Clone Sequence Records
BO04879.3prime Sequence
910 bp (812 high quality bases) assembled on 2005-12-02
> BO04879.3prime
ATGGTCTAGAAAGCTTGCTCGCTCCTCCAGGATGACCGTTTCCTGCGGAT
ACAGCTTGAGCGACTCCAATGTTTGGCTACTCTCGATGGCCGTAAGATCG
CGACGCGGCCAGCTGCTGATTAGCTTGTACTCCTCGATGAGGAAACCATT
GGCCGTCACAAAGTTGAGCAGATCCTGTAGGTTGTTGTTGATGAAAAAAC
GGCGCTCCAGAAAATCGCCAGTGGGCTTACGCACTCGGATCTTTGAAGTC
CCCGTTTCCTGTTCGGACGGCTCCTGAGGTAGGGATTGTTGAGCAACTAA
TCTGATGGACTCGCGTCTAGCATCTTCTTCGGCCCGCTCGGACTCCATTC
GTTTTCGCTCGGCCAATTGTGCAGCCTCCTTCTGGCGCTTTGCCGCATCC
TTAGCCATGTCGGCTTGCAAAGTTTCCTGATAGGCCATGTCCTGCTCTGC
CTTCACCTGATCACGGGCAGCGCGTTCGTCCTCTTGCCGTATTTCCACCT
GAAGCTGCTCCTCAAACATTTCGCATGTTTCAATCAGCCTCGTAAGCAAG
TCATCCAGACCAATGTTACCATGAATCACAGATAAAACTTCGCAATTGCT
GCCCAGCTGGCGGCTTTTTCCAACCAACATGATGGCTGGCAGCTTGTCCA
ATTTAATGTTTCTGGCCGTCAGAGAGGCGTTGCTGCTAATGCAGGCCGTC
AACGAGGAGAGAAACATGTCCTTGTTGCTCTCGTAGGTCATATCCCAGCC
ATATAAAACAAACTTCTCTTTGAAAGTTTGTATAATGCTCTCATGTTTCA
TCAGTTGATCACAGAAAACGTTGCTGAGAATGCTCTTGCCGTGATGCAAG
TAAATGGCCAACAGCTTGCGCTCCTTGGCGGATCGAANGCAGGCCAGCTG
CTTGGCGTTT
BO04879.3prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 12:13:03
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG8400-PA | 2088 | CG8400-RA | 1194..2085 | 910..19 | 4441 | 99.8 | Minus |
| CG8400-PB | 2088 | CG8400-RB | 1194..2085 | 910..19 | 4441 | 99.8 | Minus |
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-13 01:19:11
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| casp-RC | 2542 | CG8400-RC | 1300..2191 | 910..19 | 4449 | 99.9 | Minus |
| casp-RB | 2557 | CG8400-RB | 1315..2206 | 910..19 | 4449 | 99.9 | Minus |
| casp-RA | 2557 | CG8400-RA | 1315..2206 | 910..19 | 4449 | 99.9 | Minus |
Blast to na_all.dmel.RELEASE6 performed 2015-02-13 01:19:04
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2R | 25286936 | 2R | 16025372..16025648 | 294..570 | 1385 | 100 | Plus |
| 2R | 25286936 | 2R | 16024979..16025137 | 19..177 | 795 | 100 | Plus |
| 2R | 25286936 | 2R | 16025911..16026069 | 714..872 | 795 | 100 | Plus |
| 2R | 25286936 | 2R | 16025706..16025854 | 567..715 | 745 | 100 | Plus |
| 2R | 25286936 | 2R | 16025190..16025310 | 174..294 | 605 | 100 | Plus |
| 2R | 25286936 | 2R | 16026135..16026174 | 871..910 | 189 | 97.5 | Plus |
Blast to na_te.dros performed on 2015-02-13 01:19:08 has no hits.
BO04879.3prime Sim4 Records
Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 02:12:05 Download gff for
BO04879.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG8400-PB | 1194..2088 | 16..910 | 99 | | Minus |
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 00:29:25 Download gff for
BO04879.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG8400-PB | 1194..2088 | 16..910 | 99 | | Minus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-31 20:08:11 Download gff for
BO04879.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| casp-RA | 1315..2206 | 19..910 | 99 | | Minus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-13 03:04:03 Download gff for
BO04879.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| casp-RA | 1315..2206 | 19..910 | 99 | | Minus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-13 03:04:03 Download gff for
BO04879.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2R | 16024979..16025134 | 19..174 | 100 | <- | Plus |
| 2R | 16025191..16025310 | 175..294 | 100 | <- | Plus |
| 2R | 16025373..16025647 | 295..569 | 100 | <- | Plus |
| 2R | 16025709..16025854 | 570..715 | 100 | <- | Plus |
| 2R | 16025913..16026067 | 716..870 | 100 | <- | Plus |
| 2R | 16026135..16026174 | 871..910 | 97 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-31 20:08:11 Download gff for
BO04879.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2R | 11912484..11912639 | 19..174 | 100 | <- | Plus |
| arm_2R | 11912696..11912815 | 175..294 | 100 | <- | Plus |
| arm_2R | 11912878..11913152 | 295..569 | 100 | <- | Plus |
| arm_2R | 11913214..11913359 | 570..715 | 100 | <- | Plus |
| arm_2R | 11913418..11913572 | 716..870 | 100 | <- | Plus |
| arm_2R | 11913640..11913679 | 871..910 | 97 | | Plus |
BO04879.5prime Sequence
915 bp (789 high quality bases) assembled on 2005-12-02
> BO04879.5prime
GAAGTTATCAGTCGACATGTCAGAGAACAAGGACGAGGCCTTGACCAGTT
TTCAGAGCATTACGGGCATCGACGATGTGGGCGAAGCCTTTTCCCACTTG
GAGGCCGCCGACTGGAATCTTGTGGAGGCTCTAAGTCGCGTGATCCCGCA
CGAGGATGCGCCGCTGACCAGTCCCCATCCTATCCTGGTGCCAGAGCCAC
CGGCCAGGAATGCCGTGGAGAGCACGAATGGCTTCCGTCCGCCTGGCTTT
GATGAAATGCCCGGGACTTCTAACGCGTCCGGTTTCTTTGCGGCCGCCCT
TCAAAACCAGAACCAAAACCTAAACCTAAATCAGCCGCACATCCAGCAAA
GATTTCCAACGTCACAATTGCTAGCCCAGCTGACGTCCAGTATCAACCTG
GACCCCGCGTCCAGCCAAAACAACAACCAAAACGTGATCACCTTCAACAT
CCACTTTAACCAGCAGCTCTACCAGCTCCGTTTACCATCGGAGGCCACAG
TTGAACAACTTAAACGCAAAATCTTTGCCGAGACAAGTGTGCCTGTGTGC
AGGCAAGCCATTCGCGGCTGGCCACCCTCCAAAGCCAGCGATGCACAGCA
GCTGGGCACTCGTTTATGCAACCTAGATCTCTCCCCGGAGAATGAACTGA
TCCTGGTGGACCTCACCGAAGACGGTTTCATGGACACCGAACAGGATGAA
GTGACGCAGCGCGTGGACAAGGACTTCACCATTTTCATACAGTTCGAATC
GGACCCACCACTCACTCTTAGCCTGCCAGGACGTATGACAGTGGCAGAGG
TAAAGATGAACGTGTTCGACATCAAGAGCATACCAGTGCGCCACCAGGAG
TGGACCGGCTGGCCCAACGTTGTGACAATGACACCACTCTGGCGCAATCT
GGCATTGGGCTCTCG
BO04879.5prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 12:13:03
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG8400-PA | 2088 | CG8400-RA | 1..853 | 17..869 | 4215 | 99.7 | Plus |
| CG8400-PB | 2088 | CG8400-RB | 1..853 | 17..869 | 4215 | 99.7 | Plus |
| CG8400-PA | 2088 | CG8400-RA | 854..900 | 869..915 | 235 | 100 | Plus |
| CG8400-PB | 2088 | CG8400-RB | 854..900 | 869..915 | 235 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-11 04:49:11
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| casp-RB | 2557 | CG8400-RB | 122..1021 | 17..915 | 4445 | 99.7 | Plus |
| casp-RA | 2557 | CG8400-RA | 122..1021 | 17..915 | 4445 | 99.7 | Plus |
| casp-RC | 2542 | CG8400-RC | 122..1006 | 17..915 | 4210 | 98 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2015-02-11 04:49:08
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2R | 25286936 | 2R | 16027337..16027572 | 359..124 | 1180 | 100 | Minus |
| 2R | 25286936 | 2R | 16026866..16027057 | 694..503 | 960 | 100 | Minus |
| 2R | 25286936 | 2R | 16026611..16026812 | 894..694 | 930 | 98.5 | Minus |
| 2R | 25286936 | 2R | 16027135..16027278 | 503..360 | 720 | 100 | Minus |
| 2R | 25286936 | 2R | 16027664..16027736 | 125..53 | 365 | 100 | Minus |
| 2R | 25286936 | 2R | 16027884..16027922 | 55..17 | 195 | 100 | Minus |
Blast to na_te.dros performed on 2015-02-11 04:49:10 has no hits.
BO04879.5prime Sim4 Records
Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 02:12:06 Download gff for
BO04879.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG8400-PB | 1..900 | 17..915 | 99 | | Plus |
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 00:29:26 Download gff for
BO04879.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG8400-PB | 1..900 | 17..915 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-23 06:14:01 Download gff for
BO04879.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| casp-RA | 118..1021 | 12..915 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-11 09:20:04 Download gff for
BO04879.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| casp-RA | 118..1021 | 12..915 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-11 09:20:04 Download gff for
BO04879.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2R | 16026611..16026812 | 694..894 | 98 | <- | Minus |
| 2R | 16026867..16027056 | 504..693 | 100 | <- | Minus |
| 2R | 16027135..16027278 | 360..503 | 100 | <- | Minus |
| 2R | 16027337..16027571 | 125..359 | 100 | <- | Minus |
| 2R | 16027665..16027733 | 56..124 | 100 | <- | Minus |
| 2R | 16027884..16027926 | 12..55 | 95 | | Minus |
| 2R | 16026526..16026546 | 895..915 | 100 | <- | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-23 06:14:01 Download gff for
BO04879.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2R | 11914031..11914051 | 895..915 | 100 | <- | Minus |
| arm_2R | 11914116..11914317 | 694..894 | 98 | <- | Minus |
| arm_2R | 11914372..11914561 | 504..693 | 100 | <- | Minus |
| arm_2R | 11914640..11914783 | 360..503 | 100 | <- | Minus |
| arm_2R | 11914842..11915076 | 125..359 | 100 | <- | Minus |
| arm_2R | 11915170..11915238 | 56..124 | 100 | <- | Minus |
| arm_2R | 11915389..11915431 | 12..55 | 95 | | Minus |
BO04879.complete Sequence
2119 bp assembled on 2008-08-14
GenBank Submission: FJ629912
> BO04879.complete
GAAGTTATCAGTCGACATGTCAGAGAACAAGGACGAGGCCTTGACCAGTT
TTCAGAGCATTACGGGCATCGACGATGTGGGCGAAGCCTTTTCCCACTTG
GAGGCCGCCGACTGGAATCTTGTGGAGGCTCTAAGTCGCGTGATCCCGCA
CGAGGATGCGCCGCTGACCAGTCCCCATCCTATCCTGGTGCCAGAGCCAC
CGGCCAGGAATGCCGTGGAGAGCACGAATGGCTTCCGTCCGCCTGGCTTT
GATGAAATGCCCGGGACTTCTAACGCGTCCGGTTTCTTTGCGGCCGCCCT
TCAAAACCAGAACCAAAACCTAAACCTAAATCAGCCGCACATCCAGCAAA
GATTTCCAACGTCACAATTGCTAGCCCAGCTGACGTCCAGTATCAACCTG
GACCCCGCGTCCAGCCAAAACAACAACCAAAACGTGATCACCTTCAACAT
CCACTTTAACCAGCAGCTCTACCAGCTCCGTTTACCATCGGAGGCCACAG
TTGAACAACTTAAACGCAAAATCTTTGCCGAGACAAGTGTGCCTGTGTGC
AGGCAAGCCATTCGCGGCTGGCCACCCTCCAAAGCCAGCGATGCACAGCA
GCTGGGCACTCGTTTATGCAACCTAGATCTCTCCCCGGAGAATGAACTGA
TCCTGGTGGACCTCACCGAAGACGGTTTCATGGACACCGAACAGGATGAA
GTGACGCAGCGCGTGGACAAGGACTTCACCATTTTCATACAGTTCGAATC
GGACCCACCACTCACTCTTAGCCTGCCAGGACGTATGACAGTGCAAGAGG
TAAAGATGAACGTGTTCGACATCAAGAGCATACCAGTGCGCCACCAGGAG
TGGACCGGCTGGCCCAACGGTTGTGACAATGACACCACTCTGGCGCAATC
TGGCATTGGGCTCTCGCATAGATTCGCTGTTCGCAGCACGGAACGATCAG
CGCCAACAAATTCCAATCAGCACAACGCATTCGATGTGGTGACCGTGGAC
AGTGAGAGCTCGACAGATGAGTTCGAAGATGCCACAGACTTCAACAACGC
CGAGTACATATTTACTGACTCGCCACCCGCTCAGCCCCCCAACAGACACT
TAATACCAAACGATACGGATGATGAGATAAGTGGCTCCACGCAGTTTGTC
GAGAACTACAAGGCGCGTTATGGCGAGCCCTGTCCCGAATTTTTTGTGGG
CAGCCTTGAAAACGCCAAGCAGCTGGCCTGCCTTCGATCCGCCAAGGAGC
GCAAGCTGTTGGCCATTTACTTGCATCACGGCAAGAGCATTCTCAGCAAC
GTTTTCTGTGATCAACTGATGAAACATGAGAGCATTATACAAACTTTCAA
AGAGAAGTTTGTTTTATATGGCTGGGATATGACCTACGAGAGCAACAAGG
ACATGTTTCTCTCCTCGTTGACGGCCTGCATTAGCAGCAACGCCTCTCTG
ACGGCCAGAAACATTAAATTGGACAAGCTGCCAGCCATCATGTTGGTTGG
AAAAAGCCGCCAGCTGGGCAGCAATTGCGAAGTTTTATCTGTGATTCATG
GTAACATTGGTCTGGATGACTTGCTTACGAGGCTGATTGAAACATGCGAA
ATGTTTGAGGAGCAGCTTCAGGTGGAAATACGGCAAGAGGACGAACGCGC
TGCCCGTGATCAGGTGAAGGCAGAGCAGGACATGGCCTATCAGGAAACTT
TGCAAGCCGACATGGCTAAGGATGCGGCAAAGCGCCAGAAGGAGGCTGCA
CAATTGGCCGAGCGAAAACGAATGGAGTCCGAGCGGGCCGAAGAAGATGC
TAGACGCGAGTCCATCAGATTAGTTGCTCAACAATCCCTACCTCAGGAGC
CGTCCGAACAGGAAACGGGGACTTCAAAGATCCGAGTGCGTAAGCCCACT
GGCGATTTTCTGGAGCGCCGTTTTTTCATCAACAACAACCTACAGGATCT
GCTCAACTTTGTGACGGCCAATGGTTTCCTCATCGAGGAGTACAAGCTAA
TCAGCAGCTGGCCGCGTCGCGATCTTACGGCCATCGAGAGTAGCCAAACA
TTGGAGTCGCTCAAGCTGTATCCGCAGGAAACGGTCATCCTGGAGGAGCG
AGCAAGCTTTCTAGACCAT
BO04879.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-27 14:44:12
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| casp-RB | 2088 | CG8400-PB | 1..2085 | 17..2101 | 10425 | 100 | Plus |
| casp-RA | 2088 | CG8400-PA | 1..2085 | 17..2101 | 10425 | 100 | Plus |
| casp-RC | 2073 | CG8400-PC | 1..2070 | 17..2101 | 10165 | 99.3 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 14:44:13
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| casp-RB | 2557 | CG8400-RB | 122..2206 | 17..2101 | 10425 | 100 | Plus |
| casp-RA | 2557 | CG8400-RA | 122..2206 | 17..2101 | 10425 | 100 | Plus |
| casp-RC | 2542 | CG8400-RC | 122..2191 | 17..2101 | 10165 | 99.3 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 14:44:09
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2R | 25286936 | 2R | 16025372..16025648 | 1826..1550 | 1385 | 100 | Minus |
| 2R | 25286936 | 2R | 16027337..16027572 | 359..124 | 1180 | 100 | Minus |
| 2R | 25286936 | 2R | 16026339..16026547 | 1103..895 | 1045 | 100 | Minus |
| 2R | 25286936 | 2R | 16026611..16026812 | 895..694 | 1010 | 100 | Minus |
| 2R | 25286936 | 2R | 16026866..16027057 | 694..503 | 960 | 100 | Minus |
| 2R | 25286936 | 2R | 16024979..16025137 | 2101..1943 | 795 | 100 | Minus |
| 2R | 25286936 | 2R | 16025911..16026069 | 1406..1248 | 795 | 100 | Minus |
| 2R | 25286936 | 2R | 16025706..16025854 | 1553..1405 | 745 | 100 | Minus |
| 2R | 25286936 | 2R | 16026135..16026280 | 1249..1104 | 730 | 100 | Minus |
| 2R | 25286936 | 2R | 16027135..16027278 | 503..360 | 720 | 100 | Minus |
| 2R | 25286936 | 2R | 16025190..16025310 | 1946..1826 | 605 | 100 | Minus |
| 2R | 25286936 | 2R | 16027664..16027736 | 125..53 | 365 | 100 | Minus |
| 2R | 25286936 | 2R | 16027884..16027922 | 55..17 | 195 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-27 14:44:11 has no hits.
BO04879.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-11 07:38:47 Download gff for
BO04879.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| casp-RB | 118..2206 | 12..2101 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 18:44:40 Download gff for
BO04879.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| casp-RA | 122..2206 | 17..2103 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-09-04 11:10:42 Download gff for
BO04879.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| casp-RB | 122..2206 | 17..2103 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 15:51:39 Download gff for
BO04879.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| casp-RA | 122..2206 | 17..2103 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 15:51:39 Download gff for
BO04879.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2R | 16027337..16027571 | 125..359 | 100 | <- | Minus |
| 2R | 16027665..16027733 | 56..124 | 100 | <- | Minus |
| 2R | 16027884..16027922 | 17..55 | 100 | | Minus |
| 2R | 16027135..16027278 | 360..503 | 100 | <- | Minus |
| 2R | 16025191..16025310 | 1826..1945 | 100 | <- | Minus |
| 2R | 16025373..16025647 | 1551..1825 | 100 | <- | Minus |
| 2R | 16025709..16025854 | 1405..1550 | 100 | <- | Minus |
| 2R | 16025913..16026067 | 1250..1404 | 100 | <- | Minus |
| 2R | 16026135..16026280 | 1104..1249 | 100 | <- | Minus |
| 2R | 16026339..16026546 | 896..1103 | 100 | <- | Minus |
| 2R | 16026611..16026812 | 694..895 | 100 | <- | Minus |
| 2R | 16026867..16027056 | 504..693 | 100 | <- | Minus |
| 2R | 16024976..16025134 | 1946..2103 | 98 | <- | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 18:44:40 Download gff for
BO04879.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2R | 11915170..11915238 | 56..124 | 100 | <- | Minus |
| arm_2R | 11915389..11915427 | 17..55 | 100 | | Minus |
| arm_2R | 11914842..11915076 | 125..359 | 100 | <- | Minus |
| arm_2R | 11912481..11912639 | 1946..2103 | 98 | <- | Minus |
| arm_2R | 11912696..11912815 | 1826..1945 | 100 | <- | Minus |
| arm_2R | 11912878..11913152 | 1551..1825 | 100 | <- | Minus |
| arm_2R | 11913214..11913359 | 1405..1550 | 100 | <- | Minus |
| arm_2R | 11913418..11913572 | 1250..1404 | 100 | <- | Minus |
| arm_2R | 11913640..11913785 | 1104..1249 | 100 | <- | Minus |
| arm_2R | 11913844..11914051 | 896..1103 | 100 | <- | Minus |
| arm_2R | 11914116..11914317 | 694..895 | 100 | <- | Minus |
| arm_2R | 11914372..11914561 | 504..693 | 100 | <- | Minus |
| arm_2R | 11914640..11914783 | 360..503 | 100 | <- | Minus |
BO04879.pep Sequence
Translation from 16 to 2119
> BO04879.pep
MSENKDEALTSFQSITGIDDVGEAFSHLEAADWNLVEALSRVIPHEDAPL
TSPHPILVPEPPARNAVESTNGFRPPGFDEMPGTSNASGFFAAALQNQNQ
NLNLNQPHIQQRFPTSQLLAQLTSSINLDPASSQNNNQNVITFNIHFNQQ
LYQLRLPSEATVEQLKRKIFAETSVPVCRQAIRGWPPSKASDAQQLGTRL
CNLDLSPENELILVDLTEDGFMDTEQDEVTQRVDKDFTIFIQFESDPPLT
LSLPGRMTVQEVKMNVFDIKSIPVRHQEWTGWPNGCDNDTTLAQSGIGLS
HRFAVRSTERSAPTNSNQHNAFDVVTVDSESSTDEFEDATDFNNAEYIFT
DSPPAQPPNRHLIPNDTDDEISGSTQFVENYKARYGEPCPEFFVGSLENA
KQLACLRSAKERKLLAIYLHHGKSILSNVFCDQLMKHESIIQTFKEKFVL
YGWDMTYESNKDMFLSSLTACISSNASLTARNIKLDKLPAIMLVGKSRQL
GSNCEVLSVIHGNIGLDDLLTRLIETCEMFEEQLQVEIRQEDERAARDQV
KAEQDMAYQETLQADMAKDAAKRQKEAAQLAERKRMESERAEEDARRESI
RLVAQQSLPQEPSEQETGTSKIRVRKPTGDFLERRFFINNNLQDLLNFVT
ANGFLIEEYKLISSWPRRDLTAIESSQTLESLKLYPQETVILEERASFLD
H
BO04879.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 15:14:20
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| casp-PB | 695 | CG8400-PB | 1..695 | 1..695 | 3579 | 100 | Plus |
| casp-PA | 695 | CG8400-PA | 1..695 | 1..695 | 3579 | 100 | Plus |
| casp-PC | 690 | CG8400-PC | 1..690 | 1..695 | 3542 | 99.3 | Plus |
| Faf-PB | 464 | CG10372-PB | 141..423 | 369..670 | 194 | 23.5 | Plus |
| Faf-PA | 464 | CG10372-PA | 141..423 | 369..670 | 194 | 23.5 | Plus |
