Clone Sequence Records
BO04831.3prime Sequence
958 bp (822 high quality bases) assembled on 2005-12-02
> BO04831.3prime
ATGGTCTAGAAAGCTTGCATTGGGAATCGAGGCGGCAGGAGCAGCCAGTG
GCAGGACCTCTAGCTTATGCGAATCACTGTGATCGCTGACGAAGTGCAGC
ACTTCGAAGCCCACCTCTACCATGATCAGGATTATGATCATCCACTCGAG
CCGGATATGATGGGCATCGTTCAGATTGTGGGACACCAGCTCGGCCAGTT
CCACGCAGTGGTTGATCTTCTCGTTCATCACCTTGGTGCGCCGTGAGATG
CTGAAGTAGGAGCACACCTGCAGGTAGAGTGCCTCCAGTTCCTCGCGGTC
CCAGTAGAAATCGGGTGCATCCAGCAGATCCGACGACAGGTTGATCACAT
GACGCAGGGCAAATAATTCACCGGTTTTTCGCAGCATGGCCGCCCGCGAG
ATTCTCAATCGGCGACCACGCTTTAGATCCTCGGTGAGATGCTCTATGGA
GTCTATGTAGCGGTCCAGTGTCGCCTCCCACATGCCCAGCTTTATTGACT
GTGCCATCGCATTGGAGAAGGTGTACTTGTACAGGAAACTATCCGTATCG
GCGGTAACAAAGAACTTGCCATTCTGGAAGAATGCCCGTGACGTGACATT
GAAGTCGCTGCTCTCCGCCACCAGATCGCCCTCCACATCCACCGCCGTCG
ATGGAATGTAGGTGTAGGGCATCACCTCGCTCTCCCCGTGAACCAGGGCA
CTCACATACGATTCCCTTTCGAAGGCGCGCAGGAAACTTAGCACATTGTT
CGTCTCGATGTCGCTGCAGTTCCAAAAGACCACCGAGCCCTCGCGGAAGA
AGAATATCTCCCGCGGCTGCTGACCCGTCGGATATTTGGCCGCCACAAAG
AGCACATTCTGCTCCACGTCCAGATTGTCTGTGGAGAAGAAACGCTTCGT
CTCGTACAGGTTCTGCTCGCGGAGGGCTATCTGCAGATCCTCCAGATTGT
ACTCCTCG
BO04831.3prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 12:12:04
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG11679-PA | 1263 | CG11679-RA | 321..1260 | 958..19 | 4625 | 99.6 | Minus |
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-13 05:40:07
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG11679-RA | 1462 | CG11679-RA | 449..1388 | 958..19 | 4655 | 99.7 | Minus |
Blast to na_all.dmel.RELEASE6 performed 2015-02-13 05:40:05
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| X | 23542271 | X | 15737567..15738506 | 19..958 | 4655 | 99.7 | Plus |
Blast to na_te.dros performed on 2015-02-13 05:40:06 has no hits.
BO04831.3prime Sim4 Records
Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 02:10:58 Download gff for
BO04831.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG11679-PA | 321..1263 | 18..958 | 99 | | Minus |
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 00:27:45 Download gff for
BO04831.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG11679-PA | 321..1263 | 18..958 | 99 | | Minus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-09-01 17:55:09 Download gff for
BO04831.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG11679-RA | 449..1395 | 14..958 | 99 | | Minus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-13 07:56:10 Download gff for
BO04831.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG11679-RA | 449..1395 | 14..958 | 99 | | Minus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-13 07:56:10 Download gff for
BO04831.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| X | 15737560..15738506 | 14..958 | 99 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-09-01 17:55:09 Download gff for
BO04831.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_X | 15631593..15632539 | 14..958 | 99 | | Plus |
BO04831.5prime Sequence
958 bp (887 high quality bases) assembled on 2005-11-29
> BO04831.5prime
GAAGTTATCAGTCGACATGAACTTTGCACGCCTGAGATTCGGGCAGATGG
TCCTTGGAGGACTTCGAATTCCGCGCCAGCAGACGCAGACGCAGTGGATG
ATGGACCGCCGCCGATGGTTGGCCAGTGAAGCCACCTCATCGGCTGCGGC
GCCAGCTCAAGCAGCTTCTGTACCTAGAACTCAAACGCAACCGCGGGTAA
AGCCATTGCCGCTAGCCGAGGAGCGCTTGGAGTCGATACTATCGCCCATT
CGCACCAGGATCATTCGAAAGAAGCGCTTGGCCATCGATGAACTGTCCGC
TTTGGGGTTTCTCAACACCCGTGGTTATACGACCGCCGAGGAGTACAATC
TGGAGGATCTGCAGATAGCCCTCCGCGAGCAGAACCTGTACGAGACGAAG
CGTTTCTTCTCCACAGACAATCTGGACGTGGAGCAGAATGTGCTCTTTGT
GGCGGCCAAATATCCGACGGGTCAGCAGCCGCGGGAGATATTCTTCTTCC
GCGAGGGCTCGGTGGTCTTTTGGAACTGCAGCGACATCGAGACGAACAAT
GTGCTAAGTTTCCTGCGCGCCTTCGAAAGGGAATCGTATGTGAGTGCCCT
GGTTCACGGGGAGAGCGAGGTGATGCCCTACACCTACATTCCATCGACGG
CGGTGGATGTGGAGGGCGATCTGGTGGCGGAGAGCAGCGACTTCAATGTC
ACGTCACGGGCATTCTTCCAGAATGGCAAGTTCTTTGTTACCGCCGATAC
GGATAGTTTCCTGTACAAGTACACCTTCTCCAATGCGATGGCACAGTCAA
TAAAGCTGGGCATGTGGGAGGCGACACTGGACCGCTACATAGACTCCATA
GAGCATCTCACCGAGGATCTAAAGCGTGGTCGCCGATTGAGAATCTCGCG
GGCGGCCATGCTGCGAAAAACCGGTGAATTATTTGCCCCGCGTCATGTGA
TCAACCTG
BO04831.5prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 12:12:05
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG11679-PA | 1263 | CG11679-RA | 1..942 | 17..958 | 4610 | 99.5 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-12 06:28:25
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG11679-RA | 1462 | CG11679-RA | 128..1070 | 16..958 | 4655 | 99.6 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2015-02-12 06:28:18
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| X | 23542271 | X | 15737885..15738827 | 958..16 | 4655 | 99.6 | Minus |
Blast to na_te.dros performed on 2015-02-12 06:28:22 has no hits.
BO04831.5prime Sim4 Records
Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 02:10:59 Download gff for
BO04831.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG11679-PA | 1..942 | 17..958 | 99 | | Plus |
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 00:27:46 Download gff for
BO04831.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG11679-PA | 1..942 | 17..958 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-29 05:27:22 Download gff for
BO04831.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG11679-RA | 119..1070 | 7..958 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-12 08:14:30 Download gff for
BO04831.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG11679-RA | 119..1070 | 7..958 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-12 08:14:30 Download gff for
BO04831.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| X | 15737885..15738836 | 7..958 | 99 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-29 05:27:22 Download gff for
BO04831.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_X | 15631918..15632869 | 7..958 | 99 | | Minus |
BO04831.complete Sequence
1294 bp (1294 high quality bases) assembled on 2005-09-08
GenBank Submission: FJ629883
> BO04831.complete
GAAGTTATCAGTCGACATGAACTTTGCACGCCTGAGATTCGGGCAGATGG
TCCTTGGAGGACTTCGAATTCCGCGCCAGCAGACGCAGACGCAGTGGATG
ATGGACCGCCGCCGATGGTTGGCCAGTGAAGCCACCTCATCGGCTGCGGC
GCCAGCTCAAGCAGCTTCTGTACCTAGAACTCAAACGCAACCGCGGGTAA
AGCCATTGCCGCTAGCCGAGGAGCGCTTGGAGTCGATACTATCGCCCATT
CGCACCAGGATCATTCGAAAGAAGCGCTTGGCCATCGATGAACTGTCCGC
TTTGGGGTTTCTCAACACCCGTGGTTATACGACCGCCGAGGAGTACAATC
TGGAGGATCTGCAGATAGCCCTCCGCGAGCAGAACCTGTACGAGACGAAG
CGTTTCTTCTCCACAGACAATCTGGACGTGGAGCAGAATGTGCTCTTTGT
GGCGGCCAAATATCCGACGGGTCAGCAGCCGCGGGAGATATTCTTCTTCC
GCGAGGGCTCGGTGGTCTTTTGGAACTGCAGCGACATCGAGACGAACAAT
GTGCTAAGTTTCCTGCGCGCCTTCGAAAGGGAATCGTATGTGAGTGCCCT
GGTTCACGGGGAGAGCGAGGTGATGCCCTACACCTACATTCCATCGACGG
CGGTGGATGTGGAGGGCGATCTGGTGGCGGAGAGCAGCGACTTCAATGTC
ACGTCACGGGCATTCTTCCAGAATGGCAAGTTCTTTGTTACCGCCGATAC
GGATAGTTTCCTGTACAAGTACACCTTCTCCAATGCGATGGCACAGTCAA
TAAAGCTGGGCATGTGGGAGGCGACACTGGACCGCTACATAGACTCCATA
GAGCATCTCACCGAGGATCTAAAGCGTGGTCGCCGATTGAGAATCTCGCG
GGCGGCCATGCTGCGAAAAACCGGTGAATTATTTGCCCTGCGTCATGTGA
TCAACCTGTCGTCGGATCTGCTGGATGCACCCGATTTCTACTGGGACCGC
GAGGAACTGGAGGCACTCTACCTGCAGGTGTGCTCCTACTTCAGCATCTC
ACGGCGCACCAAGGTGATGAACGAGAAGATCAACCACTGCGTGGAACTGG
CCGAGCTGGTGTCCCACAATCTGAACGATGCCCATCATATCCGGCTCGAG
TGGATGATCATAATCCTGATCATGGTAGAGGTGGGCTTCGAAGTGCTGCA
CTTCGTCAGCGATCACAGTGATTCGCATAAGCTAGAGGTCCTGCCACTGG
CTGCTCCTGCCGCCTCGATTCCCAATGCAAGCTTTCTAGACCAT
BO04831.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-27 13:54:39
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG11679-RA | 1263 | CG11679-PA | 1..1260 | 17..1276 | 6255 | 99.8 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 13:54:40
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG11679-RA | 1462 | CG11679-RA | 128..1388 | 16..1276 | 6260 | 99.8 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 13:54:36
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| X | 23542271 | X | 15737567..15738827 | 1276..16 | 6260 | 99.8 | Minus |
Blast to na_te.dros performed on 2014-11-27 13:54:38 has no hits.
BO04831.complete Sim4 Records
Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-21 22:39:01 Download gff for
BO04831.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG11679-RA | 1..1263 | 17..1277 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-11 07:07:40 Download gff for
BO04831.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG11679-RA | 74..1350 | 7..1281 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 17:28:20 Download gff for
BO04831.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG11679-RA | 129..1388 | 17..1278 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 22:39:01 Download gff for
BO04831.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG11679-RA | 74..1350 | 7..1281 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 14:58:50 Download gff for
BO04831.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG11679-RA | 129..1388 | 17..1278 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 14:58:50 Download gff for
BO04831.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| X | 15737563..15738826 | 17..1278 | 99 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 17:28:20 Download gff for
BO04831.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_X | 15631596..15632859 | 17..1278 | 99 | | Minus |
BO04831.pep Sequence
Translation from 16 to 1294
> BO04831.pep
MNFARLRFGQMVLGGLRIPRQQTQTQWMMDRRRWLASEATSSAAAPAQAA
SVPRTQTQPRVKPLPLAEERLESILSPIRTRIIRKKRLAIDELSALGFLN
TRGYTTAEEYNLEDLQIALREQNLYETKRFFSTDNLDVEQNVLFVAAKYP
TGQQPREIFFFREGSVVFWNCSDIETNNVLSFLRAFERESYVSALVHGES
EVMPYTYIPSTAVDVEGDLVAESSDFNVTSRAFFQNGKFFVTADTDSFLY
KYTFSNAMAQSIKLGMWEATLDRYIDSIEHLTEDLKRGRRLRISRAAMLR
KTGELFALRHVINLSSDLLDAPDFYWDREELEALYLQVCSYFSISRRTKV
MNEKINHCVELAELVSHNLNDAHHIRLEWMIIILIMVEVGFEVLHFVSDH
SDSHKLEVLPLAAPAASIPNASFLDH
BO04831.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 19:33:59
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG11679-PA | 420 | CG11679-PA | 1..420 | 1..420 | 2146 | 100 | Plus |
