Clone Sequence Records
BO04811.3prime Sequence
377 bp (376 high quality bases) assembled on 2005-12-02
> BO04811.3prime
ATGGTCTAGAAAGCTTGCCGCGAAGATCTGGCCAACGCCACTCTGGTCAC
CATAACGAATAATATCGGCTCCATAGCAAGGATGTGCGCGCTGAATGAGA
AGATCGATAGGGTAAGTATCAATTTTCGTTACATACATATCCTCGTAGAC
TGAGCAACAAACCCATTTCAGGTCGTCTTTGTGGGCAACTTTCTGCGAGT
TAACCCCATTTCCATGAAGCTGCTGGCGTACGCAATGGAGTTCTGGTCCA
ATGGCACAATGAAGGGTCTTTTCCTGGAGCACGAGGGATACTTTGGGGCT
CTGGGTTGCCTGCTGCAGTTCAACGGCGAGCTGGCAGCCGCCCTTAACGA
CGGAGTGGAGCATGTCGACTGATAACT
BO04811.3prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 12:11:41
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG5725-PD | 1206 | fbl-RD | 909..1101 | 171..363 | 965 | 100 | Plus |
| CG5725-PB | 1254 | fbl-RB | 957..1149 | 171..363 | 965 | 100 | Plus |
| CG5725-PA | 1260 | fbl-RA | 963..1155 | 171..363 | 965 | 100 | Plus |
| CG5725-PC | 1206 | fbl-RC | 909..1101 | 171..363 | 965 | 100 | Plus |
| CG5725-PE | 1539 | fbl-RE | 1242..1434 | 171..363 | 965 | 100 | Plus |
| CG5725-PD | 1206 | fbl-RD | 817..911 | 19..113 | 475 | 100 | Plus |
| CG5725-PB | 1254 | fbl-RB | 865..959 | 19..113 | 475 | 100 | Plus |
| CG5725-PA | 1260 | fbl-RA | 871..965 | 19..113 | 475 | 100 | Plus |
| CG5725-PC | 1206 | fbl-RC | 817..911 | 19..113 | 475 | 100 | Plus |
| CG5725-PE | 1539 | fbl-RE | 1150..1244 | 19..113 | 475 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-11 04:48:11
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| fbl-RG | 2352 | CG5725-RG | 1324..1516 | 171..363 | 965 | 100 | Plus |
| fbl-RF | 1370 | CG5725-RF | 801..993 | 171..363 | 965 | 100 | Plus |
| fbl-RE | 2386 | CG5725-RE | 1358..1550 | 171..363 | 965 | 100 | Plus |
| fbl-RG | 2352 | CG5725-RG | 1232..1326 | 19..113 | 475 | 100 | Plus |
| fbl-RF | 1370 | CG5725-RF | 709..803 | 19..113 | 475 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2015-02-11 04:48:07
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3L | 28110227 | 3L | 20390733..20391077 | 19..363 | 1725 | 100 | Plus |
Blast to na_te.dros performed on 2015-02-11 04:48:09 has no hits.
BO04811.3prime Sim4 Records
Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 02:10:31 Download gff for
BO04811.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG5725-PA | 871..962 | 19..110 | 100 | | Plus |
| CG5725-PA | 963..1157 | 171..366 | 99 | | Plus |
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 00:27:06 Download gff for
BO04811.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG5725-PB | 865..956 | 19..110 | 100 | == | Plus |
| CG5725-PB | 957..1151 | 171..366 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-23 06:13:44 Download gff for
BO04811.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| fbl-RE | 1266..1357 | 19..110 | 100 | == | Plus |
| fbl-RE | 1358..1552 | 171..366 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-11 09:34:50 Download gff for
BO04811.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| fbl-RE | 1266..1357 | 19..110 | 100 | == | Plus |
| fbl-RE | 1358..1552 | 171..366 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-11 09:34:50 Download gff for
BO04811.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3L | 20390733..20391079 | 19..366 | 99 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-23 06:13:44 Download gff for
BO04811.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3L | 20383833..20384179 | 19..366 | 99 | | Plus |
BO04811.5prime Sequence
377 bp (376 high quality bases) assembled on 2005-11-29
> BO04811.5prime
GAAGTTATCAGTCGACATGCTCCACTCCGTCGTTAAGGGCGGCTGCCAGC
TCGCCGTTGAACTGCAGCAGGCAACCCAGAGCCCCAAAGTATCCCTCGTG
CTCCAGGAAAAGACCCTTCATTGTGCCATTGGACCAGAACTCCATTGCGT
ACGCCAGCAGCTTCATGGAAATGGGGTTAACTCGCAGAAAGTTGCCCACA
AAGACGACCTGAAATGGGTTTGTTGCTCAGTCTACGAGGATATGTATGTA
ACGAAAATTGATACTTACCCTATCGATCTTCTCATTCAGCGCGCACATCC
TTGCTATGGAGCCGATATTATTCGTTATGGTGACCAGAGTGGCGTTGGCC
AGATCTTCGCGGCAAGCTTTCTAGACC
BO04811.5prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 12:11:42
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG5725-PD | 1206 | fbl-RD | 909..1101 | 209..17 | 965 | 100 | Minus |
| CG5725-PB | 1254 | fbl-RB | 957..1149 | 209..17 | 965 | 100 | Minus |
| CG5725-PA | 1260 | fbl-RA | 963..1155 | 209..17 | 965 | 100 | Minus |
| CG5725-PC | 1206 | fbl-RC | 909..1101 | 209..17 | 965 | 100 | Minus |
| CG5725-PE | 1539 | fbl-RE | 1242..1434 | 209..17 | 965 | 100 | Minus |
| CG5725-PD | 1206 | fbl-RD | 817..911 | 361..267 | 475 | 100 | Minus |
| CG5725-PB | 1254 | fbl-RB | 865..959 | 361..267 | 475 | 100 | Minus |
| CG5725-PA | 1260 | fbl-RA | 871..965 | 361..267 | 475 | 100 | Minus |
| CG5725-PC | 1206 | fbl-RC | 817..911 | 361..267 | 475 | 100 | Minus |
| CG5725-PE | 1539 | fbl-RE | 1150..1244 | 361..267 | 475 | 100 | Minus |
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-10 17:53:51
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| fbl-RG | 2352 | CG5725-RG | 1324..1516 | 209..17 | 965 | 100 | Minus |
| fbl-RF | 1370 | CG5725-RF | 801..993 | 209..17 | 965 | 100 | Minus |
| fbl-RE | 2386 | CG5725-RE | 1358..1550 | 209..17 | 965 | 100 | Minus |
| fbl-RG | 2352 | CG5725-RG | 1232..1326 | 361..267 | 475 | 100 | Minus |
| fbl-RF | 1370 | CG5725-RF | 709..803 | 361..267 | 475 | 100 | Minus |
Blast to na_all.dmel.RELEASE6 performed 2015-02-10 17:53:42
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3L | 28110227 | 3L | 20390733..20391077 | 361..17 | 1725 | 100 | Minus |
Blast to na_te.dros performed on 2015-02-10 17:53:46 has no hits.
BO04811.5prime Sim4 Records
Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 02:10:32 Download gff for
BO04811.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG5725-PA | 871..962 | 270..361 | 100 | | Minus |
| CG5725-PA | 963..1157 | 14..209 | 99 | | Minus |
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 00:27:08 Download gff for
BO04811.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG5725-PB | 957..1151 | 14..209 | 99 | | Minus |
| CG5725-PB | 865..956 | 270..361 | 100 | == | Minus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-15 02:43:12 Download gff for
BO04811.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| fbl-RE | 1266..1357 | 270..361 | 100 | == | Minus |
| fbl-RE | 1358..1552 | 14..209 | 99 | | Minus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-10 19:09:43 Download gff for
BO04811.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| fbl-RE | 1266..1357 | 270..361 | 100 | == | Minus |
| fbl-RE | 1358..1552 | 14..209 | 99 | | Minus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-10 19:09:43 Download gff for
BO04811.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3L | 20390733..20391079 | 14..361 | 99 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-15 02:43:12 Download gff for
BO04811.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3L | 20383833..20384179 | 14..361 | 99 | | Minus |
BO04811.complete Sequence
379 bp (379 high quality bases) assembled on 2005-10-17
GenBank Submission: FJ629870
> BO04811.complete
GAAGTTATCAGTCGACATGCTCCACTCCGTCGTTAAGGGCGGCTGCCAGC
TCGCCGTTGAACTGCAGCAGGCAACCCAGAGCCCCAAAGTATCCCTCGTG
CTCCAGGAAAAGACCCTTCATTGTGCCATTGGACCAGAACTCCATTGCGT
ACGCCAGCAGCTTCATGGAAATGGGGTTAACTCGCAGAAAGTTGCCCACA
AAGACGACCTGAAATGGGTTTGTTGCTCAGTCTACGAGGATATGTATGTA
ACGAAAATTGATACTTACCCTATCGATCTTCTCATTCAGCGCGCACATCC
TTGCTATGGAGCCGATATTATTCGTTATGGTGACCAGAGTGGCGTTGGCC
AGATCTTCGCGGCAAGCTTTCTAGACCAT
BO04811.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed on 2014-11-27 13:35:24 has no hits.
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 13:35:25
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| fbl-RG | 2352 | CG5725-RG | 1324..1516 | 209..17 | 965 | 100 | Minus |
| fbl-RF | 1370 | CG5725-RF | 801..993 | 209..17 | 965 | 100 | Minus |
| fbl-RE | 2386 | CG5725-RE | 1358..1550 | 209..17 | 965 | 100 | Minus |
| fbl-RG | 2352 | CG5725-RG | 1232..1326 | 361..267 | 475 | 100 | Minus |
| fbl-RF | 1370 | CG5725-RF | 709..803 | 361..267 | 475 | 100 | Minus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 13:35:22
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3L | 28110227 | 3L | 20390733..20391077 | 361..17 | 1725 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-27 13:35:23 has no hits.
BO04811.complete Sim4 Records
Sim4 to dmel-all-CDS-r5.9.fasta performed on 2008-07-21 21:46:47 has no hits.
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-11 06:01:03 Download gff for
BO04811.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG33969-RB | 2266..2612 | 14..361 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 07:51:59 Download gff for
BO04811.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| fbl-RE | 1358..1550 | 17..209 | 100 | | Minus |
| fbl-RE | 1263..1357 | 270..363 | 97 | == | Minus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 21:46:47 Download gff for
BO04811.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG33969-RB | 2266..2612 | 14..361 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 14:21:53 Download gff for
BO04811.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| fbl-RE | 1263..1357 | 270..363 | 97 | == | Minus |
| fbl-RE | 1358..1550 | 17..209 | 100 | | Minus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 14:21:53 Download gff for
BO04811.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3L | 20390730..20391077 | 17..363 | 99 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 07:51:59 Download gff for
BO04811.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3L | 20383830..20384177 | 17..363 | 99 | | Minus |
BO04811.pep Sequence
Translation from 16 to 379
> BO04811.pep
MLHSVVKGGCQLAVELQQATQSPKVSLVLQEKTLHCAIGPELHCVRQQLH
GNGVNSQKVAHKDDLKWVCCSVYEDMYVTKIDTYPIDLLIQRAHPCYGAD
IIRYGDQSGVGQIFAASFLDH
Sequence BO04811.pep has no blast hits.
