Clone Sequence Records
BO05023.5prime Sequence
335 bp (334 high quality bases) assembled on 2005-12-02
> BO05023.5prime
GAAGTTATCAGTCGACATGAGCACTTCCGGCGCAGTTGATCAGTACACGG
TGCTAACCGGCGACCGTTCCAAGATCAAGGATTTGCTCTGCAGCCGCCTT
ACGGAATGTGGCTGGCGGGACGAGGTGCGTCTGATGTGCCGCAACATCCT
GATGGAGAAGGGCACCAACAACAGCTTCACCGTAGAGCAGCTGATCGCCG
AGGTAACACCCAAGGCACGCACCCTGGTCCCGGATGCCGTCAAAAAGGAG
CTGCTTATGAAGATACGCACCATTCTCACGGAAATTGAGGAGGAACCCGA
TGAGCCAGAGGACGAATCCGCAAGCTTTCTAGACC
BO05023.5prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 12:15:50
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG15191-PA | 306 | e(y)2-RA | 1..303 | 17..319 | 1515 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-12 01:15:08
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
e(y)2-RA | 503 | CG15191-RA | 143..445 | 17..319 | 1515 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2015-02-12 01:15:03
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
X | 23542271 | X | 11576176..11576478 | 319..17 | 1515 | 100 | Minus |
Blast to na_te.dros performed on 2015-02-12 01:15:06 has no hits.
BO05023.5prime Sim4 Records
Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 02:15:31 Download gff for
BO05023.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
e(y)2-PA | 1..306 | 17..323 | 99 | | Plus |
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 00:34:18 Download gff for
BO05023.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG15191-PA | 1..306 | 17..323 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-28 11:40:00 Download gff for
BO05023.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
e(y)2-RA | 140..452 | 10..328 | 97 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-12 05:18:19 Download gff for
BO05023.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
e(y)2-RA | 140..452 | 10..328 | 97 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-12 05:18:19 Download gff for
BO05023.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
X | 11576169..11576481 | 10..328 | 97 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-28 11:40:00 Download gff for
BO05023.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_X | 11470202..11470514 | 10..328 | 97 | | Minus |
BO05023.3prime Sequence
335 bp (334 high quality bases) assembled on 2005-12-02
> BO05023.3prime
ATGGTCTAGAAAGCTTGCGGATTCGTCCTCTGGCTCATCGGGTTCCTCCT
CAATTTCCGTGAGAATGGTGCGTATCTTCATAAGCAGCTCCTTTTTGACG
GCATCCGGGACCAGGGTGCGTGCCTTGGGTGTTACCTCGGCGATCAGCTG
CTCTACGGTGAAGCTGTTGTTGGTGCCCTTCTCCATCAGGATGTTGCGGC
ACATCAGACGCACCTCGTCCCGCCAGCCACATTCCGTAAGGCGGCTGCAG
AGCAAATCCTTGATCTTGGAACGGTCGCCGGTTAGCACCGTGTACTGATC
AACTGCGCCGGAAGTGCTCATGTCGACTGATAACT
BO05023.3prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 12:15:49
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG15191-PA | 306 | e(y)2-RA | 1..303 | 321..19 | 1515 | 100 | Minus |
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-09 18:43:08
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
e(y)2-RA | 503 | CG15191-RA | 143..445 | 321..19 | 1515 | 100 | Minus |
Blast to na_all.dmel.RELEASE6 performed 2015-02-09 18:43:03
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
X | 23542271 | X | 11576176..11576478 | 19..321 | 1515 | 100 | Plus |
Blast to na_te.dros performed on 2015-02-09 18:43:05 has no hits.
BO05023.3prime Sim4 Records
Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 02:15:30 Download gff for
BO05023.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
e(y)2-PA | 1..306 | 15..321 | 99 | | Minus |
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 00:34:16 Download gff for
BO05023.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG15191-PA | 1..306 | 15..321 | 99 | | Minus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-13 04:00:25 Download gff for
BO05023.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
e(y)2-RA | 140..452 | 10..328 | 97 | | Minus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-09 21:14:06 Download gff for
BO05023.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
e(y)2-RA | 140..452 | 10..328 | 97 | | Minus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-09 21:14:06 Download gff for
BO05023.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
X | 11576169..11576481 | 10..328 | 97 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-13 04:00:25 Download gff for
BO05023.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_X | 11470202..11470514 | 10..328 | 97 | | Plus |
BO05023.complete Sequence
337 bp (337 high quality bases) assembled on 2005-09-13
GenBank Submission: FJ629945
> BO05023.complete
GAAGTTATCAGTCGACATGAGCACTTCCGGCGCAGTTGATCAGTACACGG
TGCTAACCGGCGACCGTTCCAAGATCAAGGATTTGCTCTGCAGCCGCCTT
ACGGAATGTGGCTGGCGGGACGAGGTGCGTCTGATGTGCCGCAACATCCT
GATGGAGAAGGGCACCAACAACAGCTTCACCGTAGAGCAGCTGATCGCCG
AGGTAACACCCAAGGCACGCACCCTGGTCCCGGATGCCGTCAAAAAGGAG
CTGCTTATGAAGATACGCACCATTCTCACGGAAATTGAGGAGGAACCCGA
TGAGCCAGAGGACGAATCCGCAAGCTTTCTAGACCAT
BO05023.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-27 10:45:08
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
e(y)2-RA | 306 | CG15191-PA | 1..303 | 17..319 | 1515 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 10:45:09
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
e(y)2-RA | 503 | CG15191-RA | 143..445 | 17..319 | 1515 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 10:45:07
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
X | 23542271 | X | 11576176..11576478 | 319..17 | 1515 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-27 10:45:08 has no hits.
BO05023.complete Sim4 Records
Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-21 14:05:28 Download gff for
BO05023.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
e(y)2-RA | 1..306 | 17..323 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-11 05:20:24 Download gff for
BO05023.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
e(y)2-RA | 115..427 | 10..328 | 97 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 08:20:52 Download gff for
BO05023.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
e(y)2-RA | 143..445 | 17..321 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 14:05:28 Download gff for
BO05023.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
e(y)2-RA | 115..427 | 10..328 | 97 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 11:29:53 Download gff for
BO05023.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
e(y)2-RA | 143..445 | 17..321 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 11:29:53 Download gff for
BO05023.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
X | 11576174..11576478 | 17..321 | 99 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 08:20:52 Download gff for
BO05023.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_X | 11470207..11470511 | 17..321 | 99 | | Minus |
BO05023.pep Sequence
Translation from 16 to 337
> BO05023.pep
MSTSGAVDQYTVLTGDRSKIKDLLCSRLTECGWRDEVRLMCRNILMEKGT
NNSFTVEQLIAEVTPKARTLVPDAVKKELLMKIRTILTEIEEEPDEPEDE
SASFLDH
BO05023.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 20:47:19
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
e(y)2-PA | 101 | CG15191-PA | 1..101 | 1..101 | 514 | 100 | Plus |
e(y)2b-PB | 95 | CG14612-PB | 18..93 | 11..87 | 181 | 41.6 | Plus |
e(y)2b-PA | 95 | CG14612-PA | 18..93 | 11..87 | 181 | 41.6 | Plus |