Clone BO05063 Report

Search the DGRC for BO05063

Clone and Library Details

Library:BO
Tissue Source:D. melanogaster
Created by:Joe Carlson
Date Registered:2004-06-03
Comments:Infusion clones with open reading frames
Original Plate Number:50
Well:63
Vector:pDNR-Dual
Associated Gene/TranscriptCG4318-RB
Protein status:BO05063.pep: validated full length
Sequenced Size:742

Clone Sequence Records

BO05063.3prime Sequence

740 bp (739 high quality bases) assembled on 2005-12-02

> BO05063.3prime
ATGGTCTAGAAAGCTTGCATTATGGTGCATGGTCTCGTGGTTCTTAAGGG
CAGAGTTTCTGTTGAAGATCTTGGGGCATCGGGAACACTTGTAGGATCGT
AATTCAGGTCTCGAACTATGTACGCGCTCATGGCGCCTAAGACCGCGGAT
TTGTGCGTAGGACTGGGAGCATTGTAAGCATTTGTAAGGTTTTTCACGCG
CATGGACCCACATGTGACACTTAAGGTGCGCAGGTAACATGAAATACTTC
CCGCAAATGTTACATTTATGTGTCTTCTTCAGCATTTTCTTCTTGGTATC
CTTCTGGGCGCTGCTCTGGCTCACATTGCCATTCCCGTTGGAGTTTGAGT
TGGGGCACATATTCTCCACGTTGTCCCCCGGTGAATCGATTGTCAAGTCA
ATTGTCTCCATCTCCTGGCTGCCATCGACTGGCTCAATCAGTTCAACATC
GGAGTCATTCGATCCTTCTTCCTCATAATTCATCTCACTGACCACCATCT
CATCCTGCTCAATCACCTGCACGCTGTCCATCCCGTAAGCAGTCTGCGCA
TCCAGCGCACAAGACTGGCAAATGGTCTTGGGAAAAGGATCCTTCGGTAG
AACCGGGAAGCCGCACCAATCGGAAATCATGGTCGCTAGGGAAACGCCGG
GTAGCGGCATCGTTTCGAAGATGCATAGCATGTTCTCCATCTCCCTCAAA
CAGACACGGCACATCCTGGAATCCATGTCGACTGATAACT

BO05063.3prime Blast Records

Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 12:16:36
Subject Length Description Subject Range Query Range Score Percent Strand
CG4318-PA 699 CG4318-RA 1..696 714..19 3480 100 Minus
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-13 01:36:02
Subject Length Description Subject Range Query Range Score Percent Strand
CG4318-RB 1464 CG4318-RB 65..772 726..19 3540 100 Minus
CG4318-RB 1464 CG4318-RB 950..1030 99..19 375 97.5 Minus
CG4318-RB 1464 CG4318-RB 1036..1116 99..19 375 97.5 Minus
CG4318-RB 1464 CG4318-RB 1122..1202 99..19 375 97.5 Minus
CG4318-RB 1464 CG4318-RB 778..858 99..19 375 97.5 Minus
CG4318-RB 1464 CG4318-RB 864..944 99..19 375 97.5 Minus
CG4318-RB 1464 CG4318-RB 1208..1282 99..25 345 97.3 Minus
Blast to na_all.dmel.RELEASE6 performed 2015-02-13 01:35:55
Subject Length Description Subject Range Query Range Score Percent Strand
X 23542271 X 13154153..13154860 19..726 3540 100 Plus
X 23542271 X 13153723..13153803 19..99 375 97.5 Plus
X 23542271 X 13153809..13153889 19..99 375 97.5 Plus
X 23542271 X 13153895..13153975 19..99 375 97.5 Plus
X 23542271 X 13153981..13154061 19..99 375 97.5 Plus
X 23542271 X 13154067..13154147 19..99 375 97.5 Plus
X 23542271 X 13153643..13153717 25..99 345 97.3 Plus
Blast to na_te.dros performed on 2015-02-13 01:35:59 has no hits.

BO05063.3prime Sim4 Records

Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 02:16:29 Download gff for BO05063.3prime
Subject Subject Range Query Range Percent Splice Strand
CG4318-PA 1..699 15..714 99   Minus
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 00:35:45 Download gff for BO05063.3prime
Subject Subject Range Query Range Percent Splice Strand
CG4318-PA 1..699 15..714 99   Minus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-31 20:09:10 Download gff for BO05063.3prime
Subject Subject Range Query Range Percent Splice Strand
CG4318-RB 57..775 15..737 99   Minus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-13 03:18:40 Download gff for BO05063.3prime
Subject Subject Range Query Range Percent Splice Strand
CG4318-RB 57..775 15..737 99   Minus
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-13 03:18:40 Download gff for BO05063.3prime
Subject Subject Range Query Range Percent Splice Strand
X 13154150..13154868 15..737 99   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-31 20:09:10 Download gff for BO05063.3prime
Subject Subject Range Query Range Percent Splice Strand
arm_X 13048183..13048901 15..737 99   Plus

BO05063.5prime Sequence

740 bp (739 high quality bases) assembled on 2005-12-02

> BO05063.5prime
GAAGTTATCAGTCGACATGGATTCCAGGATGTGCCGTGTCTGTTTGAGGG
AGATGGAGAACATGCTATGCATCTTCGAAACGATGCCGCTACCCGGCGTT
TCCCTAGCGACCATGATTTCCGATTGGTGCGGCTTCCCGGTTCTACCGAA
GGATCCTTTTCCCAAGACCATTTGCCAGTCTTGTGCGCTGGATGCGCAGA
CTGCTTACGGGATGGACAGCGTGCAGGTGATTGAGCAGGATGAGATGGTG
GTCAGTGAGATGAATTATGAGGAAGAAGGATCGAATGACTCCGATGTTGA
ACTGATTGAGCCAGTCGATGGCAGCCAGGAGATGGAGACAATTGACTTGA
CAATCGATTCACCGGGGGACAACGTGGAGAATATGTGCCCCAACTCAAAC
TCCAACGGGAATGGCAATGTGAGCCAGAGCAGCGCCCAGAAGGATACCAA
GAAGAAAATGCTGAAGAAGACACATAAATGTAACATTTGCGGGAAGTATT
TCATGTTACCTGCGCACCTTAAGTGTCACATGTGGGTCCATGCGCGTGAA
AAACCTTACAAATGCTTACAATGCTCCCAGTCCTACGCACAAATCCGCGG
TCTTAGGCGCCATGAGCGCGTACATAGTTCGAGACCTGAATTACGATCCT
ACAAGTGTTCCCGATGCCCCAAGATCTTCAACAGAAACTCTGCCCTTAAG
AACCACGAGACCATGCACCATAATGCAAGCTTTCTAGACC

BO05063.5prime Blast Records

Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 12:16:36
Subject Length Description Subject Range Query Range Score Percent Strand
CG4318-PA 699 CG4318-RA 1..696 29..724 3480 100 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-09 18:44:14
Subject Length Description Subject Range Query Range Score Percent Strand
CG4318-RB 1464 CG4318-RB 65..772 17..724 3540 100 Plus
CG4318-RB 1464 CG4318-RB 778..858 644..724 375 97.5 Plus
CG4318-RB 1464 CG4318-RB 864..944 644..724 375 97.5 Plus
CG4318-RB 1464 CG4318-RB 950..1030 644..724 375 97.5 Plus
CG4318-RB 1464 CG4318-RB 1036..1116 644..724 375 97.5 Plus
CG4318-RB 1464 CG4318-RB 1122..1202 644..724 375 97.5 Plus
CG4318-RB 1464 CG4318-RB 1208..1282 644..718 345 97.3 Plus
Blast to na_all.dmel.RELEASE6 performed 2015-02-09 18:44:08
Subject Length Description Subject Range Query Range Score Percent Strand
X 23542271 X 13154153..13154860 724..17 3540 100 Minus
X 23542271 X 13153723..13153803 724..644 375 97.5 Minus
X 23542271 X 13153809..13153889 724..644 375 97.5 Minus
X 23542271 X 13153895..13153975 724..644 375 97.5 Minus
X 23542271 X 13153981..13154061 724..644 375 97.5 Minus
X 23542271 X 13154067..13154147 724..644 375 97.5 Minus
X 23542271 X 13153643..13153717 718..644 345 97.3 Minus
Blast to na_te.dros performed on 2015-02-09 18:44:11 has no hits.

BO05063.5prime Sim4 Records

Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 02:16:30 Download gff for BO05063.5prime
Subject Subject Range Query Range Percent Splice Strand
CG4318-PA 1..699 29..728 99   Plus
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 00:35:46 Download gff for BO05063.5prime
Subject Subject Range Query Range Percent Splice Strand
CG4318-PA 1..699 29..728 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-13 04:00:36 Download gff for BO05063.5prime
Subject Subject Range Query Range Percent Splice Strand
CG4318-RB 57..775 6..728 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-09 21:14:14 Download gff for BO05063.5prime
Subject Subject Range Query Range Percent Splice Strand
CG4318-RB 57..775 6..728 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-09 21:14:14 Download gff for BO05063.5prime
Subject Subject Range Query Range Percent Splice Strand
X 13154150..13154868 6..728 99   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-13 04:00:36 Download gff for BO05063.5prime
Subject Subject Range Query Range Percent Splice Strand
arm_X 13048183..13048901 6..728 99   Minus

BO05063.complete Sequence

742 bp (742 high quality bases) assembled on 2005-09-13

GenBank Submission: FJ629965

> BO05063.complete
GAAGTTATCAGTCGACATGGATTCCAGGATGTGCCGTGTCTGTTTGAGGG
AGATGGAGAACATGCTATGCATCTTCGAAACGATGCCGCTACCCGGCGTT
TCCCTAGCGACCATGATTTCCGATTGGTGCGGCTTCCCGGTTCTACCGAA
GGATCCTTTTCCCAAGACCATTTGCCAGTCTTGTGCGCTGGATGCGCAGA
CTGCTTACGGGATGGACAGCGTGCAGGTGATTGAGCAGGATGAGATGGTG
GTCAGTGAGATGAATTATGAGGAAGAAGGATCGAATGACTCCGATGTTGA
ACTGATTGAGCCAGTCGATGGCAGCCAGGAGATGGAGACAATTGACTTGA
CAATCGATTCACCGGGGGACAACGTGGAGAATATGTGCCCCAACTCAAAC
TCCAACGGGAATGGCAATGTGAGCCAGAGCAGCGCCCAGAAGGATACCAA
GAAGAAAATGCTGAAGAAGACACATAAATGTAACATTTGCGGGAAGTATT
TCATGTTACCTGCGCACCTTAAGTGTCACATGTGGGTCCATGCGCGTGAA
AAACCTTACAAATGCTTACAATGCTCCCAGTCCTACGCACAAATCCGCGG
TCTTAGGCGCCATGAGCGCGTACATAGTTCGAGACCTGAATTACGATCCT
ACAAGTGTTCCCGATGCCCCAAGATCTTCAACAGAAACTCTGCCCTTAAG
AACCACGAGACCATGCACCATAATGCAAGCTTTCTAGACCAT

BO05063.complete Blast Records

Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-27 07:00:41
Subject Length Description Subject Range Query Range Score Percent Strand
CG4318-RB 711 CG4318-PB 1..708 17..724 3540 100 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 07:00:43
Subject Length Description Subject Range Query Range Score Percent Strand
CG4318-RB 1464 CG4318-RB 65..772 17..724 3540 100 Plus
CG4318-RB 1464 CG4318-RB 778..858 644..724 375 97.5 Plus
CG4318-RB 1464 CG4318-RB 864..944 644..724 375 97.5 Plus
CG4318-RB 1464 CG4318-RB 950..1030 644..724 375 97.5 Plus
CG4318-RB 1464 CG4318-RB 1036..1116 644..724 375 97.5 Plus
CG4318-RB 1464 CG4318-RB 1122..1202 644..724 375 97.5 Plus
CG4318-RB 1464 CG4318-RB 1208..1282 644..718 345 97.3 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 07:00:39
Subject Length Description Subject Range Query Range Score Percent Strand
X 23542271 X 13154153..13154860 724..17 3540 100 Minus
X 23542271 X 13154067..13154147 724..644 375 97.5 Minus
X 23542271 X 13153723..13153803 724..644 375 97.5 Minus
X 23542271 X 13153809..13153889 724..644 375 97.5 Minus
X 23542271 X 13153895..13153975 724..644 375 97.5 Minus
X 23542271 X 13153981..13154061 724..644 375 97.5 Minus
X 23542271 X 13153643..13153717 718..644 345 97.3 Minus
Blast to na_te.dros performed on 2014-11-27 07:00:40 has no hits.

BO05063.complete Sim4 Records

Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-21 22:36:37 Download gff for BO05063.complete
Subject Subject Range Query Range Percent Splice Strand
CG4318-RA 1..699 29..728 99   Plus
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-11 07:04:42 Download gff for BO05063.complete
Subject Subject Range Query Range Percent Splice Strand
CG4318-RA 57..775 6..728 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 05:02:17 Download gff for BO05063.complete
Subject Subject Range Query Range Percent Splice Strand
CG4318-RB 65..772 17..726 99   Plus
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 22:36:37 Download gff for BO05063.complete
Subject Subject Range Query Range Percent Splice Strand
CG4318-RA 1..699 29..728 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 08:00:42 Download gff for BO05063.complete
Subject Subject Range Query Range Percent Splice Strand
CG4318-RB 65..772 17..726 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 08:00:42 Download gff for BO05063.complete
Subject Subject Range Query Range Percent Splice Strand
X 13154151..13154860 17..726 99   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 05:02:17 Download gff for BO05063.complete
Subject Subject Range Query Range Percent Splice Strand
arm_X 13048184..13048893 17..726 99   Minus

BO05063.pep Sequence

Translation from 16 to 742

> BO05063.pep
MDSRMCRVCLREMENMLCIFETMPLPGVSLATMISDWCGFPVLPKDPFPK
TICQSCALDAQTAYGMDSVQVIEQDEMVVSEMNYEEEGSNDSDVELIEPV
DGSQEMETIDLTIDSPGDNVENMCPNSNSNGNGNVSQSSAQKDTKKKMLK
KTHKCNICGKYFMLPAHLKCHMWVHAREKPYKCLQCSQSYAQIRGLRRHE
RVHSSRPELRSYKCSRCPKIFNRNSALKNHETMHHNASFLDH

BO05063.pep Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 18:41:45
Subject Length Description Subject Range Query Range Score Percent Strand
CG4318-PB 236 CG4318-PB 1..236 1..236 1287 100 Plus
CG15436-PA 346 CG15436-PA 2..232 3..234 248 30 Plus
Neu2-PB 308 CG7204-PB 1..203 16..240 247 30.4 Plus
Neu2-PA 382 CG7204-PA 1..203 16..240 247 30.4 Plus
CG6808-PB 375 CG6808-PB 162..333 72..234 199 28.6 Plus
CG15436-PA 346 CG15436-PA 220..317 135..235 173 32.7 Plus