Clone Sequence Records
BO04869.3prime Sequence
874 bp (763 high quality bases) assembled on 2005-12-02
> BO04869.3prime
ATGGTCTAGAAAGCTTGCGAATTCAGCAAACTCCTTGGCACACTTCTCGG
TGCTGGAGATCCGCAGCGCCTCCTCCTCGTAGTCATCGAAATTGCTCGTG
TCGCCGGGACCCTTACACCGCGGAATGAACGGCGCCTCGATTTTCTTTTG
GAAGATCGCAATCCAGTCGGTGGAGGCGAACCACTTCTGGTTCTTAATAT
CATTGACGCCCGCCTTCAGATTGCCGTAGCGCTTGGTCAGATCCACCTGC
AGCAGGTTGCGCAGTAGGTCCTTCAGATCGGAGCCAAAGTGCGATGGGAA
GCGCACCTTGCCGGAGACGATCTTCTCGTAGATCTGAATCGGCTGATCCG
CAAAGAACGGCGGATAGCCGGCGGCCATTTCGTAGACGAGTACGCCCAAC
GCCCACCAGTCCACGGCCTTGTTATAGCCCTTGGACAGAATGATCTCCGG
GGCCAGGTATTCGGGCGTGCCGCACAGTGTCCAGGTGCGTCCCTTGACCC
GCTTGGCAAAACCGAAGTCCGTCACCTTGAGGTAGCCCTGCGAGTCAATC
AGCAGATTCTCCGGCTTCAGATCACGGTAGATGAGGTCCAAGTAGTGCAG
GTACTCGAAGGCCAGCACGATTTGCGCCGCGTAGAAGCGCGAGTGCGGCT
CCGAGAAGCGGCCCACCTTGCGCAGGTGGGAGAACATCTCGCCACCGGGA
ACATACTCCAGCACCATGTAAAGGTTGGAGTTGTCCTTGAAGTGGTAGCG
CAGCGAGACGAGGAAGGGGAACTGAATGGCCTGCAGGATTCGCTTCTCGT
TCAGCGTGTGCTCCACCTGCTTCAGCTTGACCACCTTCTGCTTGTCGAGG
ATCTTCATGGCATAATAGTCTTTC
BO04869.3prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 12:12:50
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG4379-PA | 1062 | Pka-C1-RA | 204..1059 | 874..19 | 4280 | 100 | Minus |
CG4379-PB | 1062 | Pka-C1-RB | 204..1059 | 874..19 | 4280 | 100 | Minus |
CG4379-PC | 1062 | Pka-C1-RC | 204..1059 | 874..19 | 4280 | 100 | Minus |
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-12 06:29:28
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Pka-C1-RD | 4480 | CG4379-RD | 1467..2322 | 874..19 | 4280 | 100 | Minus |
Pka-C1-RC | 5312 | CG4379-RC | 1252..2107 | 874..19 | 4280 | 100 | Minus |
Pka-C1-RB | 5114 | CG4379-RB | 1054..1909 | 874..19 | 4280 | 100 | Minus |
Blast to na_all.dmel.RELEASE6 performed 2015-02-12 06:29:20
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
2L | 23513712 | 2L | 9696508..9697363 | 19..874 | 4280 | 100 | Plus |
Blast to na_te.dros performed on 2015-02-12 06:29:24 has no hits.
BO04869.3prime Sim4 Records
Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 02:11:49 Download gff for
BO04869.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG4379-PB | 204..1062 | 18..874 | 99 | | Minus |
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 00:29:01 Download gff for
BO04869.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG4379-PC | 204..1062 | 18..874 | 99 | | Minus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-29 05:27:32 Download gff for
BO04869.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
Pka-C1-RB | 1054..1909 | 19..874 | 100 | | Minus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-12 08:01:56 Download gff for
BO04869.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
Pka-C1-RB | 1054..1909 | 19..874 | 100 | | Minus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-12 08:01:56 Download gff for
BO04869.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
2L | 9696508..9697363 | 19..874 | 100 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-29 05:27:32 Download gff for
BO04869.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_2L | 9696508..9697363 | 19..874 | 100 | | Plus |
BO04869.5prime Sequence
781 bp (780 high quality bases) assembled on 2005-11-29
> BO04869.5prime
GAAGTTATCAGTCGACATGGGCAACAACGCCACCACGTCGAATAAGAAGG
TCGATGCCGCCGAGACGGTGAAGGAGTTCCTCGAGCAGGCCAAGGAGGAG
TTCGAGGACAAGTGGCGACGCAATCCGACCAACACCGCCGCCCTCGATGA
CTTCGAACGGATCAAGACCCTGGGCACCGGCTCCTTTGGCCGTGTCATGA
TCGTCCAGCACAAGCCCACGAAAGACTATTATGCCATGAAGATCCTCGAC
AAGCAGAAGGTGGTCAAGCTGAAGCAGGTGGAGCACACGCTGAACGAGAA
GCGAATCCTGCAGGCCATTCAGTTCCCCTTCCTCGTCTCGCTGCGCTACC
ACTTCAAGGACAACTCCAACCTTTACATGGTGCTGGAGTATGTTCCCGGT
GGCGAGATGTTCTCCCACCTGCGCAAGGTGGGCCGCTTCTCGGAGCCGCA
CTCGCGCTTCTACGCGGCGCAAATCGTGCTGGCCTTCGAGTACCTGCACT
ACTTGGACCTCATCTACCGTGATCTGAAGCCGGAGAATCTGCTGATTGAC
TCGCAGGGCTACCTCAAGGTGACGGACTTCGGTTTTGCCAAGCGGGTCAA
GGGACGCACCTGGACACTGTGCGGCACGCCCGAATACCTGGCCCCGGAGA
TCATTCTGTCCAAGGGCTATAACAAGGCCGTGGACTGGTGGGCGTTGGGC
GTACTCGTCTACGAAATGGCCGCCGGCTATCCGCCGTTCTTTGCGGATCA
GCCGATTCAGATCTACGAGAAGATCGTCTCC
BO04869.5prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 12:12:51
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG4379-PA | 1062 | Pka-C1-RA | 1..765 | 17..781 | 3825 | 100 | Plus |
CG4379-PB | 1062 | Pka-C1-RB | 1..765 | 17..781 | 3825 | 100 | Plus |
CG4379-PC | 1062 | Pka-C1-RC | 1..765 | 17..781 | 3825 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-13 02:14:08
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Pka-C1-RD | 4480 | CG4379-RD | 1264..2028 | 17..781 | 3825 | 100 | Plus |
Pka-C1-RC | 5312 | CG4379-RC | 1049..1813 | 17..781 | 3825 | 100 | Plus |
Pka-C1-RB | 5114 | CG4379-RB | 851..1615 | 17..781 | 3825 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2015-02-13 02:14:03
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
2L | 23513712 | 2L | 9696802..9697566 | 781..17 | 3825 | 100 | Minus |
Blast to na_te.dros performed on 2015-02-13 02:14:06 has no hits.
BO04869.5prime Sim4 Records
Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 02:11:50 Download gff for
BO04869.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG4379-PB | 1..765 | 17..781 | 100 | | Plus |
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 00:29:02 Download gff for
BO04869.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG4379-PC | 1..765 | 17..781 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-09-01 06:35:27 Download gff for
BO04869.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
Pka-C1-RB | 851..1615 | 17..781 | 100 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-13 03:43:51 Download gff for
BO04869.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
Pka-C1-RB | 851..1615 | 17..781 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-13 03:43:51 Download gff for
BO04869.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
2L | 9696802..9697566 | 17..781 | 100 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-09-01 06:35:27 Download gff for
BO04869.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_2L | 9696802..9697566 | 17..781 | 100 | | Minus |
BO04869.complete Sequence
1093 bp (1093 high quality bases) assembled on 2005-10-17
GenBank Submission: FJ629905
> BO04869.complete
GAAGTTATCAGTCGACATGGGCAACAACGCCACCACGTCGAATAAGAAGG
TCGATGCCGCCGAGACGGTGAAGGAGTTCCTCGAGCAGGCCAAGGAGGAG
TTCGAGGACAAGTGGCGACGCAATCCGACCAACACCGCCGCCCTCGATGA
CTTCGAACGGATCAAGACCCTGGGCACCGGCTCCTTTGGCCGTGTCATGA
TCGTCCAGCACAAGCCCACGAAAGACTATTATGCCATGAAGATCCTCGAC
AAGCAGAAGGTGGTCAAGCTGAAGCAGGTGGAGCACACGCTGAACGAGAA
GCGAATCCTGCAGGCCATTCAGTTCCCCTTCCTCGTCTCGCTGCGCTACC
ACTTCAAGGACAACTCCAACCTTTACATGGTGCTGGAGTATGTTCCCGGT
GGCGAGATGTTCTCCCACCTGCGCAAGGTGGGCCGCTTCTCGGAGCCGCA
CTCGCGCTTCTACGCGGCGCAAATCGTGCTGGCCTTCGAGTACCTGCACT
ACTTGGACCTCATCTACCGTGATCTGAAGCCGGAGAATCTGCTGATTGAC
TCGCAGGGCTACCTCAAGGTGACGGACTTCGGTTTTGCCAAGCGGGTCAA
GGGACGCACCTGGACACTGTGCGGCACGCCCGAATACCTGGCCCCGGAGA
TCATTCTGTCCAAGGGCTATAACAAGGCCGTGGACTGGTGGGCGTTGGGC
GTACTCGTCTACGAAATGGCCGCCGGCTATCCGCCGTTCTTTGCGGATCA
GCCGATTCAGATCTACGAGAAGATCGTCTCCGGCAAGGTGCGCTTCCCAT
CGCACTTTGGCTCCGATCTGAAGGACCTACTGCGCAACCTGCTGCAGGTG
GATCTGACCAAGCGCTACGGCAATCTGAAGGCGGGCGTCAATGATATTAA
GAACCAGAAGTGGTTCGCCTCCACCGACTGGATTGCGATCTTCCAAAAGA
AAATCGAGGCGCCGTTCATTCCGCGGTGTAAGGGTCCCGGCGACACGAGC
AATTTCGATGACTACGAGGAGGAGGCGCTGCGGATCTCCAGCACCGAGAA
GTGTGCCAAGGAGTTTGCTGAATTCGCAAGCTTTCTAGACCAT
BO04869.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-27 13:39:26
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Pka-C1-RD | 1062 | CG4379-PD | 1..1059 | 17..1075 | 5295 | 100 | Plus |
Pka-C1-RC | 1062 | CG4379-PC | 1..1059 | 17..1075 | 5295 | 100 | Plus |
Pka-C1-RB | 1062 | CG4379-PB | 1..1059 | 17..1075 | 5295 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 13:39:28
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Pka-C1-RD | 4480 | CG4379-RD | 1264..2322 | 17..1075 | 5295 | 100 | Plus |
Pka-C1-RC | 5312 | CG4379-RC | 1049..2107 | 17..1075 | 5295 | 100 | Plus |
Pka-C1-RB | 5114 | CG4379-RB | 851..1909 | 17..1075 | 5295 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 13:39:24
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
2L | 23513712 | 2L | 9696508..9697566 | 1075..17 | 5295 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-27 13:39:25 has no hits.
BO04869.complete Sim4 Records
Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-21 22:31:04 Download gff for
BO04869.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
Pka-C1-RC | 1..1062 | 17..1076 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-11 06:57:50 Download gff for
BO04869.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
Pka-C1-RC | 1045..2103 | 17..1075 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 17:21:19 Download gff for
BO04869.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
Pka-C1-RB | 851..1909 | 17..1077 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 22:31:05 Download gff for
BO04869.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
Pka-C1-RC | 1045..2103 | 17..1075 | 100 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 14:52:56 Download gff for
BO04869.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
Pka-C1-RB | 851..1909 | 17..1077 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 14:52:56 Download gff for
BO04869.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
2L | 9696506..9697566 | 17..1077 | 99 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 17:21:19 Download gff for
BO04869.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_2L | 9696506..9697566 | 17..1077 | 99 | | Minus |
BO04869.pep Sequence
Translation from 16 to 1093
> BO04869.pep
MGNNATTSNKKVDAAETVKEFLEQAKEEFEDKWRRNPTNTAALDDFERIK
TLGTGSFGRVMIVQHKPTKDYYAMKILDKQKVVKLKQVEHTLNEKRILQA
IQFPFLVSLRYHFKDNSNLYMVLEYVPGGEMFSHLRKVGRFSEPHSRFYA
AQIVLAFEYLHYLDLIYRDLKPENLLIDSQGYLKVTDFGFAKRVKGRTWT
LCGTPEYLAPEIILSKGYNKAVDWWALGVLVYEMAAGYPPFFADQPIQIY
EKIVSGKVRFPSHFGSDLKDLLRNLLQVDLTKRYGNLKAGVNDIKNQKWF
ASTDWIAIFQKKIEAPFIPRCKGPGDTSNFDDYEEEALRISSTEKCAKEF
AEFASFLDH
BO04869.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 18:49:56
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Pka-C1-PD | 353 | CG4379-PD | 1..353 | 1..353 | 1863 | 100 | Plus |
Pka-C1-PC | 353 | CG4379-PC | 1..353 | 1..353 | 1863 | 100 | Plus |
Pka-C1-PB | 353 | CG4379-PB | 1..353 | 1..353 | 1863 | 100 | Plus |
Pka-C3-PA | 500 | CG6117-PA | 148..481 | 3..336 | 946 | 51.8 | Plus |
Pka-C3-PB | 583 | CG6117-PB | 231..564 | 3..336 | 946 | 51.8 | Plus |