Clone BO04814 Report

Search the DGRC for BO04814

Clone and Library Details

Library:BO
Tissue Source:D. melanogaster
Created by:Joe Carlson
Date Registered:2004-06-03
Comments:Infusion clones with open reading frames
Original Plate Number:48
Well:14
Vector:pDNR-Dual
Associated Gene/Transcript
Protein status:BO04814.pep: validated full length
Sequenced Size:355

Clone Sequence Records

BO04814.3prime Sequence

353 bp (352 high quality bases) assembled on 2005-12-02

> BO04814.3prime
ATGGTCTAGAAAGCTTGCGAAAGGAAGAAGGACCCCGCAGACCTCGATGT
CCTCGGTAAACACTTTACGGCGTCTACTCGAAATGTATCTCATGGATGCG
AAAGCCCGGCCCGGCACGGCCCGGCCCGGCGTTGCTGACTCATTTTCCTT
GAGTTCCGAACAGGTTGGCCGACTCACACTTCCACACACATCCGCACCCC
TGCAATCCGGACTCAAACAGTCGCACTCAGATACAAATGCAAATGCCCAC
ACAACTGCGCAAACATTGCGAAAAACATCTACTTGGGGTTCGGGAACAAC
AACTACGCGCAAGCGGAATGAAATGCCCTGAAATTGCATGTCGACTGATA
ACT

BO04814.3prime Blast Records

Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 12:11:44
Subject Length Description Subject Range Query Range Score Percent Strand
CG30017-PA 324 CG30017-RA 1..321 339..19 1605 100 Minus
Blast to dmel-all-transcript-r6.02.fasta performed on 2015-02-11 04:48:16 has no hits.
Blast to na_all.dmel.RELEASE6 performed 2015-02-11 04:48:13
Subject Length Description Subject Range Query Range Score Percent Strand
2R 25286936 2R 10871266..10871587 19..340 1610 100 Plus
Blast to na_te.dros performed on 2015-02-11 04:48:14 has no hits.

BO04814.3prime Sim4 Records

Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 02:10:33 Download gff for BO04814.3prime
Subject Subject Range Query Range Percent Splice Strand
CG30017-PA 1..324 16..339 99   Minus
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 00:27:09 Download gff for BO04814.3prime
Subject Subject Range Query Range Percent Splice Strand
CG30017-PA 1..324 16..339 99   Minus
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-11 09:35:05 Download gff for BO04814.3prime
Subject Subject Range Query Range Percent Splice Strand
2R 10871260..10871589 12..344 98   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-11 09:35:05 Download gff for BO04814.3prime
Subject Subject Range Query Range Percent Splice Strand
2R 10871260..10871589 12..344 98   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-23 06:13:45 Download gff for BO04814.3prime
Subject Subject Range Query Range Percent Splice Strand
arm_2R 6758765..6759094 12..344 98   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-23 06:13:45 Download gff for BO04814.3prime
Subject Subject Range Query Range Percent Splice Strand
arm_2R 6758765..6759094 12..344 98   Plus

BO04814.5prime Sequence

353 bp (352 high quality bases) assembled on 2005-11-29

> BO04814.5prime
GAAGTTATCAGTCGACATGCAATTTCAGGGCATTTCATTCCGCTTGCGCG
TAGTTGTTGTTCCCGAACCCCAAGTAGATGTTTTTCGCAATGTTTGCGCA
GTTGTGTGGGCATTTGCATTTGTATCTGAGTGCGACTGTTTGAGTCCGGA
TTGCAGGGGTGCGGATGTGTGTGGAAGTGTGAGTCGGCCAACCTGTTCGG
AACTCAAGGAAAATGAGTCAGCAACGCCGGGCCGGGCCGTGCCGGGCCGG
GCTTTCGCATCCATGAGATACATTTCGAGTAGACGCCGTAAAGTGTTTAC
CGAGGACATCGAGGTCTGCGGGGTCCTTCTTCCTTTCGCAAGCTTTCTAG
ACC

BO04814.5prime Blast Records

Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 12:11:45
Subject Length Description Subject Range Query Range Score Percent Strand
CG30017-PA 324 CG30017-RA 1..321 17..337 1605 100 Plus
Blast to dmel-all-transcript-r6.02.fasta performed on 2015-02-13 01:07:46 has no hits.
Blast to na_all.dmel.RELEASE6 performed 2015-02-13 01:07:39
Subject Length Description Subject Range Query Range Score Percent Strand
2R 25286936 2R 10871266..10871587 337..16 1610 100 Minus
Blast to na_te.dros performed on 2015-02-13 01:07:43 has no hits.

BO04814.5prime Sim4 Records

Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 02:10:34 Download gff for BO04814.5prime
Subject Subject Range Query Range Percent Splice Strand
CG30017-PA 1..324 17..340 99   Plus
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 00:27:10 Download gff for BO04814.5prime
Subject Subject Range Query Range Percent Splice Strand
CG30017-PA 1..324 17..340 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-13 03:02:27 Download gff for BO04814.5prime
Subject Subject Range Query Range Percent Splice Strand
2R 10871260..10871589 12..344 98   Minus
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-13 03:02:27 Download gff for BO04814.5prime
Subject Subject Range Query Range Percent Splice Strand
2R 10871260..10871589 12..344 98   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-31 20:07:37 Download gff for BO04814.5prime
Subject Subject Range Query Range Percent Splice Strand
arm_2R 6758765..6759094 12..344 98   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-31 20:07:37 Download gff for BO04814.5prime
Subject Subject Range Query Range Percent Splice Strand
arm_2R 6758765..6759094 12..344 98   Minus

BO04814.complete Sequence

355 bp (355 high quality bases) assembled on 2005-09-08

GenBank Submission: FJ629871

> BO04814.complete
GAAGTTATCAGTCGACATGCAATTTCAGGGCATTTCATTCCGCTTGCGCG
TAGTTGTTGTTCCCGAACCCCAAGTAGATGTTTTTCGCAATGTTTGCGCA
GTTGTGTGGGCATTTGCATTTGTATCTGAGTGCGACTGTTTGAGTCCGGA
TTGCAGGGGTGCGGATGTGTGTGGAAGTGTGAGTCGGCCAACCTGTTCGG
AACTCAAGGAAAATGAGTCAGCAACGCCGGGCCGGGCCGTGCCGGGCCGG
GCTTTCGCATCCATGAGATACATTTCGAGTAGACGCCGTAAAGTGTTTAC
CGAGGACATCGAGGTCTGCGGGGTCCTTCTTCCTTTCGCAAGCTTTCTAG
ACCAT

BO04814.complete Blast Records

Blast to dmel-all-CDS-r6.02.fasta performed on 2014-11-27 15:36:16 has no hits.
Blast to dmel-all-transcript-r6.02.fasta performed on 2014-11-27 15:36:17 has no hits.
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 15:36:15
Subject Length Description Subject Range Query Range Score Percent Strand
2R 25286936 2R 10871266..10871587 337..16 1610 100 Minus
Blast to na_te.dros performed on 2014-11-27 15:36:16 has no hits.

BO04814.complete Sim4 Records

Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-21 22:39:06 Download gff for BO04814.complete
Subject Subject Range Query Range Percent Splice Strand
CG30017-RA 1..324 17..340 99   Plus
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-11 07:07:49 Download gff for BO04814.complete
Subject Subject Range Query Range Percent Splice Strand
CG30017-RA 781..1110 12..344 98   Plus
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 22:39:07 Download gff for BO04814.complete
Subject Subject Range Query Range Percent Splice Strand
CG30017-RA 781..1110 12..344 98   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 16:11:55 Download gff for BO04814.complete
Subject Subject Range Query Range Percent Splice Strand
2R 10871262..10871586 17..339 99   Minus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 16:11:55 Download gff for BO04814.complete
Subject Subject Range Query Range Percent Splice Strand
2R 10871262..10871586 17..339 99   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 18:51:26 Download gff for BO04814.complete
Subject Subject Range Query Range Percent Splice Strand
arm_2R 6758767..6759091 17..339 99   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 18:51:26 Download gff for BO04814.complete
Subject Subject Range Query Range Percent Splice Strand
arm_2R 6758767..6759091 17..339 99   Minus

BO04814.pep Sequence

Translation from 16 to 355

> BO04814.pep
MQFQGISFRLRVVVVPEPQVDVFRNVCAVVWAFAFVSECDCLSPDCRGAD
VCGSVSRPTCSELKENESATPGRAVPGRAFASMRYISSRRRKVFTEDIEV
CGVLLPFASFLDH
Sequence BO04814.pep has no blast hits.