Clone Sequence Records
BO04819.3prime Sequence
686 bp (685 high quality bases) assembled on 2005-12-02
> BO04819.3prime
ATGGTCTAGAAAGCTTGCCATTGCGAGCGTTTCCTTGATGATCTTCTTCA
TGGCGTTACCCATGGAGGGTGCAGCCGAGCCCGAGGTGGAGTAGTCAAAC
TTAAACAAATACGGCTGCACGTCCGGAAAGGATGTGTCGAAGATCAGGTC
CAGTTCGCTCTGGCTGGGCGTTTTGGGCACGTAATCGTGCCGATTCATCA
GCTCGGTGATGTATATGACCTTTTCGGTCAGGAGATCGGAGACATTCTCG
CGGCACAGCTGCCTCTCATCCTCGTTCTCGTGCTTGATCAGATCCAGGTG
CACCGTCCACACCTCCCATGGGATCGACTCCTGCGGAAAGGGCCAGCGGT
TCTTCTTTTTCTGAAAGAACTCCAGGCTGATCTGGCCTGAGCCACAGCTC
TCGTTGGAGCGCAGCTTCTCGCTGAACGAGTTGATGGCCCGCTTCACCTT
GTGTGTCAAGCTGTCCGAGGTGCAGCACACGTAGGTGAAGTCGATGAAGT
TGCAATCGACGTCCGTGTAGCCGACCGTGCCAATCGAGTATTGGGCGTCG
CCCGTGTACATGTACTTGCCCAAGCAGCGGTGGAAGAGGACGGTGTGAAA
AATGGTGGCCACCGCCTCGTCCACCTGACGACCCTCCATGGTCAGATCAA
AAACCTGCGAACGCGCGTTCATGTCGACTGATAACT
BO04819.3prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 12:11:49
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG7053-PA | 657 | CG7053-RA | 1..654 | 672..19 | 3270 | 100 | Minus |
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-13 02:12:31
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Atg101-RA | 1850 | CG7053-RA | 231..884 | 672..19 | 3270 | 100 | Minus |
Blast to na_all.dmel.RELEASE6 performed 2015-02-13 02:12:27
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| X | 23542271 | X | 18791898..18792551 | 672..19 | 3270 | 100 | Minus |
Blast to na_te.dros performed on 2015-02-13 02:12:29 has no hits.
BO04819.3prime Sim4 Records
Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 02:10:39 Download gff for
BO04819.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG7053-PA | 1..657 | 16..672 | 99 | | Minus |
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 00:27:17 Download gff for
BO04819.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG7053-PA | 1..657 | 16..672 | 99 | | Minus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-09-01 06:35:14 Download gff for
BO04819.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG7053-RA | 221..884 | 19..686 | 99 | | Minus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-13 03:37:57 Download gff for
BO04819.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Atg101-RA | 221..884 | 19..686 | 99 | | Minus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-13 03:37:57 Download gff for
BO04819.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| X | 18791888..18792551 | 19..686 | 99 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-09-01 06:35:14 Download gff for
BO04819.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_X | 18685921..18686584 | 19..686 | 99 | | Minus |
BO04819.5prime Sequence
686 bp (685 high quality bases) assembled on 2005-11-29
> BO04819.5prime
GAAGTTATCAGTCGACATGAACGCGCGTTCGCAGGTTTTTGATCTGACCA
TGGAGGGTCGTCAGGTGGACGAGGCGGTGGCCACCATTTTTCACACCGTC
CTCTTCCACCGCTGCTTGGGCAAGTACATGTACACGGGCGACGCCCAATA
CTCGATTGGCACGGTCGGCTACACGGACGTCGATTGCAACTTCATCGACT
TCACCTACGTGTGCTGCACCTCGGACAGCTTGACACACAAGGTGAAGCGG
GCCATCAACTCGTTCAGCGAGAAGCTGCGCTCCAACGAGAGCTGTGGCTC
AGGCCAGATCAGCCTGGAGTTCTTTCAGAAAAAGAAGAACCGCTGGCCCT
TTCCGCAGGAGTCGATCCCATGGGAGGTGTGGACGGTGCACCTGGATCTG
ATCAAGCACGAGAACGAGGATGAGAGGCAGCTGTGCCGCGAGAATGTCTC
CGATCTCCTGACCGAAAAGGTCATATACATCACCGAGCTGATGAATCGGC
ACGATTACGTGCCCAAAACGCCCAGCCAGAGCGAACTGGACCTGATCTTC
GACACATCCTTTCCGGACGTGCAGCCGTATTTGTTTAAGTTTGACTACTC
CACCTCGGGCTCGGCTGCACCCTCCATGGGTAACGCCATGAAGAAGATCA
TCAAGGAAACGCTCGCAATGGCAAGCTTTCTAGACC
BO04819.5prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 12:11:51
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG7053-PA | 657 | CG7053-RA | 1..654 | 17..670 | 3270 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-09 18:40:23
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Atg101-RA | 1850 | CG7053-RA | 231..884 | 17..670 | 3270 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2015-02-09 18:40:17
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| X | 23542271 | X | 18791898..18792551 | 17..670 | 3270 | 100 | Plus |
Blast to na_te.dros performed on 2015-02-09 18:40:20 has no hits.
BO04819.5prime Sim4 Records
Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 02:10:40 Download gff for
BO04819.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG7053-PA | 1..657 | 17..673 | 99 | | Plus |
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 00:27:19 Download gff for
BO04819.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG7053-PA | 1..657 | 17..673 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-13 03:59:47 Download gff for
BO04819.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG7053-RA | 219..884 | 1..670 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-09 21:13:38 Download gff for
BO04819.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Atg101-RA | 219..884 | 1..670 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-09 21:13:38 Download gff for
BO04819.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| X | 18791886..18792551 | 1..670 | 99 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-13 03:59:47 Download gff for
BO04819.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_X | 18685919..18686584 | 1..670 | 99 | | Plus |
BO04819.complete Sequence
688 bp (688 high quality bases) assembled on 2005-09-08
GenBank Submission: FJ629874
> BO04819.complete
GAAGTTATCAGTCGACATGAACGCGCGTTCGCAGGTTTTTGATCTGACCA
TGGAGGGTCGTCAGGTGGACGAGGCGGTGGCCACCATTTTTCACACCGTC
CTCTTCCACCGCTGCTTGGGCAAGTACATGTACACGGGCGACGCCCAATA
CTCGATTGGCACGGTCGGCTACACGGACGTCGATTGCAACTTCATCGACT
TCACCTACGTGTGCTGCACCTCGGACAGCTTGACACACAAGGTGAAGCGG
GCCATCAACTCGTTCAGCGAGAAGCTGCGCTCCAACGAGAGCTGTGGCTC
AGGCCAGATCAGCCTGGAGTTCTTTCAGAAAAAGAAGAACCGCTGGCCCT
TTCCGCAGGAGTCGATCCCATGGGAGGTGTGGACGGTGCACCTGGATCTG
ATCAAGCACGAGAACGAGGATGAGAGGCAGCTGTGCCGCGAGAATGTCTC
CGATCTCCTGACCGAAAAGGTCATATACATCACCGAGCTGATGAATCGGC
ACGATTACGTGCCCAAAACGCCCAGCCAGAGCGAACTGGACCTGATCTTC
GACACATCCTTTCCGGACGTGCAGCCGTATTTGTTTAAGTTTGACTACTC
CACCTCGGGCTCGGCTGCACCCTCCATGGGTAACGCCATGAAGAAGATCA
TCAAGGAAACGCTCGCAATGGCAAGCTTTCTAGACCAT
BO04819.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-27 01:19:44
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Atg101-RA | 657 | CG7053-PA | 1..654 | 17..670 | 3270 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 01:19:45
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Atg101-RA | 1850 | CG7053-RA | 231..884 | 17..670 | 3270 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 01:19:41
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| X | 23542271 | X | 18791898..18792551 | 17..670 | 3270 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-27 01:19:42 has no hits.
BO04819.complete Sim4 Records
Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-21 22:39:12 Download gff for
BO04819.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG7053-RA | 1..657 | 17..673 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-11 07:07:56 Download gff for
BO04819.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG7053-RA | 219..884 | 1..670 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 04:51:10 Download gff for
BO04819.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG7053-RA | 231..884 | 17..672 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 22:39:12 Download gff for
BO04819.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG7053-RA | 219..884 | 1..670 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 02:23:19 Download gff for
BO04819.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Atg101-RA | 231..884 | 17..672 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 02:23:19 Download gff for
BO04819.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| X | 18791898..18792551 | 17..672 | 99 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 04:51:10 Download gff for
BO04819.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_X | 18685931..18686584 | 17..672 | 99 | | Plus |
BO04819.pep Sequence
Translation from 16 to 688
> BO04819.pep
MNARSQVFDLTMEGRQVDEAVATIFHTVLFHRCLGKYMYTGDAQYSIGTV
GYTDVDCNFIDFTYVCCTSDSLTHKVKRAINSFSEKLRSNESCGSGQISL
EFFQKKKNRWPFPQESIPWEVWTVHLDLIKHENEDERQLCRENVSDLLTE
KVIYITELMNRHDYVPKTPSQSELDLIFDTSFPDVQPYLFKFDYSTSGSA
APSMGNAMKKIIKETLAMASFLDH
BO04819.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 19:33:35
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Atg101-PA | 218 | CG7053-PA | 1..218 | 1..218 | 1160 | 100 | Plus |
