Clone BO05015 Report

Search the DGRC for BO05015

Clone and Library Details

Library:BO
Tissue Source:D. melanogaster
Created by:Joe Carlson
Date Registered:2004-06-03
Comments:Infusion clones with open reading frames
Original Plate Number:50
Well:15
Vector:pDNR-Dual
Associated Gene/Transcript
Protein status:BO05015.pep: validated not full length
Sequenced Size:571

Clone Sequence Records

BO05015.5prime Sequence

569 bp (568 high quality bases) assembled on 2005-12-02

> BO05015.5prime
GAAGTTATCAGTCGACATGCTTATAATGGATATACAGACATCGACACATC
ATATCCATGGGCTCGGAACACATGAGCTCCAACATCGTATTTTACATCCA
CACATTCTACATTCAACTCAAGAAGAAACCCTTAATACAAGTACAGGCCA
GCTAGAGCACGATTCCCAACATCTGCAACAACATCACCTCACTCATCATC
AGCAACAGGACGTTTCACCGACTTTGCACAATTTACAAAACACCCGCACT
GGTGATAGCCTGAGCACTACTATTAATACAAATCAAAATCAACATGGTCA
TCAACATCTTTCCGGAAGTAACATGTATACCTCGTCTCAAATGGAAGATA
AGTCAAAAGCGAACAAGTATGATGAGTATTCAAGCCGGACACTGAGCAAC
ATTTCGGATGCCAATACGACGCCATCTGCAAACAATTTCATAACACAATC
CCAAGGAATAGAGTGGATAACAGCCATGAATGATATTCAAAACGGGGCAG
AAGACTCACACAGTTCGCAGGGCAGTATTTCGGGTGATGGTAAGATATTT
CTAGCAAGCTTTCTAGACC

BO05015.5prime Blast Records

Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 12:15:36
Subject Length Description Subject Range Query Range Score Percent Strand
CG11049-PA 2535 sv-RA 1..525 17..541 2625 100 Plus
CG11049-PC 1944 sv-RC 1..525 17..541 2625 100 Plus
CG11049-PD 2043 sv-RD 1..525 17..541 2625 100 Plus
CG11049-PE 2385 sv-RE 1..525 17..541 2625 100 Plus
CG11049-PF 2379 sv-RF 1..525 17..541 2625 100 Plus
CG11049-PG 1887 sv-RG 1..525 17..541 2625 100 Plus
CG11049-PH 2529 sv-RH 1..525 17..541 2625 100 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-13 13:37:58
Subject Length Description Subject Range Query Range Score Percent Strand
sv-RH 4501 CG11049-RH 107..631 17..541 2625 100 Plus
sv-RG 2257 CG11049-RG 293..817 17..541 2625 100 Plus
sv-RF 2749 CG11049-RF 293..817 17..541 2625 100 Plus
Blast to na_all.dmel.RELEASE6 performed 2015-02-13 13:37:56
Subject Length Description Subject Range Query Range Score Percent Strand
4 1348131 4 1092286..1092628 17..359 1715 100 Plus
4 1348131 4 1095574..1095716 358..500 715 100 Plus
4 1348131 4 1095791..1095846 498..553 280 100 Plus
Blast to na_te.dros performed 2015-02-13 13:37:57
Subject Length Description Subject Range Query Range Score Percent Strand
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 1486..1582 117..210 126 61.9 Plus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 2319..2386 138..210 110 65.8 Plus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 6831..6891 150..210 107 63.9 Plus
Doc3-element 4740 Doc3-element DOC3 4740bp 534..639 167..268 106 59.8 Plus

BO05015.5prime Sim4 Records

Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 02:15:16 Download gff for BO05015.5prime
Subject Subject Range Query Range Percent Splice Strand
CG11049-PH 1..525 17..541 100   Plus
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 00:33:58 Download gff for BO05015.5prime
Subject Subject Range Query Range Percent Splice Strand
CG11049-PH 1..525 17..541 100   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-09-02 17:43:57 Download gff for BO05015.5prime
Subject Subject Range Query Range Percent Splice Strand
sv-RF 293..817 17..541 100   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-13 16:03:09 Download gff for BO05015.5prime
Subject Subject Range Query Range Percent Splice Strand
sv-RF 293..817 17..541 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-13 16:03:09 Download gff for BO05015.5prime
Subject Subject Range Query Range Percent Splice Strand
4 1092286..1092628 17..359 100 -> Plus
4 1095576..1095716 360..500 100 -> Plus
4 1095794..1095846 501..553 100   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-09-02 17:43:57 Download gff for BO05015.5prime
Subject Subject Range Query Range Percent Splice Strand
arm_4 1112912..1113254 17..359 100 -> Plus
arm_4 1116202..1116342 360..500 100 -> Plus
arm_4 1116420..1116472 501..553 100   Plus

BO05015.3prime Sequence

569 bp (568 high quality bases) assembled on 2005-12-02

> BO05015.3prime
ATGGTCTAGAAAGCTTGCTAGAAATATCTTACCATCACCCGAAATACTGC
CCTGCGAACTGTGTGAGTCTTCTGCCCCGTTTTGAATATCATTCATGGCT
GTTATCCACTCTATTCCTTGGGATTGTGTTATGAAATTGTTTGCAGATGG
CGTCGTATTGGCATCCGAAATGTTGCTCAGTGTCCGGCTTGAATACTCAT
CATACTTGTTCGCTTTTGACTTATCTTCCATTTGAGACGAGGTATACATG
TTACTTCCGGAAAGATGTTGATGACCATGTTGATTTTGATTTGTATTAAT
AGTAGTGCTCAGGCTATCACCAGTGCGGGTGTTTTGTAAATTGTGCAAAG
TCGGTGAAACGTCCTGTTGCTGATGATGAGTGAGGTGATGTTGTTGCAGA
TGTTGGGAATCGTGCTCTAGCTGGCCTGTACTTGTATTAAGGGTTTCTTC
TTGAGTTGAATGTAGAATGTGTGGATGTAAAATACGATGTTGGAGCTCAT
GTGTTCCGAGCCCATGGATATGATGTGTCGATGTCTGTATATCCATTATA
AGCATGTCGACTGATAACT

BO05015.3prime Blast Records

Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 12:15:35
Subject Length Description Subject Range Query Range Score Percent Strand
CG11049-PA 2535 sv-RA 1..525 555..31 2625 100 Minus
CG11049-PC 1944 sv-RC 1..525 555..31 2625 100 Minus
CG11049-PD 2043 sv-RD 1..525 555..31 2625 100 Minus
CG11049-PE 2385 sv-RE 1..525 555..31 2625 100 Minus
CG11049-PF 2379 sv-RF 1..525 555..31 2625 100 Minus
CG11049-PG 1887 sv-RG 1..525 555..31 2625 100 Minus
CG11049-PH 2529 sv-RH 1..525 555..31 2625 100 Minus
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-04 19:33:51
Subject Length Description Subject Range Query Range Score Percent Strand
sv-RH 4501 CG11049-RH 107..631 555..31 2625 100 Minus
sv-RG 2257 CG11049-RG 293..817 555..31 2625 100 Minus
sv-RF 2749 CG11049-RF 293..817 555..31 2625 100 Minus
Blast to na_all.dmel.RELEASE6 performed 2015-02-04 19:33:45
Subject Length Description Subject Range Query Range Score Percent Strand
4 1348131 4 1092286..1092628 555..213 1715 100 Minus
4 1348131 4 1095574..1095716 214..72 715 100 Minus
4 1348131 4 1095791..1095846 74..19 280 100 Minus
Blast to na_te.dros performed 2015-02-04 19:33:48
Subject Length Description Subject Range Query Range Score Percent Strand
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 1486..1582 455..362 126 61.9 Minus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 2319..2386 434..362 110 65.8 Minus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 6831..6891 422..362 107 63.9 Minus
Doc3-element 4740 Doc3-element DOC3 4740bp 534..639 405..304 106 59.8 Minus

BO05015.3prime Sim4 Records

Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 02:15:15 Download gff for BO05015.3prime
Subject Subject Range Query Range Percent Splice Strand
CG11049-PH 1..525 31..555 100   Minus
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 00:33:56 Download gff for BO05015.3prime
Subject Subject Range Query Range Percent Splice Strand
CG11049-PH 1..525 31..555 100   Minus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-10 21:18:35 Download gff for BO05015.3prime
Subject Subject Range Query Range Percent Splice Strand
sv-RF 293..817 31..555 100   Minus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-04 21:37:26 Download gff for BO05015.3prime
Subject Subject Range Query Range Percent Splice Strand
sv-RF 293..817 31..555 100   Minus
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-04 21:37:26 Download gff for BO05015.3prime
Subject Subject Range Query Range Percent Splice Strand
4 1092286..1092628 213..555 100 -> Minus
4 1095576..1095716 72..212 100 -> Minus
4 1095794..1095846 19..71 100   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-10 21:18:35 Download gff for BO05015.3prime
Subject Subject Range Query Range Percent Splice Strand
arm_4 1112912..1113254 213..555 100 -> Minus
arm_4 1116202..1116342 72..212 100 -> Minus
arm_4 1116420..1116472 19..71 100   Minus

BO05015.complete Sequence

571 bp (571 high quality bases) assembled on 2005-09-13

GenBank Submission: FJ629939

> BO05015.complete
GAAGTTATCAGTCGACATGCTTATAATGGATATACAGACATCGACACATC
ATATCCATGGGCTCGGAACACATGAGCTCCAACATCGTATTTTACATCCA
CACATTCTACATTCAACTCAAGAAGAAACCCTTAATACAAGTACAGGCCA
GCTAGAGCACGATTCCCAACATCTGCAACAACATCACCTCACTCATCATC
AGCAACAGGACGTTTCACCGACTTTGCACAATTTACAAAACACCCGCACT
GGTGATAGCCTGAGCACTACTATTAATACAAATCAAAATCAACATGGTCA
TCAACATCTTTCCGGAAGTAACATGTATACCTCGTCTCAAATGGAAGATA
AGTCAAAAGCGAACAAGTATGATGAGTATTCAAGCCGGACACTGAGCAAC
ATTTCGGATGCCAATACGACGCCATCTGCAAACAATTTCATAACACAATC
CCAAGGAATAGAGTGGATAACAGCCATGAATGATATTCAAAACGGGGCAG
AAGACTCACACAGTTCGCAGGGCAGTATTTCGGGTGATGGTAAGATATTT
CTAGCAAGCTTTCTAGACCAT

BO05015.complete Blast Records

Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-27 20:41:34
Subject Length Description Subject Range Query Range Score Percent Strand
sv-RH 2529 CG11049-PH 1..525 17..541 2625 100 Plus
sv-RG 1887 CG11049-PG 1..525 17..541 2625 100 Plus
sv-RF 2379 CG11049-PF 1..525 17..541 2625 100 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 20:41:35
Subject Length Description Subject Range Query Range Score Percent Strand
sv-RH 4501 CG11049-RH 107..631 17..541 2625 100 Plus
sv-RG 2257 CG11049-RG 293..817 17..541 2625 100 Plus
sv-RF 2749 CG11049-RF 293..817 17..541 2625 100 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 20:41:31
Subject Length Description Subject Range Query Range Score Percent Strand
4 1348131 4 1092286..1092628 17..359 1715 100 Plus
4 1348131 4 1095574..1095716 358..500 715 100 Plus
4 1348131 4 1095791..1095846 498..553 280 100 Plus
Blast to na_te.dros performed 2014-11-27 20:41:33
Subject Length Description Subject Range Query Range Score Percent Strand
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 1486..1582 117..210 126 61.9 Plus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 2319..2386 138..210 110 65.8 Plus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 6831..6891 150..210 107 63.9 Plus
Doc3-element 4740 Doc3-element DOC3 4740bp 534..639 167..268 106 59.8 Plus

BO05015.complete Sim4 Records

Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-21 13:45:53 Download gff for BO05015.complete
Subject Subject Range Query Range Percent Splice Strand
sv-RD 1..525 17..541 100   Plus
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-11 05:04:15 Download gff for BO05015.complete
Subject Subject Range Query Range Percent Splice Strand
sv-RC 273..797 17..541 100   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 19:10:24 Download gff for BO05015.complete
Subject Subject Range Query Range Percent Splice Strand
sv-RF 293..817 17..541 100   Plus
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 13:45:53 Download gff for BO05015.complete
Subject Subject Range Query Range Percent Splice Strand
sv-RC 273..797 17..541 100   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 21:26:27 Download gff for BO05015.complete
Subject Subject Range Query Range Percent Splice Strand
sv-RF 293..817 17..541 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 21:26:27 Download gff for BO05015.complete
Subject Subject Range Query Range Percent Splice Strand
4 1092286..1092628 17..359 100 -> Plus
4 1095576..1095716 360..500 100 -> Plus
4 1095794..1095846 501..555 96   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 19:10:24 Download gff for BO05015.complete
Subject Subject Range Query Range Percent Splice Strand
arm_4 1116420..1116472 501..555 96   Plus
arm_4 1112912..1113254 17..359 100 -> Plus
arm_4 1116202..1116342 360..500 100 -> Plus

BO05015.pep Sequence

Translation from 16 to 571

> BO05015.pep
MLIMDIQTSTHHIHGLGTHELQHRILHPHILHSTQEETLNTSTGQLEHDS
QHLQQHHLTHHQQQDVSPTLHNLQNTRTGDSLSTTINTNQNQHGHQHLSG
SNMYTSSQMEDKSKANKYDEYSSRTLSNISDANTTPSANNFITQSQGIEW
ITAMNDIQNGAEDSHSSQGSISGDGKIFLASFLDH

BO05015.pep Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 01:42:35
Subject Length Description Subject Range Query Range Score Percent Strand
sv-PG 628 CG11049-PG 1..175 1..175 931 100 Plus
sv-PC 647 CG11049-PC 1..175 1..175 931 100 Plus
sv-PD 680 CG11049-PD 1..175 1..175 931 100 Plus
sv-PF 792 CG11049-PF 1..175 1..175 931 100 Plus
sv-PH 842 CG11049-PH 1..175 1..175 931 100 Plus