Clone Sequence Records
BO04851.3prime Sequence
927 bp (810 high quality bases) assembled on 2005-12-02
> BO04851.3prime
ATGGTCTAGAAAGCTTGCTGTAGCCTTTGTCGCCTTCGCAGGCATTTGGG
CCTTGGCCGCCTTAAGCTGCTCCAAATTGAACTGTTTCCGGATTTCGGTG
GACACCTGGCGAATGACCGCATCCGTATTGGCCTTTAGATCCCGTTCCAG
CACATCAATGTCCACATCCTTGCTCTCCAATCGCATTTGCATGTCCGAAT
AGAAGTCACAAAACAACACCGGTTCATCTGAACCATTCGGCGTCCTCGTG
CTGCAGTATTGACCCCTTCGATGGAGATCATCGTTGTTGGTTTTGGCGTC
CAGGCCAAGCAGACGTCTCGCTCCCAATGGCAGCTGCTGTTGGATCAATC
TCTCGTGATTCTGAGAGATGTGATGCTTCAGCTTCTTGAACTCCTTCACC
TCGTTCTGCATGTACTTCACATAGCTATACATCTTGGAGGTTTTCTTCGT
TAGGTTCTCTAGGCAACTTATAAAGTTTCGCACCTGCTGTGTTCTCGGCA
ATGTGCTGGGATCCAGTCGCTCGGCTTCGTCGAAGTGCTGCAGTGATCGA
TTAAAGTCGTGTTTCATGGCCAGTGCAGAGGCCAGGACCACATGATTCTC
GGCCACATTAGGAGCATGTTCCACCGCAGCGGTCAATATCAGATCGGCAT
CGGCCAGTCGACCCATTCGAAAGAGTATGGTACCCAGACTCAGCAGGGGT
ATATCCTTAAAGATCGGCGGAGCCAGCAAGGCAGCCAATCTGGCACAGGG
CAGGGCTTCCCGGGCATTTCCTCGCATGCGCCAATAGTACGAGCTTAGGG
TGTGGAACTTCCAGGAGGCCGGATGATGCTGCAATCCGTCCACCCGCAAT
CGCCGGGTCATTCCACGGTGGCCATGCCCACATTGGTGTCATGCTCGCGC
TCCAGAAAGGCAGCGGCCAGGACCTCG
BO04851.3prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 12:12:29
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG11436-PA | 1398 | CG11436-RA | 570..1395 | 844..19 | 4130 | 100 | Minus |
| CG11436-PA | 1398 | CG11436-RA | 486..553 | 927..860 | 340 | 100 | Minus |
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-11 15:41:31
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG11436-RA | 1996 | CG11436-RA | 557..1466 | 927..19 | 4480 | 99.7 | Minus |
Blast to na_all.dmel.RELEASE6 performed 2015-02-11 15:41:27
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| X | 23542271 | X | 4550413..4551322 | 19..927 | 4455 | 99.6 | Plus |
Blast to na_te.dros performed on 2015-02-11 15:41:29 has no hits.
BO04851.3prime Sim4 Records
Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 02:11:27 Download gff for
BO04851.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG11436-PA | 486..1398 | 18..927 | 99 | | Minus |
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 00:28:27 Download gff for
BO04851.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG11436-PA | 486..1398 | 18..927 | 99 | | Minus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-25 19:34:42 Download gff for
BO04851.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG11436-RA | 557..1466 | 19..927 | 99 | | Minus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-11 18:31:41 Download gff for
BO04851.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG11436-RA | 557..1466 | 19..927 | 99 | | Minus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-11 18:31:41 Download gff for
BO04851.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| X | 4550413..4551322 | 19..927 | 99 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-25 19:34:42 Download gff for
BO04851.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_X | 4444446..4445355 | 19..927 | 99 | | Plus |
BO04851.5prime Sequence
901 bp (888 high quality bases) assembled on 2005-11-29
> BO04851.5prime
GAAGTTATCAGTCGACATGCGCCTGTGCCCGCTGGCGTTCGCCGTGCTGC
TTGGCCTTTTTCACCTGATCCAGGCCTGCAATCATTGGGTTCTTCGCGAG
GAGCAGATCGTGCCCAAACTGGACTCTCCATTCCACATGCGTGAACCCCA
CAATCTGGCGGCATTTCTCAAGCAGATCAGGTACAGTGAGTATGTGGAGC
GCTCCTATCTGGATCTGCTGCGCAAGCGGGAACAGATTGTGGAGCACCTA
CGATTTTCGATGCGTTTCGGTGAGGATCTGGCCGAGCAGGCCAAGTGCGC
CATGGACTACTACATGCTGGAGAAGCGAATGTCTTACCTGAAAATTACGC
CAGAGCAGTTGAAAAGGATTAATCTTCCGGACCAGAGGCAATTGCACATA
CAGAAGAGCGCATCCTCGATGGGAATGGAGCCGATATGCAGCGATTACCA
TCGATTAAGCGTGGGTCCAGCCACCTATGATCATCTGGAGAGTTTTCGGC
CCGAGGTCCTGGCCGCTGCCTTTCTGGAGCGCGAGCATGACACCAATGTG
GGCATGGCCACCGTGGAATTGACCCGGCGATTTGCGGTGGACGGATTGCA
GCATCATCCGGCCTCCTGGAAGTTCCACACCCTAAGCTCGTACTATTGGC
GCATGCGAGGAAATGCCCGGGAAGCCCTGCCCTGTGCCAGATTGGCTGCC
TTGCTGGCTCCGCCGATCTTTAAGGATATACCCCTGCTGAGTCTGGGTAC
CATACTCTTTCGAATGGGTCGACTGGCCGATGCCGATCTGATATTGACCG
CTGCGGTGGAACATGCTCCTAATGTGGCCGAGAATCATGTGGTCCTGGCC
TCTGCACTGGCCATGAAACACGACTTTAATCGATCACTGCAGCACTTCGA
C
BO04851.5prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 12:12:30
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG11436-PA | 1398 | CG11436-RA | 1..885 | 17..901 | 4425 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-09 18:40:32
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG11436-RA | 1996 | CG11436-RA | 72..956 | 17..901 | 4425 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2015-02-09 18:40:26
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| X | 23542271 | X | 4550923..4551807 | 901..17 | 4425 | 100 | Minus |
Blast to na_te.dros performed on 2015-02-09 18:40:29 has no hits.
BO04851.5prime Sim4 Records
Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 02:11:28 Download gff for
BO04851.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG11436-PA | 1..885 | 17..901 | 100 | | Plus |
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 00:28:28 Download gff for
BO04851.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG11436-PA | 1..885 | 17..901 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-13 03:59:49 Download gff for
BO04851.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG11436-RA | 72..956 | 17..901 | 100 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-09 21:13:40 Download gff for
BO04851.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG11436-RA | 72..956 | 17..901 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-09 21:13:40 Download gff for
BO04851.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| X | 4550923..4551807 | 17..901 | 100 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-13 03:59:49 Download gff for
BO04851.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_X | 4444956..4445840 | 17..901 | 100 | | Minus |
BO04851.complete Sequence
1429 bp (1429 high quality bases) assembled on 2005-09-08
GenBank Submission: FJ629895
> BO04851.complete
GAAGTTATCAGTCGACATGCGCCTGTGCCCGCTGGCGTTCGCCGTGCTGC
TTGGCCTTTTTCACCTGATCCAGGCCTGCAATCATTGGGTTCTTCGCGAG
GAGCAGATCGTGCCCAAACTGGACTCTCCATTCCACATGCGTGAACCCCA
CAATCTGGCGGCATTTCTCAAGCAGATCAGGTACAGTGAGTATGTGGAGC
GCTCCTATCTGGATCTGCTGCGCAAGCGGGAACAGATTGTGGAGCACCTA
CGATTTTCGATGCGTTTCGGTGAGGATCTGGCCGAGCAGGCCAAGTGCGC
CATGGACTACTACATGCTGGAGAAGCGAATGTCTTACCTGAAAATTACGC
CAGAGCAGTTGAAAAGGATTAATCTTCCGGACCAGAGGCAATTGCACATA
CAGAAGAGCGCATCCTCGATGGGAATGGAGCCGATATGCAGCGATTACCA
TCGATTAAGCGTGGGTCCAGCCACCTATGATCATCTGGAGAGTTTTCGGC
CCGAGGTCCTGGCCGCTGCCTTTCTGGAGCGCGAGCATGACACCAATGTG
GGCATGGCCACCGTGGAATTGACCCGGCGATTTGCGGTGGACGGATTGCA
GCATCATCCGGCCTCCTGGAAGTTCCACACCCTAAGCTCGTACTATTGGC
GCATGCGAGGAAATGCCCGGGAAGCCCTGCCCTGTGCCAGATTGGCTGCC
TTGCTGGCTCCGCCGATCTTTAAGGATATACCCCTGCTGAGTCTGGGTAC
CATACTCTTTCGAATGGGTCGACTGGCCGATGCCGATCTGATATTGACCG
CTGCGGTGGAACATGCTCCTAATGTGGCCGAGAATCATGTGGTCCTGGCC
TCTGCACTGGCCATGAAACACGACTTTAATCGATCACTGCAGCACTTCGA
CGAAGCCGAGCGACTGGATCCCAGCACATTGCCGAGAACACAGCAGGTGC
GAAACTTTATAAGTTGCCTAGAGAACCTAACGAAGAAAACCTCCAAGATG
TATAGCTATGTGAAGTACATGCAGAACGAGGTGAAGGAGTTCAAGAAGCT
GAAGCATCACATCTCTCAGAATCACGAGAGATTGATCCAACAGCAGCTGC
CATTGGGAGCGAGACGTCTGCTTGGCCTGGACGCCAAAACCAACAACGAT
GATCTCCATCGAAGGGGTCAATACTGCAGCACGAGGACGCCGAATGGTTC
AGATGAACCGGTGTTGTTTTGTGACTTCTATTCGGACATGCAAATGCGAT
TGGAGAGCAAGGATGTGGACATTGATGTGCTGGAACGGGATCTAAAGGCC
AATACGGATGCGGTCATTCGCCAGGTGTCCACCGAAATCCGGAAACAGTT
CAATTTGGAGCAGCTTAAGGCGGCCAAGGCCCAAATGCCTGCGAAGGCGA
CAAAGGCTACAGCAAGCTTTCTAGACCAT
BO04851.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-27 17:05:40
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG11436-RA | 1398 | CG11436-PA | 1..1395 | 17..1411 | 6975 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 17:05:41
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG11436-RA | 1996 | CG11436-RA | 72..1466 | 17..1411 | 6975 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 17:05:38
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| X | 23542271 | X | 4550413..4551807 | 1411..17 | 6975 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-27 17:05:39 has no hits.
BO04851.complete Sim4 Records
Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-21 22:38:51 Download gff for
BO04851.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG11436-RA | 1..1398 | 17..1412 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-11 07:07:27 Download gff for
BO04851.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG11436-RA | 74..1468 | 17..1411 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 19:01:12 Download gff for
BO04851.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG11436-RA | 72..1466 | 17..1413 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 22:38:51 Download gff for
BO04851.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG11436-RA | 74..1468 | 17..1411 | 100 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 17:34:31 Download gff for
BO04851.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG11436-RA | 72..1466 | 17..1413 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 17:34:31 Download gff for
BO04851.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| X | 4550411..4551807 | 17..1413 | 99 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 19:01:12 Download gff for
BO04851.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_X | 4444444..4445840 | 17..1413 | 99 | | Minus |
BO04851.pep Sequence
Translation from 16 to 1429
> BO04851.pep
MRLCPLAFAVLLGLFHLIQACNHWVLREEQIVPKLDSPFHMREPHNLAAF
LKQIRYSEYVERSYLDLLRKREQIVEHLRFSMRFGEDLAEQAKCAMDYYM
LEKRMSYLKITPEQLKRINLPDQRQLHIQKSASSMGMEPICSDYHRLSVG
PATYDHLESFRPEVLAAAFLEREHDTNVGMATVELTRRFAVDGLQHHPAS
WKFHTLSSYYWRMRGNAREALPCARLAALLAPPIFKDIPLLSLGTILFRM
GRLADADLILTAAVEHAPNVAENHVVLASALAMKHDFNRSLQHFDEAERL
DPSTLPRTQQVRNFISCLENLTKKTSKMYSYVKYMQNEVKEFKKLKHHIS
QNHERLIQQQLPLGARRLLGLDAKTNNDDLHRRGQYCSTRTPNGSDEPVL
FCDFYSDMQMRLESKDVDIDVLERDLKANTDAVIRQVSTEIRKQFNLEQL
KAAKAQMPAKATKATASFLDH
BO04851.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 19:34:28
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG11436-PA | 465 | CG11436-PA | 1..465 | 1..465 | 2414 | 100 | Plus |
