Clone BO04836 Report

Search the DGRC for BO04836

Clone and Library Details

Library:BO
Tissue Source:D. melanogaster
Created by:Joe Carlson
Date Registered:2004-06-03
Comments:Infusion clones with open reading frames
Original Plate Number:48
Well:36
Vector:pDNR-Dual
Associated Gene/TranscriptAdy43A-RA
Protein status:BO04836.pep: validated full length
Sequenced Size:1132

Clone Sequence Records

BO04836.3prime Sequence

956 bp (851 high quality bases) assembled on 2005-12-02

> BO04836.3prime
ATGGTCTAGAAAGCTTGCGGGCAGATTGCAGCCCACCTGGGTGACGACCT
TGGCGGCTACGCTGGAGGCCATTCGGATGCACTCGCCCAGCGAGCGCTTC
TCCAGCCAGGCGTGCAAGAATCCGGCCACAAAAGCATCTCCGGCCCCAGT
GGCATCCACCAGCTGCTCTACGCGCTGCGCCCTGAAGTCCTCAAAGCTTA
CGGGTCCGGGAGGAGCCAGCTCCTCCACGTAGTTGGTGATCACCTGGACG
CCGGCACTGCCGTTGGTGACGAAGATGACCTTGGTGCCACCGGATTGCAG
GAGATGATCCGCCAGTTCGTCGACGTTTCGGAACCCACCCGCAGCCTCGG
CCAGCGCCTCGAACTCCTGTCGGTTTCCGAACAGGAAGAAGGCGGCCCGG
GCCAGCTTCATCATAGCCTGGTGATTTTTCCTCACAATGTAGGGTGCACT
GAGATTGAGAGCCAGGCGTCGCCGCTCCCGCACCAGGTGCTGCACTATGT
AATCGCACACATCACTCCTCTGGGGCACAAAGAAGCCCTCCACGTACAGG
ATTTGCTTGCGCTCCACCGGTCGCAGGAAGCTCTGGCCTTCGTGGCTGAC
GGCGTGGCTCAGGGTCTGCACCTCGAACTGAGCCGAGGCGCCGATGTTGG
CGTACAGCGTGGGGTTGTCCTGATACATGAGGCACACGCACTGCCCTGTG
TGCGCATCCTCGACGGTCTGCAGCCTGGCCTCGATGCCGCGATCCCGAAT
GATCTGGCGCAGCTCCTCGGCGTGCTTGTCGGCTCCCACGGCGCCAAAGA
AGAGCGCGTCTGTGCCCAGCTGCTTCAGGATGCGGGCAGTGTTGAGGGCA
GAGCCACCCGGGTTTGTAAGGCACCGAGAGCTCTCAGAAGCCTCCGCTGC
CAGCTGGTTGAGTTTTCTCATGTCCAGTTCACCCTTGGAGCCCAGTTCCA
GGCCCG

BO04836.3prime Blast Records

Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 12:12:10
Subject Length Description Subject Range Query Range Score Percent Strand
CG1851-PA 1101 Ady43A-RA 202..1098 915..19 4485 100 Minus
CG1851-PA 1101 Ady43A-RA 163..198 954..919 180 100 Minus
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-13 02:13:25
Subject Length Description Subject Range Query Range Score Percent Strand
Ady43A-RA 2203 CG1851-RA 638..1573 954..19 4635 99.8 Minus
Blast to na_all.dmel.RELEASE6 performed 2015-02-13 02:13:22
Subject Length Description Subject Range Query Range Score Percent Strand
2R 25286936 2R 7243654..7244517 19..882 4320 100 Plus
2R 25286936 2R 7244988..7245061 881..954 325 95.9 Plus
Blast to na_te.dros performed on 2015-02-13 02:13:23 has no hits.

BO04836.3prime Sim4 Records

Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 02:11:05 Download gff for BO04836.3prime
Subject Subject Range Query Range Percent Splice Strand
CG1851-PA 162..1101 18..956 99   Minus
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 00:27:56 Download gff for BO04836.3prime
Subject Subject Range Query Range Percent Splice Strand
CG1851-PA 162..1101 18..956 99   Minus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-09-01 06:35:21 Download gff for BO04836.3prime
Subject Subject Range Query Range Percent Splice Strand
Ady43A-RA 637..1573 19..956 99   Minus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-13 03:41:14 Download gff for BO04836.3prime
Subject Subject Range Query Range Percent Splice Strand
Ady43A-RA 637..1573 19..956 99   Minus
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-13 03:41:14 Download gff for BO04836.3prime
Subject Subject Range Query Range Percent Splice Strand
2R 7243654..7244515 19..880 100 <- Plus
2R 7244988..7245062 881..956 96   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-09-01 06:35:21 Download gff for BO04836.3prime
Subject Subject Range Query Range Percent Splice Strand
arm_2R 3131159..3132020 19..880 100 <- Plus
arm_2R 3132493..3132567 881..956 96   Plus

BO04836.5prime Sequence

833 bp (811 high quality bases) assembled on 2005-11-29

> BO04836.5prime
GAAGTTATCAGTCGACATGGAGTACCTGAGCTACGTGTACGAAAAAATCT
TCGGGGGCAATCCTCCCACGGATGACACGCAAGGGGCTTTCCACACGCCC
CGCAAGGTCATCTGCTTCGGCAACGTCCTGCTCGACCGACTAGTCCAGCT
CGAGGATCCCCAACTCCTGGAGCGGTTCGGCCTGGAACTGGGCTCCAAGG
GTGAACTGGACATGGAGAAACTCAACCAGCTGGCAGCGGAGGCTTCTGAG
AGCTCTCGGTGCCTTACAAACCCGGGTGGCTCTGCCCTCAACACTGCCCG
CATCCTGAAGCAGCTGGGCACAGACGCGCTCTTCTTTGGCGCCGTGGGAG
CCGACAAGCACGCCGAGGAGCTGCGCCAGATCATTCGGGATCGCGGCATC
GAGGCCAGGCTGCAGACCGTCGAGGATGCGCACACAGGGCAGTGCGTGTG
CCTCATGTATCAGGACAACCCCACGCTGTACGCCAACATCGGCGCCTCGG
CTCAGTTCGAGGTGCAGACCCTGAGCCACGCCGTCAGCCACGAAGGCCAG
AGCTTCCTGCGACCGGTGGAGCGCAAGCAAATCCTGTACGTGGAGGGCTT
CTTTGTGCCCCAGAGGAGTGATGTGTGCGATTACATAGTGCAGCACCTGG
TGCGGGAGCGGCGACGCCTGGCTCTCAATCTCAGTGCACCCTACATTGTG
AGGAAAAATCACCAGGCTATGATGAAGCTGGCCCGGGCCGCCTTCTTCCT
GTTCGGAAACCGACAGGAGTTCGAGGCGCTGGCCGAGGCTGCGGGTGGGT
TCCGAAACGTCGACGAACTGGCGGATCATCTCC

BO04836.5prime Blast Records

Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 12:12:11
Subject Length Description Subject Range Query Range Score Percent Strand
CG1851-PA 1101 Ady43A-RA 1..817 17..833 4085 100 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-04 19:29:50
Subject Length Description Subject Range Query Range Score Percent Strand
Ady43A-RA 2203 CG1851-RA 476..1292 17..833 4085 100 Plus
Blast to na_all.dmel.RELEASE6 performed 2015-02-04 19:29:44
Subject Length Description Subject Range Query Range Score Percent Strand
2R 25286936 2R 7243935..7244517 833..251 2915 100 Minus
2R 25286936 2R 7244988..7245143 252..97 780 100 Minus
2R 25286936 2R 7245221..7245301 97..17 405 100 Minus
Blast to na_te.dros performed on 2015-02-04 19:29:47 has no hits.

BO04836.5prime Sim4 Records

Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 02:11:06 Download gff for BO04836.5prime
Subject Subject Range Query Range Percent Splice Strand
CG1851-PA 1..817 17..833 100   Plus
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 00:27:57 Download gff for BO04836.5prime
Subject Subject Range Query Range Percent Splice Strand
CG1851-PA 1..817 17..833 100   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-10 21:17:50 Download gff for BO04836.5prime
Subject Subject Range Query Range Percent Splice Strand
Ady43A-RA 470..1292 9..833 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-04 21:35:19 Download gff for BO04836.5prime
Subject Subject Range Query Range Percent Splice Strand
Ady43A-RA 470..1292 9..833 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-04 21:35:19 Download gff for BO04836.5prime
Subject Subject Range Query Range Percent Splice Strand
2R 7243935..7244515 253..833 100 <- Minus
2R 7244988..7245143 97..252 100 <- Minus
2R 7245222..7245307 9..96 95   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-10 21:17:50 Download gff for BO04836.5prime
Subject Subject Range Query Range Percent Splice Strand
arm_2R 3131440..3132020 253..833 100 <- Minus
arm_2R 3132493..3132648 97..252 100 <- Minus
arm_2R 3132727..3132812 9..96 95   Minus

BO04836.complete Sequence

1132 bp (1132 high quality bases) assembled on 2005-09-08

GenBank Submission: FJ629886

> BO04836.complete
GAAGTTATCAGTCGACATGGAGTACCTGAGCTACGTGTACGAAAAAATCT
TCGGGGGCAATCCTCCCACGGATGACACGCAAGGGGCTTTCCACACGCCC
CGCAAGGTCATCTGCTTCGGCAACGTCCTGCTCGACCGACTAGTCCAGCT
CGAGGATCCCCAACTCCTGGAGCGGTTCGGCCTGGAACTGGGCTCCAAGG
GTGAACTGGACATGGAGAAACTCAACCAGCTGGCAGCGGAGGCTTCTGAG
AGCTCTCGGTGCCTTACAAACCCGGGTGGCTCTGCCCTCAACACTGCCCG
CATCCTGAAGCAGCTGGGCACAGACGCGCTCTTCTTTGGCGCCGTGGGAG
CCGACAAGCACGCCGAGGAGCTGCGCCAGATCATTCGGGATCGCGGCATC
GAGGCCAGGCTGCAGACCGTCGAGGATGCGCACACAGGGCAGTGCGTGTG
CCTCATGTATCAGGACAACCCCACGCTGTACGCCAACATCGGCGCCTCGG
CTCAGTTCGAGGTGCAGACCCTGAGCCACGCCGTCAGCCACGAAGGCCAG
AGCTTCCTGCGACCGGTGGAGCGCAAGCAAATCCTGTACGTGGAGGGCTT
CTTTGTGCCCCAGAGGAGTGATGTGTGCGATTACATAGTGCAGCACCTGG
TGCGGGAGCGGCGACGCCTGGCTCTCAATCTCAGTGCACCCTACATTGTG
AGGAAAAATCACCAGGCTATGATGAAGCTGGCCCGGGCCGCCTTCTTCCT
GTTCGGAAACCGACAGGAGTTCGAGGCGCTGGCCGAGGCTGCGGGTGGGT
TCCGAAACGTCGACGAACTGGCGGATCATCTCCTGCAATCCGGTGGCACC
AAGGTCATCTTCGTCACCAACGGCAGTGCCGGCGTCCAGGTGATCACCAA
CTACGTGGAGGAGCTGGCTCCTCCCGGACCCGTAAGCTTTGAGGACTTCA
GGGCGCAGCGCGTAGAGCAGCTGGTGGATGCCACTGGGGCCGGAGATGCT
TTTGTGGCCGGATTCTTGCACGCCTGGCTGGAGAAGCGCTCGCTGGGCGA
GTGCATCCGAATGGCCTCCAGCGTAGCCGCCAAGGTCGTCACCCAGGTGG
GCTGCAATCTGCCCGCAAGCTTTCTAGACCAT

BO04836.complete Blast Records

Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-27 07:29:22
Subject Length Description Subject Range Query Range Score Percent Strand
Ady43A-RA 1101 CG1851-PA 1..1098 17..1114 5490 100 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 07:29:23
Subject Length Description Subject Range Query Range Score Percent Strand
Ady43A-RA 2203 CG1851-RA 476..1573 17..1114 5490 100 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 07:29:20
Subject Length Description Subject Range Query Range Score Percent Strand
2R 25286936 2R 7243654..7244517 1114..251 4320 100 Minus
2R 25286936 2R 7244988..7245143 252..97 780 100 Minus
2R 25286936 2R 7245221..7245301 97..17 405 100 Minus
Blast to na_te.dros performed on 2014-11-27 07:29:21 has no hits.

BO04836.complete Sim4 Records

Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-21 22:38:49 Download gff for BO04836.complete
Subject Subject Range Query Range Percent Splice Strand
Ady43A-RA 1..1101 17..1115 99   Plus
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-11 07:07:24 Download gff for BO04836.complete
Subject Subject Range Query Range Percent Splice Strand
Ady43A-RA 452..1555 9..1114 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 05:16:20 Download gff for BO04836.complete
Subject Subject Range Query Range Percent Splice Strand
Ady43A-RA 476..1573 17..1116 99   Plus
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 22:38:49 Download gff for BO04836.complete
Subject Subject Range Query Range Percent Splice Strand
Ady43A-RA 452..1555 9..1114 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 08:11:41 Download gff for BO04836.complete
Subject Subject Range Query Range Percent Splice Strand
Ady43A-RA 476..1573 17..1116 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 08:11:41 Download gff for BO04836.complete
Subject Subject Range Query Range Percent Splice Strand
2R 7243652..7244515 253..1116 99 <- Minus
2R 7244988..7245143 97..252 100 <- Minus
2R 7245222..7245301 17..96 100   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 05:16:20 Download gff for BO04836.complete
Subject Subject Range Query Range Percent Splice Strand
arm_2R 3131157..3132020 253..1116 99 <- Minus
arm_2R 3132493..3132648 97..252 100 <- Minus
arm_2R 3132727..3132806 17..96 100   Minus

BO04836.pep Sequence

Translation from 16 to 1132

> BO04836.pep
MEYLSYVYEKIFGGNPPTDDTQGAFHTPRKVICFGNVLLDRLVQLEDPQL
LERFGLELGSKGELDMEKLNQLAAEASESSRCLTNPGGSALNTARILKQL
GTDALFFGAVGADKHAEELRQIIRDRGIEARLQTVEDAHTGQCVCLMYQD
NPTLYANIGASAQFEVQTLSHAVSHEGQSFLRPVERKQILYVEGFFVPQR
SDVCDYIVQHLVRERRRLALNLSAPYIVRKNHQAMMKLARAAFFLFGNRQ
EFEALAEAAGGFRNVDELADHLLQSGGTKVIFVTNGSAGVQVITNYVEEL
APPGPVSFEDFRAQRVEQLVDATGAGDAFVAGFLHAWLEKRSLGECIRMA
SSVAAKVVTQVGCNLPASFLDH

BO04836.pep Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 19:34:31
Subject Length Description Subject Range Query Range Score Percent Strand
Ady43A-PA 366 CG1851-PA 1..366 1..366 1877 100 Plus
CG3809-PA 396 CG3809-PA 60..385 34..365 272 25 Plus
AdenoK-PC 345 CG11255-PC 64..335 87..363 267 28 Plus
AdenoK-PB 345 CG11255-PB 64..335 87..363 267 28 Plus
AdenoK-PA 345 CG11255-PA 64..335 87..363 267 28 Plus