Clone Sequence Records
BO04826.3prime Sequence
954 bp (845 high quality bases) assembled on 2005-12-02
> BO04826.3prime
ATGGTCTAGAAAGCTTGCGTACAGTCCACAGCCGCGCAGGTTGTTTGCTA
TGATGACATCGGTGACAGCATCGAATACAAACTGAATGTTATTGGTATCT
GTGGCACACGTCATGTGGCAGTAGATTTCTTTTGAGGTTGATTTGTTTTT
CGCTTCAAATTGAGCCTGAATGTAAGCAGCCGCCTCGCCGTACTCCTGTC
CACCTGTGTATTCGGGGAAGCAAATCGTCAGGGGACTCTTGCGAATCTTC
TCCTCGAACAAATCCTTCTTGTTCAGGAATAGAATAATCGAGGTGTCCGT
GAACCATTTGTTGTTACAGATCGAGTCAAACAGTTTCAGCGACTCTTGCA
TGCGGTTCGTGGTTTCATCCTCATGCAAGACTTGATCGTACTCGGACATG
GCCACGCAGAAAATGATCGCCGTGACATCTTCGAAGCAGTGTATCCATTT
CTTACGTTCCGAGCGCTGACCGCCCACGTCAAACAATTTAAAGTTGAGGT
TTTTGAAGGAGAAGTGTACCTCAACGATGCCAGTGGTCTTGACGCGAGTG
CGCAAGATATCTTGTTCAGTTGGCTGGTAATCCTTGGCGCCTAACCGATC
CAAATCGTCCAGGAAATATTTTGCGGAATCGTTTAGTTGGTATTCGTTGC
TGCGCGAGAAGCACTCCTGGACACCGGCGTCCTGCCAGAGGCGTTTCATG
GCGGCCAGCAGCTCCTCCGAGAAGGGCTCGGTGTCGTGCATGCGTTGGCA
TACGTCGAACACCATCTTGGCATCGCTCTCCCGCTCGTTATTGCTGTACT
GAATACTTAGGGTTGGCATCGCGCGCAATATTGCAACTAATGATTGTATT
GTGTTGCTGTAGACAACCGGTCGATATTGTTTAAAGTCCTCAGCAGTGAA
GCCGCTCTCGTGAATGATTTTCATCTGTTTGACTATTGTGCTCTTGCCCG
ACTC
BO04826.3prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 12:11:57
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG2204-PB | 1065 | G-oalpha47A-RB | 127..1062 | 954..19 | 4630 | 99.7 | Minus |
CG2204-PC | 1065 | G-oalpha47A-RC | 127..1062 | 954..19 | 4630 | 99.7 | Minus |
CG2204-PA | 1065 | G-oalpha47A-RA | 127..1062 | 954..19 | 4630 | 99.7 | Minus |
CG2204-PD | 1065 | G-oalpha47A-RD | 127..1062 | 954..19 | 4630 | 99.7 | Minus |
CG2204-PE | 1065 | G-oalpha47A-RE | 127..1062 | 954..19 | 4630 | 99.7 | Minus |
CG2204-PF | 1065 | G-oalpha47A-RF | 127..1062 | 954..19 | 4630 | 99.7 | Minus |
CG2204-PG | 1065 | G-oalpha47A-RG | 127..1062 | 954..19 | 4630 | 99.7 | Minus |
CG2204-PH | 1065 | G-oalpha47A-RH | 127..1062 | 954..19 | 4630 | 99.7 | Minus |
CG2204-PI | 1065 | G-oalpha47A-RI | 127..1062 | 954..19 | 4630 | 99.7 | Minus |
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-04 19:29:31
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Galphao-RI | 5457 | CG2204-RI | 518..1453 | 954..19 | 4650 | 99.8 | Minus |
Galphao-RH | 2194 | CG2204-RH | 270..1205 | 954..19 | 4650 | 99.8 | Minus |
Galphao-RG | 2322 | CG2204-RG | 398..1333 | 954..19 | 4650 | 99.8 | Minus |
Blast to na_all.dmel.RELEASE6 performed 2015-02-04 19:29:25
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
2R | 25286936 | 2R | 10461510..10461697 | 206..19 | 940 | 100 | Minus |
2R | 25286936 | 2R | 10448207..10448383 | 954..778 | 855 | 98.9 | Minus |
2R | 25286936 | 2R | 10448470..10448632 | 779..617 | 815 | 100 | Minus |
2R | 25286936 | 2R | 10461289..10461446 | 358..201 | 790 | 100 | Minus |
2R | 25286936 | 2R | 10461096..10461225 | 487..358 | 650 | 100 | Minus |
2R | 25286936 | 2R | 10460903..10461031 | 616..488 | 645 | 100 | Minus |
3L | 28110227 | 3L | 6973588..6973731 | 202..345 | 225 | 77.1 | Plus |
Blast to na_te.dros performed on 2015-02-04 19:29:28 has no hits.
BO04826.3prime Sim4 Records
Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 02:10:48 Download gff for
BO04826.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG2204-PF | 127..1065 | 15..954 | 99 | | Minus |
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 00:27:31 Download gff for
BO04826.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG2204-PI | 127..1065 | 15..954 | 99 | | Minus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-10 21:17:46 Download gff for
BO04826.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
Galphao-RG | 398..1337 | 14..954 | 99 | | Minus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-04 21:34:55 Download gff for
BO04826.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
Galphao-RG | 398..1337 | 14..954 | 99 | | Minus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-04 21:34:55 Download gff for
BO04826.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
2R | 10461096..10461225 | 358..487 | 100 | -> | Minus |
2R | 10461290..10461443 | 204..357 | 100 | -> | Minus |
2R | 10460903..10461031 | 488..616 | 100 | -> | Minus |
2R | 10448207..10448383 | 778..954 | 98 | -> | Minus |
2R | 10448472..10448632 | 617..777 | 100 | -> | Minus |
2R | 10461513..10461701 | 14..203 | 98 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-10 21:17:46 Download gff for
BO04826.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_2R | 6348795..6348948 | 204..357 | 100 | -> | Minus |
arm_2R | 6348408..6348536 | 488..616 | 100 | -> | Minus |
arm_2R | 6348601..6348730 | 358..487 | 100 | -> | Minus |
arm_2R | 6335712..6335888 | 778..954 | 98 | -> | Minus |
arm_2R | 6335977..6336137 | 617..777 | 100 | -> | Minus |
arm_2R | 6349018..6349206 | 14..203 | 98 | | Minus |
BO04826.5prime Sequence
851 bp (758 high quality bases) assembled on 2005-11-29
> BO04826.5prime
GAAGTTATCAGTCGACATGGGCTGCGCACAGTCTGCCGAGGAGCGAGCCG
CAGCCGCCAGGAGTCGCCTCATCGAGCGCAATCTCAAGGAGGACGGCATA
CAGGCGGCAAAGGACATCAAACTCCTGCTGCTGGGTGCCGGTGAGTCGGG
CAAGAGCACAATAGTCAAACAGATGAAAATCATTCACGAGAGCGGCTTCA
CTGCTGAGGACTTTAAACAATATCGACCGGTTGTCTACAGCAACACAATA
CAATCATTAGTTGCAATATTGCGCGCGATGCCAACCCTAAGTATTCAGTA
CAGCAATAACGAGCGGGAGAGCGATGCCAAGATGGTGTTCGACGTATGCC
AACGCATGCACGACACCGAGCCCTTCTCGGAGGAGCTGCTGGCCGCCATG
AAACGCCTCTGGCAGGACGCCGGTGTCCAGGAGTGCTTCTCGCGCAGCAA
CGAATACCAACTAAACGATTCCGCAAAATATTTCCTGGACGATTTGGATC
GGTTAGGCGCCAAGGATTACCAGCCAACTGAACAAGATATCTTGCGCACT
CGCGTCAAGACCACTGGCATCGTTGAGGTACACTTCTCCTTCAAAAACCT
CAACTTTAAATTGTTTGACGTGGGCGGTCAGCGCTCGGAACGTAAGAAAT
GGATACACTGCTTCGAAGATGTCACGGCGATCATTTTCTGCGTGGCCATG
TCCGAGTACGATCAAGTCTTGCATGAGGATGAAACCACGAACCGCATGCA
AGAGTCGCTGAAACTGTTTGACTCGATCTGTAACAACAAATGGTTCACGG
ACACCTCGATTATTCTATTCCTGAACAAGAAGGATTTGTTCGAGGAGAAG
A
BO04826.5prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 12:11:57
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG2204-PC | 1065 | G-oalpha47A-RC | 1..835 | 17..851 | 4125 | 99.7 | Plus |
CG2204-PA | 1065 | G-oalpha47A-RA | 1..835 | 17..851 | 4125 | 99.7 | Plus |
CG2204-PI | 1065 | G-oalpha47A-RI | 1..835 | 17..851 | 4125 | 99.7 | Plus |
CG2204-PB | 1065 | G-oalpha47A-RB | 64..835 | 80..851 | 3660 | 98.9 | Plus |
CG2204-PD | 1065 | G-oalpha47A-RD | 64..835 | 80..851 | 3660 | 98.9 | Plus |
CG2204-PE | 1065 | G-oalpha47A-RE | 64..835 | 80..851 | 3660 | 98.9 | Plus |
CG2204-PF | 1065 | G-oalpha47A-RF | 64..835 | 80..851 | 3660 | 98.9 | Plus |
CG2204-PG | 1065 | G-oalpha47A-RG | 64..835 | 80..851 | 3660 | 98.9 | Plus |
CG2204-PH | 1065 | G-oalpha47A-RH | 64..835 | 80..851 | 3660 | 98.9 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-11 04:48:22
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Galphao-RI | 5457 | CG2204-RI | 391..1226 | 16..851 | 4150 | 99.8 | Plus |
Galphao-RA | 3462 | CG2204-RA | 379..1214 | 16..851 | 4150 | 99.8 | Plus |
Galphao-RC | 2367 | CG2204-RC | 316..1151 | 16..851 | 4150 | 99.8 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2015-02-11 04:48:18
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
2R | 25286936 | 2R | 10448198..10448383 | 134..319 | 900 | 98.9 | Plus |
2R | 25286936 | 2R | 10448470..10448632 | 318..480 | 815 | 100 | Plus |
2R | 25286936 | 2R | 10461096..10461225 | 610..739 | 650 | 100 | Plus |
2R | 25286936 | 2R | 10460903..10461031 | 481..609 | 645 | 100 | Plus |
2R | 25286936 | 2R | 10445506..10445627 | 16..137 | 610 | 100 | Plus |
2R | 25286936 | 2R | 10461289..10461401 | 739..851 | 565 | 100 | Plus |
2R | 25286936 | 2R | 10439577..10439633 | 80..136 | 195 | 89.5 | Plus |
3L | 28110227 | 3L | 6973632..6973731 | 851..752 | 185 | 79 | Minus |
Blast to na_te.dros performed on 2015-02-11 04:48:20 has no hits.
BO04826.5prime Sim4 Records
Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 02:10:49 Download gff for
BO04826.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG2204-PI | 1..834 | 17..850 | 99 | | Plus |
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 00:27:32 Download gff for
BO04826.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG2204-PI | 1..834 | 17..850 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-23 06:13:46 Download gff for
BO04826.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
Galphao-RC | 316..1150 | 16..850 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-11 09:35:22 Download gff for
BO04826.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
Galphao-RC | 316..1150 | 16..850 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-11 09:35:22 Download gff for
BO04826.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
2R | 10445506..10445624 | 16..134 | 100 | -> | Plus |
2R | 10448199..10448383 | 135..319 | 98 | -> | Plus |
2R | 10448472..10448632 | 320..480 | 100 | -> | Plus |
2R | 10460903..10461031 | 481..609 | 100 | -> | Plus |
2R | 10461096..10461225 | 610..739 | 100 | -> | Plus |
2R | 10461290..10461400 | 740..850 | 100 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-23 06:13:46 Download gff for
BO04826.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_2R | 6333011..6333129 | 16..134 | 100 | -> | Plus |
arm_2R | 6335704..6335888 | 135..319 | 98 | -> | Plus |
arm_2R | 6335977..6336137 | 320..480 | 100 | -> | Plus |
arm_2R | 6348408..6348536 | 481..609 | 100 | -> | Plus |
arm_2R | 6348601..6348730 | 610..739 | 100 | -> | Plus |
arm_2R | 6348795..6348905 | 740..850 | 100 | | Plus |
BO04826.complete Sequence
1096 bp (1096 high quality bases) assembled on 2005-09-08
GenBank Submission: FJ629878
> BO04826.complete
GAAGTTATCAGTCGACATGGGCTGCGCACAGTCTGCCGAGGAGCGAGCCG
CAGCCGCCAGGAGTCGCCTCATCGAGCGCAATCTCAAGGAGGACGGCATA
CAGGCGGCAAAGGACATCAAACTCCTGCTGCTGGGTGCCGGTGAGTCGGG
CAAGAGCACAATAGTCAAACAGATGAAAATCATTCACGAGAGCGGCTTCA
CTGCTGAGGACTTTAAACAATATCGACCGGTTGTCTACAGCAACACAATA
CAATCATTAGTTGCAATATTGCGCGCGATGCCAACCCTAAGTATTCAGTA
CAGCAATAACGAGCGGGAGAGCGATGCCAAGATGGTGTTCGACGTATGCC
AACGCATGCACGACACCGAGCCCTTCTCGGAGGAGCTGCTGGCCGCCATG
AAACGCCTCTGGCAGGACGCCGGTGTCCAGGAGTGCTTCTCGCGCAGCAA
CGAATACCAACTAAACGATTCCGCAAAATATTTCCTGGACGATTTGGATC
GGTTAGGCGCCAAGGATTACCAGCCAACTGAACAAGATATCTTGCGCACT
CGCGTCAAGACCACTGGCATCGTTGAGGTACACTTCTCCTTCAAAAACCT
CAACTTTAAATTGTTTGACGTGGGCGGTCAGCGCTCGGAACGTAAGAAAT
GGATACACTGCTTCGAAGATGTCACGGCGATCATTTTCTGCGTGGCCATG
TCCGAGTACGATCAAGTCTTGCATGAGGATGAAACCACGAACCGCATGCA
AGAGTCGCTGAAACTGTTTGACTCGATCTGTAACAACAAATGGTTCACGG
ACACCTCGATTATTCTATTCCTGAACAAGAAGGATTTGTTCGAGGAGAAG
ATTCGCAAGAGTCCCCTGACGATTTGCTTCCCCGAATACACAGGTGGACA
GGAGTACGGCGAGGCGGCTGCTTACATTCAGGCTCAATTTGAAGCGAAAA
ACAAATCAACCTCAAAAGAAATCTACTGCCACATGACGTGTGCCACAGAT
ACCAATAACATTCAGTTTGTATTCGATGCTGTCACCGATGTCATCATAGC
AAACAACCTGCGCGGCTGTGGACTGTACGCAAGCTTTCTAGACCAT
BO04826.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 08:35:46
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Galphao-RI | 1065 | CG2204-PI | 1..1062 | 17..1078 | 5280 | 99.8 | Plus |
Galphao-RA | 1065 | CG2204-PA | 1..1062 | 17..1078 | 5280 | 99.8 | Plus |
Galphao-RC | 1065 | CG2204-PC | 1..1062 | 17..1078 | 5280 | 99.8 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 08:35:47
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Galphao-RI | 5457 | CG2204-RI | 391..1453 | 16..1078 | 5285 | 99.8 | Plus |
Galphao-RA | 3462 | CG2204-RA | 379..1441 | 16..1078 | 5285 | 99.8 | Plus |
Galphao-RC | 2367 | CG2204-RC | 316..1378 | 16..1078 | 5285 | 99.8 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 08:35:44
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
2R | 25286936 | 2R | 10461510..10461697 | 891..1078 | 940 | 100 | Plus |
2R | 25286936 | 2R | 10448198..10448383 | 134..319 | 900 | 98.9 | Plus |
2R | 25286936 | 2R | 10448470..10448632 | 318..480 | 815 | 100 | Plus |
2R | 25286936 | 2R | 10461289..10461446 | 739..896 | 790 | 100 | Plus |
2R | 25286936 | 2R | 10461096..10461225 | 610..739 | 650 | 100 | Plus |
2R | 25286936 | 2R | 10460903..10461031 | 481..609 | 645 | 100 | Plus |
2R | 25286936 | 2R | 10445506..10445627 | 16..137 | 610 | 100 | Plus |
3L | 28110227 | 3L | 6973588..6973731 | 895..752 | 225 | 77.1 | Minus |
2R | 25286936 | 2R | 10439577..10439633 | 80..136 | 195 | 89.5 | Plus |
Blast to na_te.dros performed on 2014-11-28 08:35:45 has no hits.
BO04826.complete Sim4 Records
Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-21 22:38:55 Download gff for
BO04826.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
G-oalpha47A-RI | 1..1065 | 17..1082 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-07-28 16:58:47 Download gff for
BO04826.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
G-oalpha47A-RI | 111..1172 | 17..1080 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:23:31 Download gff for
BO04826.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
Galphao-RC | 317..1378 | 17..1080 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 22:38:55 Download gff for
BO04826.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
G-oalpha47A-RI | 110..1176 | 16..1083 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 09:21:15 Download gff for
BO04826.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
Galphao-RC | 317..1378 | 17..1080 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 09:21:15 Download gff for
BO04826.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
2R | 10461290..10461443 | 740..893 | 100 | -> | Plus |
2R | 10448199..10448383 | 135..319 | 98 | -> | Plus |
2R | 10448472..10448632 | 320..480 | 100 | -> | Plus |
2R | 10460903..10461031 | 481..609 | 100 | -> | Plus |
2R | 10461096..10461225 | 610..739 | 100 | -> | Plus |
2R | 10445507..10445624 | 17..134 | 100 | -> | Plus |
2R | 10461513..10461697 | 894..1080 | 98 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:23:31 Download gff for
BO04826.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_2R | 6333012..6333129 | 17..134 | 100 | -> | Plus |
arm_2R | 6335704..6335888 | 135..319 | 98 | -> | Plus |
arm_2R | 6335977..6336137 | 320..480 | 100 | -> | Plus |
arm_2R | 6348408..6348536 | 481..609 | 100 | -> | Plus |
arm_2R | 6348601..6348730 | 610..739 | 100 | -> | Plus |
arm_2R | 6348795..6348948 | 740..893 | 100 | -> | Plus |
arm_2R | 6349018..6349202 | 894..1080 | 98 | | Plus |
BO04826.pep Sequence
Translation from 16 to 1096
> BO04826.pep
MGCAQSAEERAAAARSRLIERNLKEDGIQAAKDIKLLLLGAGESGKSTIV
KQMKIIHESGFTAEDFKQYRPVVYSNTIQSLVAILRAMPTLSIQYSNNER
ESDAKMVFDVCQRMHDTEPFSEELLAAMKRLWQDAGVQECFSRSNEYQLN
DSAKYFLDDLDRLGAKDYQPTEQDILRTRVKTTGIVEVHFSFKNLNFKLF
DVGGQRSERKKWIHCFEDVTAIIFCVAMSEYDQVLHEDETTNRMQESLKL
FDSICNNKWFTDTSIILFLNKKDLFEEKIRKSPLTICFPEYTGGQEYGEA
AAYIQAQFEAKNKSTSKEIYCHMTCATDTNNIQFVFDAVTDVIIANNLRG
CGLYASFLDH
BO04826.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 19:34:22
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Galphao-PI | 354 | CG2204-PI | 1..354 | 1..354 | 1838 | 100 | Plus |
Galphao-PA | 354 | CG2204-PA | 1..354 | 1..354 | 1838 | 100 | Plus |
Galphao-PC | 354 | CG2204-PC | 1..354 | 1..354 | 1838 | 100 | Plus |
Galphao-PH | 354 | CG2204-PH | 1..354 | 1..354 | 1806 | 98 | Plus |
Galphao-PG | 354 | CG2204-PG | 1..354 | 1..354 | 1806 | 98 | Plus |