Clone BO04826 Report

Search the DGRC for BO04826

Clone and Library Details

Library:BO
Tissue Source:D. melanogaster
Created by:Joe Carlson
Date Registered:2004-06-03
Comments:Infusion clones with open reading frames
Original Plate Number:48
Well:26
Vector:pDNR-Dual
Associated Gene/TranscriptGalphao-RA
Protein status:BO04826.pep: validated full length
Sequenced Size:1096

Clone Sequence Records

BO04826.3prime Sequence

954 bp (845 high quality bases) assembled on 2005-12-02

> BO04826.3prime
ATGGTCTAGAAAGCTTGCGTACAGTCCACAGCCGCGCAGGTTGTTTGCTA
TGATGACATCGGTGACAGCATCGAATACAAACTGAATGTTATTGGTATCT
GTGGCACACGTCATGTGGCAGTAGATTTCTTTTGAGGTTGATTTGTTTTT
CGCTTCAAATTGAGCCTGAATGTAAGCAGCCGCCTCGCCGTACTCCTGTC
CACCTGTGTATTCGGGGAAGCAAATCGTCAGGGGACTCTTGCGAATCTTC
TCCTCGAACAAATCCTTCTTGTTCAGGAATAGAATAATCGAGGTGTCCGT
GAACCATTTGTTGTTACAGATCGAGTCAAACAGTTTCAGCGACTCTTGCA
TGCGGTTCGTGGTTTCATCCTCATGCAAGACTTGATCGTACTCGGACATG
GCCACGCAGAAAATGATCGCCGTGACATCTTCGAAGCAGTGTATCCATTT
CTTACGTTCCGAGCGCTGACCGCCCACGTCAAACAATTTAAAGTTGAGGT
TTTTGAAGGAGAAGTGTACCTCAACGATGCCAGTGGTCTTGACGCGAGTG
CGCAAGATATCTTGTTCAGTTGGCTGGTAATCCTTGGCGCCTAACCGATC
CAAATCGTCCAGGAAATATTTTGCGGAATCGTTTAGTTGGTATTCGTTGC
TGCGCGAGAAGCACTCCTGGACACCGGCGTCCTGCCAGAGGCGTTTCATG
GCGGCCAGCAGCTCCTCCGAGAAGGGCTCGGTGTCGTGCATGCGTTGGCA
TACGTCGAACACCATCTTGGCATCGCTCTCCCGCTCGTTATTGCTGTACT
GAATACTTAGGGTTGGCATCGCGCGCAATATTGCAACTAATGATTGTATT
GTGTTGCTGTAGACAACCGGTCGATATTGTTTAAAGTCCTCAGCAGTGAA
GCCGCTCTCGTGAATGATTTTCATCTGTTTGACTATTGTGCTCTTGCCCG
ACTC

BO04826.3prime Blast Records

Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 12:11:57
Subject Length Description Subject Range Query Range Score Percent Strand
CG2204-PB 1065 G-oalpha47A-RB 127..1062 954..19 4630 99.7 Minus
CG2204-PC 1065 G-oalpha47A-RC 127..1062 954..19 4630 99.7 Minus
CG2204-PA 1065 G-oalpha47A-RA 127..1062 954..19 4630 99.7 Minus
CG2204-PD 1065 G-oalpha47A-RD 127..1062 954..19 4630 99.7 Minus
CG2204-PE 1065 G-oalpha47A-RE 127..1062 954..19 4630 99.7 Minus
CG2204-PF 1065 G-oalpha47A-RF 127..1062 954..19 4630 99.7 Minus
CG2204-PG 1065 G-oalpha47A-RG 127..1062 954..19 4630 99.7 Minus
CG2204-PH 1065 G-oalpha47A-RH 127..1062 954..19 4630 99.7 Minus
CG2204-PI 1065 G-oalpha47A-RI 127..1062 954..19 4630 99.7 Minus
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-04 19:29:31
Subject Length Description Subject Range Query Range Score Percent Strand
Galphao-RI 5457 CG2204-RI 518..1453 954..19 4650 99.8 Minus
Galphao-RH 2194 CG2204-RH 270..1205 954..19 4650 99.8 Minus
Galphao-RG 2322 CG2204-RG 398..1333 954..19 4650 99.8 Minus
Blast to na_all.dmel.RELEASE6 performed 2015-02-04 19:29:25
Subject Length Description Subject Range Query Range Score Percent Strand
2R 25286936 2R 10461510..10461697 206..19 940 100 Minus
2R 25286936 2R 10448207..10448383 954..778 855 98.9 Minus
2R 25286936 2R 10448470..10448632 779..617 815 100 Minus
2R 25286936 2R 10461289..10461446 358..201 790 100 Minus
2R 25286936 2R 10461096..10461225 487..358 650 100 Minus
2R 25286936 2R 10460903..10461031 616..488 645 100 Minus
3L 28110227 3L 6973588..6973731 202..345 225 77.1 Plus
Blast to na_te.dros performed on 2015-02-04 19:29:28 has no hits.

BO04826.3prime Sim4 Records

Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 02:10:48 Download gff for BO04826.3prime
Subject Subject Range Query Range Percent Splice Strand
CG2204-PF 127..1065 15..954 99   Minus
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 00:27:31 Download gff for BO04826.3prime
Subject Subject Range Query Range Percent Splice Strand
CG2204-PI 127..1065 15..954 99   Minus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-10 21:17:46 Download gff for BO04826.3prime
Subject Subject Range Query Range Percent Splice Strand
Galphao-RG 398..1337 14..954 99   Minus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-04 21:34:55 Download gff for BO04826.3prime
Subject Subject Range Query Range Percent Splice Strand
Galphao-RG 398..1337 14..954 99   Minus
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-04 21:34:55 Download gff for BO04826.3prime
Subject Subject Range Query Range Percent Splice Strand
2R 10461096..10461225 358..487 100 -> Minus
2R 10461290..10461443 204..357 100 -> Minus
2R 10460903..10461031 488..616 100 -> Minus
2R 10448207..10448383 778..954 98 -> Minus
2R 10448472..10448632 617..777 100 -> Minus
2R 10461513..10461701 14..203 98   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-10 21:17:46 Download gff for BO04826.3prime
Subject Subject Range Query Range Percent Splice Strand
arm_2R 6348795..6348948 204..357 100 -> Minus
arm_2R 6348408..6348536 488..616 100 -> Minus
arm_2R 6348601..6348730 358..487 100 -> Minus
arm_2R 6335712..6335888 778..954 98 -> Minus
arm_2R 6335977..6336137 617..777 100 -> Minus
arm_2R 6349018..6349206 14..203 98   Minus

BO04826.5prime Sequence

851 bp (758 high quality bases) assembled on 2005-11-29

> BO04826.5prime
GAAGTTATCAGTCGACATGGGCTGCGCACAGTCTGCCGAGGAGCGAGCCG
CAGCCGCCAGGAGTCGCCTCATCGAGCGCAATCTCAAGGAGGACGGCATA
CAGGCGGCAAAGGACATCAAACTCCTGCTGCTGGGTGCCGGTGAGTCGGG
CAAGAGCACAATAGTCAAACAGATGAAAATCATTCACGAGAGCGGCTTCA
CTGCTGAGGACTTTAAACAATATCGACCGGTTGTCTACAGCAACACAATA
CAATCATTAGTTGCAATATTGCGCGCGATGCCAACCCTAAGTATTCAGTA
CAGCAATAACGAGCGGGAGAGCGATGCCAAGATGGTGTTCGACGTATGCC
AACGCATGCACGACACCGAGCCCTTCTCGGAGGAGCTGCTGGCCGCCATG
AAACGCCTCTGGCAGGACGCCGGTGTCCAGGAGTGCTTCTCGCGCAGCAA
CGAATACCAACTAAACGATTCCGCAAAATATTTCCTGGACGATTTGGATC
GGTTAGGCGCCAAGGATTACCAGCCAACTGAACAAGATATCTTGCGCACT
CGCGTCAAGACCACTGGCATCGTTGAGGTACACTTCTCCTTCAAAAACCT
CAACTTTAAATTGTTTGACGTGGGCGGTCAGCGCTCGGAACGTAAGAAAT
GGATACACTGCTTCGAAGATGTCACGGCGATCATTTTCTGCGTGGCCATG
TCCGAGTACGATCAAGTCTTGCATGAGGATGAAACCACGAACCGCATGCA
AGAGTCGCTGAAACTGTTTGACTCGATCTGTAACAACAAATGGTTCACGG
ACACCTCGATTATTCTATTCCTGAACAAGAAGGATTTGTTCGAGGAGAAG
A

BO04826.5prime Blast Records

Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 12:11:57
Subject Length Description Subject Range Query Range Score Percent Strand
CG2204-PC 1065 G-oalpha47A-RC 1..835 17..851 4125 99.7 Plus
CG2204-PA 1065 G-oalpha47A-RA 1..835 17..851 4125 99.7 Plus
CG2204-PI 1065 G-oalpha47A-RI 1..835 17..851 4125 99.7 Plus
CG2204-PB 1065 G-oalpha47A-RB 64..835 80..851 3660 98.9 Plus
CG2204-PD 1065 G-oalpha47A-RD 64..835 80..851 3660 98.9 Plus
CG2204-PE 1065 G-oalpha47A-RE 64..835 80..851 3660 98.9 Plus
CG2204-PF 1065 G-oalpha47A-RF 64..835 80..851 3660 98.9 Plus
CG2204-PG 1065 G-oalpha47A-RG 64..835 80..851 3660 98.9 Plus
CG2204-PH 1065 G-oalpha47A-RH 64..835 80..851 3660 98.9 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-11 04:48:22
Subject Length Description Subject Range Query Range Score Percent Strand
Galphao-RI 5457 CG2204-RI 391..1226 16..851 4150 99.8 Plus
Galphao-RA 3462 CG2204-RA 379..1214 16..851 4150 99.8 Plus
Galphao-RC 2367 CG2204-RC 316..1151 16..851 4150 99.8 Plus
Blast to na_all.dmel.RELEASE6 performed 2015-02-11 04:48:18
Subject Length Description Subject Range Query Range Score Percent Strand
2R 25286936 2R 10448198..10448383 134..319 900 98.9 Plus
2R 25286936 2R 10448470..10448632 318..480 815 100 Plus
2R 25286936 2R 10461096..10461225 610..739 650 100 Plus
2R 25286936 2R 10460903..10461031 481..609 645 100 Plus
2R 25286936 2R 10445506..10445627 16..137 610 100 Plus
2R 25286936 2R 10461289..10461401 739..851 565 100 Plus
2R 25286936 2R 10439577..10439633 80..136 195 89.5 Plus
3L 28110227 3L 6973632..6973731 851..752 185 79 Minus
Blast to na_te.dros performed on 2015-02-11 04:48:20 has no hits.

BO04826.5prime Sim4 Records

Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 02:10:49 Download gff for BO04826.5prime
Subject Subject Range Query Range Percent Splice Strand
CG2204-PI 1..834 17..850 99   Plus
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 00:27:32 Download gff for BO04826.5prime
Subject Subject Range Query Range Percent Splice Strand
CG2204-PI 1..834 17..850 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-23 06:13:46 Download gff for BO04826.5prime
Subject Subject Range Query Range Percent Splice Strand
Galphao-RC 316..1150 16..850 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-11 09:35:22 Download gff for BO04826.5prime
Subject Subject Range Query Range Percent Splice Strand
Galphao-RC 316..1150 16..850 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-11 09:35:22 Download gff for BO04826.5prime
Subject Subject Range Query Range Percent Splice Strand
2R 10445506..10445624 16..134 100 -> Plus
2R 10448199..10448383 135..319 98 -> Plus
2R 10448472..10448632 320..480 100 -> Plus
2R 10460903..10461031 481..609 100 -> Plus
2R 10461096..10461225 610..739 100 -> Plus
2R 10461290..10461400 740..850 100   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-23 06:13:46 Download gff for BO04826.5prime
Subject Subject Range Query Range Percent Splice Strand
arm_2R 6333011..6333129 16..134 100 -> Plus
arm_2R 6335704..6335888 135..319 98 -> Plus
arm_2R 6335977..6336137 320..480 100 -> Plus
arm_2R 6348408..6348536 481..609 100 -> Plus
arm_2R 6348601..6348730 610..739 100 -> Plus
arm_2R 6348795..6348905 740..850 100   Plus

BO04826.complete Sequence

1096 bp (1096 high quality bases) assembled on 2005-09-08

GenBank Submission: FJ629878

> BO04826.complete
GAAGTTATCAGTCGACATGGGCTGCGCACAGTCTGCCGAGGAGCGAGCCG
CAGCCGCCAGGAGTCGCCTCATCGAGCGCAATCTCAAGGAGGACGGCATA
CAGGCGGCAAAGGACATCAAACTCCTGCTGCTGGGTGCCGGTGAGTCGGG
CAAGAGCACAATAGTCAAACAGATGAAAATCATTCACGAGAGCGGCTTCA
CTGCTGAGGACTTTAAACAATATCGACCGGTTGTCTACAGCAACACAATA
CAATCATTAGTTGCAATATTGCGCGCGATGCCAACCCTAAGTATTCAGTA
CAGCAATAACGAGCGGGAGAGCGATGCCAAGATGGTGTTCGACGTATGCC
AACGCATGCACGACACCGAGCCCTTCTCGGAGGAGCTGCTGGCCGCCATG
AAACGCCTCTGGCAGGACGCCGGTGTCCAGGAGTGCTTCTCGCGCAGCAA
CGAATACCAACTAAACGATTCCGCAAAATATTTCCTGGACGATTTGGATC
GGTTAGGCGCCAAGGATTACCAGCCAACTGAACAAGATATCTTGCGCACT
CGCGTCAAGACCACTGGCATCGTTGAGGTACACTTCTCCTTCAAAAACCT
CAACTTTAAATTGTTTGACGTGGGCGGTCAGCGCTCGGAACGTAAGAAAT
GGATACACTGCTTCGAAGATGTCACGGCGATCATTTTCTGCGTGGCCATG
TCCGAGTACGATCAAGTCTTGCATGAGGATGAAACCACGAACCGCATGCA
AGAGTCGCTGAAACTGTTTGACTCGATCTGTAACAACAAATGGTTCACGG
ACACCTCGATTATTCTATTCCTGAACAAGAAGGATTTGTTCGAGGAGAAG
ATTCGCAAGAGTCCCCTGACGATTTGCTTCCCCGAATACACAGGTGGACA
GGAGTACGGCGAGGCGGCTGCTTACATTCAGGCTCAATTTGAAGCGAAAA
ACAAATCAACCTCAAAAGAAATCTACTGCCACATGACGTGTGCCACAGAT
ACCAATAACATTCAGTTTGTATTCGATGCTGTCACCGATGTCATCATAGC
AAACAACCTGCGCGGCTGTGGACTGTACGCAAGCTTTCTAGACCAT

BO04826.complete Blast Records

Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 08:35:46
Subject Length Description Subject Range Query Range Score Percent Strand
Galphao-RI 1065 CG2204-PI 1..1062 17..1078 5280 99.8 Plus
Galphao-RA 1065 CG2204-PA 1..1062 17..1078 5280 99.8 Plus
Galphao-RC 1065 CG2204-PC 1..1062 17..1078 5280 99.8 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 08:35:47
Subject Length Description Subject Range Query Range Score Percent Strand
Galphao-RI 5457 CG2204-RI 391..1453 16..1078 5285 99.8 Plus
Galphao-RA 3462 CG2204-RA 379..1441 16..1078 5285 99.8 Plus
Galphao-RC 2367 CG2204-RC 316..1378 16..1078 5285 99.8 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 08:35:44
Subject Length Description Subject Range Query Range Score Percent Strand
2R 25286936 2R 10461510..10461697 891..1078 940 100 Plus
2R 25286936 2R 10448198..10448383 134..319 900 98.9 Plus
2R 25286936 2R 10448470..10448632 318..480 815 100 Plus
2R 25286936 2R 10461289..10461446 739..896 790 100 Plus
2R 25286936 2R 10461096..10461225 610..739 650 100 Plus
2R 25286936 2R 10460903..10461031 481..609 645 100 Plus
2R 25286936 2R 10445506..10445627 16..137 610 100 Plus
3L 28110227 3L 6973588..6973731 895..752 225 77.1 Minus
2R 25286936 2R 10439577..10439633 80..136 195 89.5 Plus
Blast to na_te.dros performed on 2014-11-28 08:35:45 has no hits.

BO04826.complete Sim4 Records

Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-21 22:38:55 Download gff for BO04826.complete
Subject Subject Range Query Range Percent Splice Strand
G-oalpha47A-RI 1..1065 17..1082 99   Plus
Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-07-28 16:58:47 Download gff for BO04826.complete
Subject Subject Range Query Range Percent Splice Strand
G-oalpha47A-RI 111..1172 17..1080 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:23:31 Download gff for BO04826.complete
Subject Subject Range Query Range Percent Splice Strand
Galphao-RC 317..1378 17..1080 99   Plus
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 22:38:55 Download gff for BO04826.complete
Subject Subject Range Query Range Percent Splice Strand
G-oalpha47A-RI 110..1176 16..1083 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 09:21:15 Download gff for BO04826.complete
Subject Subject Range Query Range Percent Splice Strand
Galphao-RC 317..1378 17..1080 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 09:21:15 Download gff for BO04826.complete
Subject Subject Range Query Range Percent Splice Strand
2R 10461290..10461443 740..893 100 -> Plus
2R 10448199..10448383 135..319 98 -> Plus
2R 10448472..10448632 320..480 100 -> Plus
2R 10460903..10461031 481..609 100 -> Plus
2R 10461096..10461225 610..739 100 -> Plus
2R 10445507..10445624 17..134 100 -> Plus
2R 10461513..10461697 894..1080 98   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:23:31 Download gff for BO04826.complete
Subject Subject Range Query Range Percent Splice Strand
arm_2R 6333012..6333129 17..134 100 -> Plus
arm_2R 6335704..6335888 135..319 98 -> Plus
arm_2R 6335977..6336137 320..480 100 -> Plus
arm_2R 6348408..6348536 481..609 100 -> Plus
arm_2R 6348601..6348730 610..739 100 -> Plus
arm_2R 6348795..6348948 740..893 100 -> Plus
arm_2R 6349018..6349202 894..1080 98   Plus

BO04826.pep Sequence

Translation from 16 to 1096

> BO04826.pep
MGCAQSAEERAAAARSRLIERNLKEDGIQAAKDIKLLLLGAGESGKSTIV
KQMKIIHESGFTAEDFKQYRPVVYSNTIQSLVAILRAMPTLSIQYSNNER
ESDAKMVFDVCQRMHDTEPFSEELLAAMKRLWQDAGVQECFSRSNEYQLN
DSAKYFLDDLDRLGAKDYQPTEQDILRTRVKTTGIVEVHFSFKNLNFKLF
DVGGQRSERKKWIHCFEDVTAIIFCVAMSEYDQVLHEDETTNRMQESLKL
FDSICNNKWFTDTSIILFLNKKDLFEEKIRKSPLTICFPEYTGGQEYGEA
AAYIQAQFEAKNKSTSKEIYCHMTCATDTNNIQFVFDAVTDVIIANNLRG
CGLYASFLDH

BO04826.pep Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 19:34:22
Subject Length Description Subject Range Query Range Score Percent Strand
Galphao-PI 354 CG2204-PI 1..354 1..354 1838 100 Plus
Galphao-PA 354 CG2204-PA 1..354 1..354 1838 100 Plus
Galphao-PC 354 CG2204-PC 1..354 1..354 1838 100 Plus
Galphao-PH 354 CG2204-PH 1..354 1..354 1806 98 Plus
Galphao-PG 354 CG2204-PG 1..354 1..354 1806 98 Plus