Clone Sequence Records
BO04814.3prime Sequence
353 bp (352 high quality bases) assembled on 2005-12-02
> BO04814.3prime
ATGGTCTAGAAAGCTTGCGAAAGGAAGAAGGACCCCGCAGACCTCGATGT
CCTCGGTAAACACTTTACGGCGTCTACTCGAAATGTATCTCATGGATGCG
AAAGCCCGGCCCGGCACGGCCCGGCCCGGCGTTGCTGACTCATTTTCCTT
GAGTTCCGAACAGGTTGGCCGACTCACACTTCCACACACATCCGCACCCC
TGCAATCCGGACTCAAACAGTCGCACTCAGATACAAATGCAAATGCCCAC
ACAACTGCGCAAACATTGCGAAAAACATCTACTTGGGGTTCGGGAACAAC
AACTACGCGCAAGCGGAATGAAATGCCCTGAAATTGCATGTCGACTGATA
ACT
BO04814.3prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 12:11:44
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG30017-PA | 324 | CG30017-RA | 1..321 | 339..19 | 1605 | 100 | Minus |
Blast to dmel-all-transcript-r6.02.fasta performed on 2015-02-11 04:48:16 has no hits.
Blast to na_all.dmel.RELEASE6 performed 2015-02-11 04:48:13
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
2R | 25286936 | 2R | 10871266..10871587 | 19..340 | 1610 | 100 | Plus |
Blast to na_te.dros performed on 2015-02-11 04:48:14 has no hits.
BO04814.3prime Sim4 Records
Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 02:10:33 Download gff for
BO04814.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG30017-PA | 1..324 | 16..339 | 99 | | Minus |
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 00:27:09 Download gff for
BO04814.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG30017-PA | 1..324 | 16..339 | 99 | | Minus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-11 09:35:05 Download gff for
BO04814.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
2R | 10871260..10871589 | 12..344 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-11 09:35:05 Download gff for
BO04814.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
2R | 10871260..10871589 | 12..344 | 98 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-23 06:13:45 Download gff for
BO04814.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_2R | 6758765..6759094 | 12..344 | 98 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-23 06:13:45 Download gff for
BO04814.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_2R | 6758765..6759094 | 12..344 | 98 | | Plus |
BO04814.5prime Sequence
353 bp (352 high quality bases) assembled on 2005-11-29
> BO04814.5prime
GAAGTTATCAGTCGACATGCAATTTCAGGGCATTTCATTCCGCTTGCGCG
TAGTTGTTGTTCCCGAACCCCAAGTAGATGTTTTTCGCAATGTTTGCGCA
GTTGTGTGGGCATTTGCATTTGTATCTGAGTGCGACTGTTTGAGTCCGGA
TTGCAGGGGTGCGGATGTGTGTGGAAGTGTGAGTCGGCCAACCTGTTCGG
AACTCAAGGAAAATGAGTCAGCAACGCCGGGCCGGGCCGTGCCGGGCCGG
GCTTTCGCATCCATGAGATACATTTCGAGTAGACGCCGTAAAGTGTTTAC
CGAGGACATCGAGGTCTGCGGGGTCCTTCTTCCTTTCGCAAGCTTTCTAG
ACC
BO04814.5prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 12:11:45
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG30017-PA | 324 | CG30017-RA | 1..321 | 17..337 | 1605 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed on 2015-02-13 01:07:46 has no hits.
Blast to na_all.dmel.RELEASE6 performed 2015-02-13 01:07:39
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
2R | 25286936 | 2R | 10871266..10871587 | 337..16 | 1610 | 100 | Minus |
Blast to na_te.dros performed on 2015-02-13 01:07:43 has no hits.
BO04814.5prime Sim4 Records
Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 02:10:34 Download gff for
BO04814.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG30017-PA | 1..324 | 17..340 | 99 | | Plus |
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 00:27:10 Download gff for
BO04814.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG30017-PA | 1..324 | 17..340 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-13 03:02:27 Download gff for
BO04814.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
2R | 10871260..10871589 | 12..344 | 98 | | Minus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-13 03:02:27 Download gff for
BO04814.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
2R | 10871260..10871589 | 12..344 | 98 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-31 20:07:37 Download gff for
BO04814.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_2R | 6758765..6759094 | 12..344 | 98 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-31 20:07:37 Download gff for
BO04814.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_2R | 6758765..6759094 | 12..344 | 98 | | Minus |
BO04814.complete Sequence
355 bp (355 high quality bases) assembled on 2005-09-08
GenBank Submission: FJ629871
> BO04814.complete
GAAGTTATCAGTCGACATGCAATTTCAGGGCATTTCATTCCGCTTGCGCG
TAGTTGTTGTTCCCGAACCCCAAGTAGATGTTTTTCGCAATGTTTGCGCA
GTTGTGTGGGCATTTGCATTTGTATCTGAGTGCGACTGTTTGAGTCCGGA
TTGCAGGGGTGCGGATGTGTGTGGAAGTGTGAGTCGGCCAACCTGTTCGG
AACTCAAGGAAAATGAGTCAGCAACGCCGGGCCGGGCCGTGCCGGGCCGG
GCTTTCGCATCCATGAGATACATTTCGAGTAGACGCCGTAAAGTGTTTAC
CGAGGACATCGAGGTCTGCGGGGTCCTTCTTCCTTTCGCAAGCTTTCTAG
ACCAT
BO04814.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed on 2014-11-27 15:36:16 has no hits.
Blast to dmel-all-transcript-r6.02.fasta performed on 2014-11-27 15:36:17 has no hits.
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 15:36:15
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
2R | 25286936 | 2R | 10871266..10871587 | 337..16 | 1610 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-27 15:36:16 has no hits.
BO04814.complete Sim4 Records
Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-21 22:39:06 Download gff for
BO04814.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG30017-RA | 1..324 | 17..340 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-11 07:07:49 Download gff for
BO04814.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG30017-RA | 781..1110 | 12..344 | 98 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 22:39:07 Download gff for
BO04814.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG30017-RA | 781..1110 | 12..344 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 16:11:55 Download gff for
BO04814.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
2R | 10871262..10871586 | 17..339 | 99 | | Minus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 16:11:55 Download gff for
BO04814.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
2R | 10871262..10871586 | 17..339 | 99 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 18:51:26 Download gff for
BO04814.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_2R | 6758767..6759091 | 17..339 | 99 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 18:51:26 Download gff for
BO04814.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_2R | 6758767..6759091 | 17..339 | 99 | | Minus |
BO04814.pep Sequence
Translation from 16 to 355
> BO04814.pep
MQFQGISFRLRVVVVPEPQVDVFRNVCAVVWAFAFVSECDCLSPDCRGAD
VCGSVSRPTCSELKENESATPGRAVPGRAFASMRYISSRRRKVFTEDIEV
CGVLLPFASFLDH
Sequence BO04814.pep has no blast hits.