Clone Sequence Records
BO05051.3prime Sequence
965 bp (854 high quality bases) assembled on 2005-12-02
> BO05051.3prime
ATGGTCTAGAAAGCTTGCCTCATCTTCTCCCACTGAACCCTTTATGATTC
CTTTACCATAATAAGCAGTGAGCGCAACCATTCGGGTGTCCAGATAGTTG
TGCTCCACCTCGCACTGCTGCCCAACTCCACTTAGAGCGACCACCTGCTT
CATATTGGCGTTGCGTGGCAGAAAGAAAGCTACGTCAGATGCCAGGCTAC
GGGACAGCTGCATCAGTTGGCTAGCACCCACGGGCAGGAGACCTGTTTCG
ATATCAAAGGTGGCCTGCTTTTGGTAGTCAGGACCACCCCACGGAGGGCT
CAGGAAAACCACATTTGGGCGCAGCTTTGTGCTGGCCGCAAACTGCAGAA
AATCGGCGTGGATAAACTCGATCTTATGGGCCACACCATAAATGCCGGCA
TTATGCTTGGCCATGGCCAACTTCTCGGCATCGATGTCCACAGCAATTAC
GCGTCCACAGGTGTTTGCAAACTGAATGGCATTGCCGCCGCATCCACAGA
AAGCATCTACGATCACGTCGCAGGCCAGTCGTCGGGCCGTTTGTTTGGCA
ATCTTCTCGGGTGTCACCGAGAACCAGCTCTCGCGGTCCAGCCGAATGCC
CTGATCGAAGCGGGAGAACAGCGAGAATCGCTTGACCCAGTACTTGACCA
TTTTGTTGTTATCCTCTTGCATGCACTCTGGCATCCTGGCCTTGAGTTTT
TTTATTTGCCTTTGCCGTCGTTTTTTCTTTTTAACAGAACCGCTCTGAAC
GCCGTGCAGAGCCTCGTTTTCGTTGTTCTCCATGGTCAACAGATCATGAT
CGTCCTCGCTATCGCTGCTAGATAGTTCGTACTGTGTCTTTCTTTCCTTT
CTATAATTAATTATATCTGCCTTCGACGCAAATGATGTTGGCAATCCGAG
AAGGCGCAGCTGTTGTTCCTCGTCACAATCCTCGGGATCGTCGTTGGCAG
TCAAGGATGATTCCT
BO05051.3prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 12:16:21
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG31241-PA | 1476 | CG31241-RA | 529..1473 | 963..19 | 4700 | 99.8 | Minus |
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-11 04:50:32
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Tgs1-RB | 2089 | CG44890-RB | 1073..2017 | 963..19 | 4710 | 99.9 | Minus |
| moi-RA | 2089 | CG42350-RA | 1073..2017 | 963..19 | 4710 | 99.9 | Minus |
Blast to na_all.dmel.RELEASE6 performed 2015-02-11 04:50:28
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3R | 32079331 | 3R | 18256661..18257605 | 963..19 | 4710 | 99.9 | Minus |
Blast to na_te.dros performed on 2015-02-11 04:50:30 has no hits.
BO05051.3prime Sim4 Records
Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 02:16:12 Download gff for
BO05051.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG31241-PA | 527..1476 | 18..965 | 99 | | Minus |
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 00:35:17 Download gff for
BO05051.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG31241-PA | 527..1476 | 18..965 | 99 | | Minus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-23 06:14:22 Download gff for
BO05051.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Tgs1-RB | 1071..2024 | 11..965 | 99 | | Minus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-11 09:24:47 Download gff for
BO05051.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| moi-RA | 1071..2024 | 11..965 | 99 | | Minus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-11 09:24:47 Download gff for
BO05051.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3R | 18256659..18257609 | 14..965 | 99 | -> | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-23 06:14:22 Download gff for
BO05051.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3R | 14082381..14083331 | 14..965 | 99 | -> | Minus |
BO05051.5prime Sequence
889 bp (803 high quality bases) assembled on 2005-12-02
> BO05051.5prime
GAAGTTATCAGTCGACATGGTACATCCAGGTCATCGACAGAGCCGAGGAC
TTGCTGACTCGCAGGCTGGAGATGAGAAGTCTGATCGAGAAATGAACACA
CACCACCTGACCACCTCGCGAACCAATCCGCAGTTCTATATATTCAGTCA
GCTCTTTGGTAACGATTTCGACTGGAATAATTGCAATTGGGGGGGCATTC
AAAACGTTACCTGGAAAGAATTCTGGCAGCGTGAGGGGCATGAGCTGCTC
GAGCAAAAGTGGCACAAGCGGTTTCCCGAATACAAAGATCTTATCGAGGT
GGTTTCGTCGGAGGAGCAAGGCCTTTGGCAGGAACTGTGGGAGAAGCACG
CCAGCGATTACAGTGAAAAGTTCTGGTATATATTTAGCTGTGCCTTTGAG
AACTACCAACACGATTTGGCCAAATCATTTGGCCTTGACGTCGCTGAAAA
CTCAGAAGATGTTGAGGAGGACTTGCAGAACCTAAGCCTTACAAATAAGC
CAATAAAATCGAAACAGCAAAGGGTCACAGAGAAAGAGGAGGACGAATCA
TACTTGACTGCCAACGACGATCCCGAGGATTGTGACGAGGAACAACAGCT
GCGCCTTCTCGGATTGCCAACATCATTTGCGTCGAAGGCAGATATAATTA
ATTATAGAAAGGAAAGAAAGACACAGTACGAACTATCTAGCAGCGATAGC
GAGGACGATCATGATCTGTTGACCATGGAGAACAACGAAAACGAGGCTCT
GCACGGCGTTCAGAGCGGTTCTGTTAAAAAGAAAAAACGACGGCAAAGGC
AAATAAAAAAACTCAAGGCCAGGATGCCAGAGTGCATGGCAGAGGATAAC
AACAAAATGGTCAAGTACTGGGGTCAGCGATTCTCGCTG
BO05051.5prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 12:16:22
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG31241-PA | 1476 | CG31241-RA | 1..856 | 17..872 | 4230 | 99.7 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-10 17:29:42
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Tgs1-RB | 2089 | CG44890-RB | 545..1417 | 17..889 | 4290 | 99.5 | Plus |
| moi-RA | 2089 | CG42350-RA | 545..1417 | 17..889 | 4290 | 99.5 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2015-02-10 17:29:35
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3R | 32079331 | 3R | 18256133..18257005 | 17..889 | 4290 | 99.4 | Plus |
Blast to na_te.dros performed on 2015-02-10 17:29:38 has no hits.
BO05051.5prime Sim4 Records
Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 02:16:13 Download gff for
BO05051.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG31241-PA | 1..873 | 17..889 | 99 | | Plus |
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 00:35:18 Download gff for
BO05051.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG31241-PA | 1..873 | 17..889 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-15 05:52:17 Download gff for
BO05051.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Tgs1-RB | 536..1417 | 9..889 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-10 18:27:18 Download gff for
BO05051.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| moi-RA | 536..1417 | 9..889 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-10 18:27:18 Download gff for
BO05051.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3R | 18256124..18257005 | 9..889 | 99 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-15 05:52:17 Download gff for
BO05051.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3R | 14081846..14082727 | 9..889 | 99 | | Plus |
BO05051.complete Sequence
1507 bp (1507 high quality bases) assembled on 2005-09-13
GenBank Submission: FJ629958
> BO05051.complete
GAAGTTATCAGTCGACATGGTACATCCAGGTCATCGACAGAGCCGAGGAC
TTGCTGACTCGCAGGCTGGAGATGAGAAGTCTGATCGAGAAATGAACACA
CACCACCTGACCACCTCGCGAACCAATCCGCAGTTCTATATATTCAGTCA
GCTCTTTGGTAACGATTTCGACTGGAATAATTGCAATTGGGGGGGCATTC
AAAACGTTACCTGGAAAGAATTCTGGCAGCGTGAGGGGCATGAGCTGCTC
GAGCAAAAGTGGCACAAGCGGTTTCCCGAATACAAAGATCTTATCGAGGT
GGTTTCGTCGGAGGAGCAAGGCCTTTGGCAGGAACTGTGGGAGAAGCACG
CCAGCGATTACAGTGAAAAGTTCTGGTATATATTTAGCTGTGCCTTTGAG
AACTACCAACACGATTTGGCCAAATCATTTGGCCTTGACGTCGCTGAAAA
CTCAGAAGATGTTGAGGAGGACTTGCAGAACCTAAGCCTTACAAATAAGC
CAATAAAATCGAAACAGCAAAGGGTCACAGAGAAAGAGGAGGACGAATCA
TACTTGACTGCCAACGACGATCCCGAGGATTGTGACGAGGAACAACAGCT
GCGCCTTCTCGGATTGCCAACATCATTTGCGTCGAAGGCAGATATAATTA
ATTATAGAAAGGAAAGAAAGACACAGTACGAACTATCTAGCAGCGATAGC
GAGGACGATCATGATCTGTTGACCATGGAGAACAACGAAAACGAGGCTCT
GCACGGCGTTCAGAGCGGTTCTGTTAAAAAGAAAAAACGACGGCAAAGGC
AAATAAAAAAACTCAAGGCCAGGATGCCAGAGTGCATGCAAGAGGATAAC
AACAAAATGGTCAAGTACTGGGTCAAGCGATTCTCGCTGTTCTCCCGCTT
CGATCAGGGCATTCGGCTGGACCGCGAGAGCTGGTTCTCGGTGACACCCG
AGAAGATTGCCAAACAAACGGCCCGACGACTGGCCTGCGACGTGATCGTA
GATGCTTTCTGTGGATGCGGCGGCAATGCCATTCAGTTTGCAAACACCTG
TGGACGCGTAATTGCTGTGGACATCGATGCCGAGAAGTTGGCCATGGCCA
AGCATAATGCCGGCATTTATGGTGTGGCCCATAAGATCGAGTTTATCCAC
GCCGATTTTCTGCAGTTTGCGGCCAGCACAAAGCTGCGCCCAAATGTGGT
TTTCCTGAGCCCTCCGTGGGGTGGTCCTGACTACCAAAAGCAGGCCACCT
TTGATATCGAAACAGGTCTCCTGCCCGTGGGTGCTAGCCAACTGATGCAG
CTGTCCCGTAGCCTGGCATCTGACGTAGCTTTCTTTCTGCCACGCAACGC
CAATATGAAGCAGGTGGTCGCTCTAAGTGGAGTTGGGCAGCAGTGCGAGG
TGGAGCACAACTATCTGGACACCCGAATGGTTGCGCTCACTGCTTATTAT
GGTAAAGGAATCATAAAGGGTTCAGTGGGAGAAGATGAGGCAAGCTTTCT
AGACCAT
BO05051.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-26 21:42:54
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Tgs1-RB | 1401 | CG44890-PB | 1..1398 | 92..1489 | 6990 | 100 | Plus |
| moi-RA | 537 | CG42350-PA | 459..537 | 17..95 | 395 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-26 21:42:54
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Tgs1-RB | 2089 | CG44890-RB | 545..2017 | 17..1489 | 7365 | 100 | Plus |
| moi-RA | 2089 | CG42350-RA | 545..2017 | 17..1489 | 7365 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-26 21:42:52
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3R | 32079331 | 3R | 18256133..18257605 | 17..1489 | 7365 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-26 21:42:52 has no hits.
BO05051.complete Sim4 Records
Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-21 22:36:30 Download gff for
BO05051.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG31241-RB | 1..1401 | 92..1490 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-11 07:04:29 Download gff for
BO05051.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG42350-RA | 518..2006 | 9..1497 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 03:34:33 Download gff for
BO05051.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Tgs1-RB | 545..2017 | 17..1491 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 22:36:31 Download gff for
BO05051.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG42350-RA | 518..2006 | 9..1497 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 22:40:22 Download gff for
BO05051.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| moi-RA | 545..2017 | 17..1491 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-26 22:40:22 Download gff for
BO05051.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3R | 18256133..18257605 | 17..1491 | 99 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 03:34:33 Download gff for
BO05051.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3R | 14081855..14083327 | 17..1491 | 99 | | Plus |
BO05051.pep Sequence
Translation from 16 to 1507
> BO05051.pep
MVHPGHRQSRGLADSQAGDEKSDREMNTHHLTTSRTNPQFYIFSQLFGND
FDWNNCNWGGIQNVTWKEFWQREGHELLEQKWHKRFPEYKDLIEVVSSEE
QGLWQELWEKHASDYSEKFWYIFSCAFENYQHDLAKSFGLDVAENSEDVE
EDLQNLSLTNKPIKSKQQRVTEKEEDESYLTANDDPEDCDEEQQLRLLGL
PTSFASKADIINYRKERKTQYELSSSDSEDDHDLLTMENNENEALHGVQS
GSVKKKKRRQRQIKKLKARMPECMQEDNNKMVKYWVKRFSLFSRFDQGIR
LDRESWFSVTPEKIAKQTARRLACDVIVDAFCGCGGNAIQFANTCGRVIA
VDIDAEKLAMAKHNAGIYGVAHKIEFIHADFLQFAASTKLRPNVVFLSPP
WGGPDYQKQATFDIETGLLPVGASQLMQLSRSLASDVAFFLPRNANMKQV
VALSGVGQQCEVEHNYLDTRMVALTAYYGKGIIKGSVGEDEASFLDH
BO05051.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 18:41:56
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Tgs1-PB | 466 | CG44890-PB | 1..466 | 26..491 | 2480 | 100 | Plus |
