1..320 1658 100 Plus
CG1847-PC 342 CG1847-PC 1..320 1..320 1658 100 Plus
FKBP59-PB 439 CG4535-PB 239..389 158..315 174 25.9 Plus
FKBP59-PA 439 CG4535-PA 239..389 158..315 174 25.9 Plus
CG8336-PD 383 CG8336-PD 148..383 98..321 157 25.4 Plus