Clone Sequence Records
BO05046.3prime Sequence
836 bp (790 high quality bases) assembled on 2005-12-02
> BO05046.3prime
ATGGTCTAGAAAGCTTGCATTATATTTGGGCTTGGTGCGGGCCACTCTTT
TGCCGGTGAACCCCTTGCTGGCCAAATAATCACGGATGCCGCGTTTGGTG
TGCACCTTCAGTTTGCAGATGTCGAACTCCAGCTCCTTGTTGCAGTACTC
GGCGCCCTCCATGCGTTGAATGAAATGGATGACGTGGAGCAGCACCTCGC
CGTCCAGCTGCTGAATCTTGGCGTGCAGATCAAGGTCCTCCTCGGTTGTA
AAGGGCTCCTGCTGCTCCGAAGTTTCCAAAGTTGCCGGCGGAGTCCAATC
GGGGGTCGGAGTACATTCGGTGGTTGGAGTACATGAGGGGGGCGCACCCA
TTATGGAGGGGGACACCTCCGAGCCGTTCACCTCGTCCTCCGGCGATGAT
GAGTCCGATTCATCCGAGGAGCTCTCTTCCTCGGCACGCACTTTACTGCC
GCTGGAGCAGATGTAGAGCTGCACCTGGGAGTACATCTCCTCAAAGATGA
TCTGCAGCTGTTTGGCCATGTGGTAGCACAGGTGATCGGGATTCGTGTAC
AGATAGGTGTTGTAGAAAATCAGCCTTATGTCTTTGGCGAAATCCGCGGC
ACTGAGATAGCAACCCGTATTCAAACGATGCCTCACGGTGGACAGATCCA
TGGGTTCCCGGACAATCTCATGGTAATCGTGGAGGCCCAGCAGTTGCGGA
TCCAGTGGCTCGTAGAAAACCCAAGCAATATTCTTATAGGTACTGGAAAA
CAACCTTTTAATAATCACCTTGCAGGCATTAATTTCCGGCGAGGACCGTT
CAGTTTCTTGTTTTGCAGCCATGTCGACTGATAACT
BO05046.3prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 12:16:17
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG30417-PA | 807 | CG30417-RA | 1..804 | 822..19 | 4020 | 100 | Minus |
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-13 01:31:52
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG30417-RA | 843 | CG30417-RA | 26..829 | 822..19 | 4020 | 100 | Minus |
Blast to na_all.dmel.RELEASE6 performed 2015-02-13 01:31:45
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
2R | 25286936 | 2R | 23326753..23327556 | 19..822 | 4020 | 100 | Plus |
Blast to na_te.dros performed on 2015-02-13 01:31:49 has no hits.
BO05046.3prime Sim4 Records
Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 02:16:06 Download gff for
BO05046.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG30417-PA | 1..807 | 16..822 | 99 | | Minus |
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 00:35:09 Download gff for
BO05046.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG30417-PA | 1..807 | 16..822 | 99 | | Minus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-31 20:08:55 Download gff for
BO05046.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG30417-RA | 20..837 | 9..831 | 99 | | Minus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-13 03:20:24 Download gff for
BO05046.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG30417-RA | 20..837 | 9..831 | 99 | | Minus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-13 03:20:24 Download gff for
BO05046.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
2R | 23326745..23327562 | 9..831 | 99 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-31 20:08:55 Download gff for
BO05046.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_2R | 19214268..19215085 | 9..831 | 99 | | Plus |
BO05046.5prime Sequence
836 bp (793 high quality bases) assembled on 2005-12-02
> BO05046.5prime
GAAGTTATCAGTCGACATGGCTGCAAAACAAGAAACTGAACGGTCCTCGC
CGGAAATTAATGCCTGCAAGGTGATTATTAAAAGGTTGTTTTCCAGTACC
TATAAGAATATTGCTTGGGTTTTCTACGAGCCACTGGATCCGCAACTGCT
GGGCCTCCACGATTACCATGAGATTGTCCGGGAACCCATGGATCTGTCCA
CCGTGAGGCATCGTTTGAATACGGGTTGCTATCTCAGTGCCGCGGATTTC
GCCAAAGACATAAGGCTGATTTTCTACAACACCTATCTGTACACGAATCC
CGATCACCTGTGCTACCACATGGCCAAACAGCTGCAGATCATCTTTGAGG
AGATGTACTCCCAGGTGCAGCTCTACATCTGCTCCAGCGGCAGTAAAGTG
CGTGCCGAGGAAGAGAGCTCCTCGGATGAATCGGACTCATCATCGCCGGA
GGACGAGGTGAACGGCTCGGAGGTGTCCCCCTCCATAATGGGTGCGCCCC
CCTCATGTACTCCAACCACCGAATGTACTCCGACCCCCGATTGGACTCCG
CCGGCAACTTTGGAAACTTCGGAGCAGCAGGAGCCCTTTACAACCGAGGA
GGACCTTGATCTGCACGCCAAGATTCAGCAGCTGGACGGCGAGGTGCTGC
TCCACGTCATCCATTTCATTCAACGCATGGAGGGCGCCGAGTACTGCAAC
AAGGAGCTGGAGTTCGACATCTGCAAACTGAAGGTGCACACCAAACGCGG
CATCCGTGATTATTTGGCCAGCAAGGGGTTCACCGGCAAAAGAGTGGCCC
GCACCAAGCCCAAATATAATGCAAGCTTTCTAGACC
BO05046.5prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 12:16:17
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG30417-PA | 807 | CG30417-RA | 1..804 | 17..820 | 4020 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-13 05:42:23
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG30417-RA | 843 | CG30417-RA | 26..829 | 17..820 | 4020 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2015-02-13 05:42:21
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
2R | 25286936 | 2R | 23326753..23327556 | 820..17 | 4020 | 100 | Minus |
Blast to na_te.dros performed on 2015-02-13 05:42:22 has no hits.
BO05046.5prime Sim4 Records
Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 02:16:07 Download gff for
BO05046.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG30417-PA | 1..807 | 17..823 | 99 | | Plus |
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 00:35:10 Download gff for
BO05046.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG30417-PA | 1..807 | 17..823 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-09-01 17:55:33 Download gff for
BO05046.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG30417-RA | 20..837 | 8..830 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-13 07:59:25 Download gff for
BO05046.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG30417-RA | 20..837 | 8..830 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-13 07:59:25 Download gff for
BO05046.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
2R | 23326745..23327562 | 8..830 | 99 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-09-01 17:55:33 Download gff for
BO05046.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_2R | 19214268..19215085 | 8..830 | 99 | | Minus |
BO05046.complete Sequence
838 bp (838 high quality bases) assembled on 2005-09-13
GenBank Submission: FJ629956
> BO05046.complete
GAAGTTATCAGTCGACATGGCTGCAAAACAAGAAACTGAACGGTCCTCGC
CGGAAATTAATGCCTGCAAGGTGATTATTAAAAGGTTGTTTTCCAGTACC
TATAAGAATATTGCTTGGGTTTTCTACGAGCCACTGGATCCGCAACTGCT
GGGCCTCCACGATTACCATGAGATTGTCCGGGAACCCATGGATCTGTCCA
CCGTGAGGCATCGTTTGAATACGGGTTGCTATCTCAGTGCCGCGGATTTC
GCCAAAGACATAAGGCTGATTTTCTACAACACCTATCTGTACACGAATCC
CGATCACCTGTGCTACCACATGGCCAAACAGCTGCAGATCATCTTTGAGG
AGATGTACTCCCAGGTGCAGCTCTACATCTGCTCCAGCGGCAGTAAAGTG
CGTGCCGAGGAAGAGAGCTCCTCGGATGAATCGGACTCATCATCGCCGGA
GGACGAGGTGAACGGCTCGGAGGTGTCCCCCTCCATAATGGGTGCGCCCC
CCTCATGTACTCCAACCACCGAATGTACTCCGACCCCCGATTGGACTCCG
CCGGCAACTTTGGAAACTTCGGAGCAGCAGGAGCCCTTTACAACCGAGGA
GGACCTTGATCTGCACGCCAAGATTCAGCAGCTGGACGGCGAGGTGCTGC
TCCACGTCATCCATTTCATTCAACGCATGGAGGGCGCCGAGTACTGCAAC
AAGGAGCTGGAGTTCGACATCTGCAAACTGAAGGTGCACACCAAACGCGG
CATCCGTGATTATTTGGCCAGCAAGGGGTTCACCGGCAAAAGAGTGGCCC
GCACCAAGCCCAAATATAATGCAAGCTTTCTAGACCAT
BO05046.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-27 07:24:25
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG30417-RA | 807 | CG30417-PA | 1..804 | 17..820 | 4020 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 07:24:26
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG30417-RA | 843 | CG30417-RA | 26..829 | 17..820 | 4020 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 07:24:22
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
2R | 25286936 | 2R | 23326753..23327556 | 820..17 | 4020 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-27 07:24:24 has no hits.
BO05046.complete Sim4 Records
Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-21 22:36:29 Download gff for
BO05046.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG30417-RA | 1..807 | 17..823 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-11 07:04:28 Download gff for
BO05046.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG30417-RA | 1..807 | 17..823 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 05:14:16 Download gff for
BO05046.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG30417-RA | 26..829 | 17..822 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 22:36:29 Download gff for
BO05046.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG30417-RA | 1..807 | 17..823 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 08:09:59 Download gff for
BO05046.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG30417-RA | 26..829 | 17..822 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 08:09:59 Download gff for
BO05046.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
2R | 23326750..23327556 | 17..822 | 99 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 05:14:16 Download gff for
BO05046.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_2R | 19214273..19215079 | 17..822 | 99 | | Minus |
BO05046.pep Sequence
Translation from 16 to 838
> BO05046.pep
MAAKQETERSSPEINACKVIIKRLFSSTYKNIAWVFYEPLDPQLLGLHDY
HEIVREPMDLSTVRHRLNTGCYLSAADFAKDIRLIFYNTYLYTNPDHLCY
HMAKQLQIIFEEMYSQVQLYICSSGSKVRAEEESSSDESDSSSPEDEVNG
SEVSPSIMGAPPSCTPTTECTPTPDWTPPATLETSEQQEPFTTEEDLDLH
AKIQQLDGEVLLHVIHFIQRMEGAEYCNKELEFDICKLKVHTKRGIRDYL
ASKGFTGKRVARTKPKYNASFLDH
BO05046.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 18:41:57
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG30417-PA | 268 | CG30417-PA | 1..268 | 1..268 | 1423 | 100 | Plus |
fs(1)h-PH | 1105 | CG2252-PH | 463..579 | 1..117 | 290 | 43.6 | Plus |
fs(1)h-PF | 1110 | CG2252-PF | 468..584 | 1..117 | 290 | 43.6 | Plus |
fs(1)h-PE | 1110 | CG2252-PE | 468..584 | 1..117 | 290 | 43.6 | Plus |
fs(1)h-PD | 1110 | CG2252-PD | 468..584 | 1..117 | 290 | 43.6 | Plus |
fs(1)h-PH | 1105 | CG2252-PH | 30..133 | 8..110 | 178 | 33.7 | Plus |
fs(1)h-PF | 1110 | CG2252-PF | 30..133 | 8..110 | 178 | 33.7 | Plus |
fs(1)h-PE | 1110 | CG2252-PE | 30..133 | 8..110 | 178 | 33.7 | Plus |