Clone BO05064 Report

Search the DGRC for BO05064

Clone and Library Details

Library:BO
Tissue Source:D. melanogaster
Created by:Joe Carlson
Date Registered:2004-06-03
Comments:Infusion clones with open reading frames
Original Plate Number:50
Well:64
Vector:pDNR-Dual
Associated Gene/TranscriptCG4565-RB
Protein status:BO05064.pep: validated not full length
Sequenced Size:841

Associated Genes

Associations are from manual ordering of a clone or by a periodic analysis.
Gene Date Evidence
CG4565 2008-04-29 Picked prior to 5.5

Clone Sequence Records

BO05064.3prime Sequence

839 bp (838 high quality bases) assembled on 2005-12-02

> BO05064.3prime
ATGGTCTAGAAAGCTTGCTTCTTCTATTTCAGTATTTGGCATGAAACCCG
TGCATTTTGAAGCACCACAGAGGCAAGTCTTTCCACCTGTCATCTTTTTA
TACTGCCCTTCTCCGCCATAATGAAAGCATAACTCCTCCTTGGCCGCAAT
ATCCCTTGCTGCGAAAATACCTATTTTTGGTATGGGACAGTCTATTCGTA
CAGCTGCTATATGACAGTTCGGTTCGCAGCTGTGGTTCAGGTAGCGTCCG
ATGTTTCCACGTCTTGATGGATCAACGATGGTCACCTGTTGCTTCTTGTC
GCTAGTGTATTCATTAAGCACCAGGATATAGTTCATCAGGCCTAGTTTTT
CATTATCATGCAAGCGGCTTCTTGCCTCGGGAACCGTTAAAAGTTCTCCG
GCATATTCGCAAATGTATCCTCCTTTTGTAATTTTCGCTGTAGTCCGTAG
TCCTTTGGATCCGTACACGGGCGAATCGAATATTTCCAAATGTTTCCTCG
GGCCTGAGTACACAAGCCGATTGGAGCACGTGTTTCTACAGCATTTGCAC
ATGTCATTGCACTCAATGACAGGATTTGCGGAATTCCGAAGAATTAATTC
GCTGCCATCTTCTGTGAACTCATATTGGCCTCCATGTGCACAGACTTCGC
TGTTTTCGCAGGCTCCTTTGCAGTGACAGGGGTTCAAAAGAACAGAATTG
TACTCGTCCGCCAAGAATTTGAATTCTTTACTTCCATCGCTGGGCATCAA
CACAGATTCCAATATGTAATCGAGTCCATCTGGGTGCTCATAGTCGTCAT
TCGGAGCTGTTTCAGATTCGTCCATGTCGACTGATAACT

BO05064.3prime Blast Records

Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 12:16:37
Subject Length Description Subject Range Query Range Score Percent Strand
CG4565-PA 672 CG4565-RA 1..656 825..170 3280 100 Minus
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-09 18:44:22
Subject Length Description Subject Range Query Range Score Percent Strand
CG4565-RB 866 CG4565-RB 19..825 825..19 4035 100 Minus
CG6567-RB 1017 CG6567-RB 801..942 32..173 710 100 Plus
Blast to na_all.dmel.RELEASE6 performed 2015-02-09 18:44:17
Subject Length Description Subject Range Query Range Score Percent Strand
3R 32079331 3R 10852742..10853397 825..170 3280 100 Minus
3R 32079331 3R 10853449..10853603 173..19 775 100 Minus
Blast to na_te.dros performed on 2015-02-09 18:44:19 has no hits.

BO05064.3prime Sim4 Records

Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 02:16:31 Download gff for BO05064.3prime
Subject Subject Range Query Range Percent Splice Strand
CG4565-PA 1..662 164..825 99   Minus
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 00:35:48 Download gff for BO05064.3prime
Subject Subject Range Query Range Percent Splice Strand
CG4565-PA 1..662 164..825 99   Minus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-13 04:00:38 Download gff for BO05064.3prime
Subject Subject Range Query Range Percent Splice Strand
CG4565-RB 19..828 15..825 99   Minus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-09 21:14:16 Download gff for BO05064.3prime
Subject Subject Range Query Range Percent Splice Strand
CG4565-RB 19..828 15..825 99   Minus
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-09 21:14:16 Download gff for BO05064.3prime
Subject Subject Range Query Range Percent Splice Strand
3R 10852742..10853396 171..825 100 -> Minus
3R 10853452..10853606 15..170 98   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-13 04:00:38 Download gff for BO05064.3prime
Subject Subject Range Query Range Percent Splice Strand
arm_3R 6678464..6679118 171..825 100 -> Minus
arm_3R 6679174..6679328 15..170 98   Minus

BO05064.5prime Sequence

839 bp (802 high quality bases) assembled on 2005-12-02

> BO05064.5prime
GAAGTTATCAGTCGACATGGACGAATCTGAAACAGCTCCGAATGACGACT
ATGAGCACCCAGATGGACTCGATTACATATTGGAATCTGTGTTGATGCCC
AGCGATGGAAGTAAAGAATTCAAATTCTTGGCGGACGAGTACAATTCTGT
TCTTTTGAACCCCTGTCACTGCAAAGGAGCCTGCGAAAACAGCGAAGTCT
GTGCACATGGAGGCCAATATGAGTTCACAGAAGATGGCAGCGAATTAATT
CTTCGGAATTCCGCAAATCCTGTCATTGAGTGCAATGACATGTGCAAATG
CTGTAGAAACACGTGCTCCAATCGGCTTGTGTACTCAGGCCCGAGGAAAC
ATTTGGAAATATTCGATTCGCCCGTGTACGGATCCAAAGGACTACGGACT
ACAGCGAAAATTACAAAAGGAGGATACATTTGCGAATATGCCGGAGAACT
TTTAACGGTTCCCGAGGCAAGAAGCCGCTTGCATGATAATGAAAAACTAG
GCCTGATGAACTATATCCTGGTGCTTAATGAATACACTAGCGACAAGAAG
CAACAGGTGACCATCGTTGATCCATCAAGACGTGGAAACATCGGACGCTA
CCTGAACCACAGCTGCGAACCGAACTGTCATATAGCAGCTGTACGAATAG
ACTGTCCCATACCAAAAATAGGTATTTTCGCAGCAAGGGATATTGCGGCC
AAGGAGGAGTTATGCTTTCATTATGGCGGAGAAGGGCAGTATAAAAAGAT
GACAGGTGGAAAGACTTGCCTCTGTGGTGCTTCAAAATGCACGGGTTTCA
TGCCAAATACTGAAATAGAAGAAGCAAGCTTTCTAGACC

BO05064.5prime Blast Records

Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 12:16:38
Subject Length Description Subject Range Query Range Score Percent Strand
CG4565-PA 672 CG4565-RA 1..656 17..672 3280 100 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-12 10:14:06
Subject Length Description Subject Range Query Range Score Percent Strand
CG4565-RB 866 CG4565-RB 19..825 17..823 4035 100 Plus
CG6567-RB 1017 CG6567-RB 801..942 810..669 710 100 Minus
Blast to na_all.dmel.RELEASE6 performed 2015-02-12 10:14:05
Subject Length Description Subject Range Query Range Score Percent Strand
3R 32079331 3R 10852742..10853397 17..672 3280 100 Plus
3R 32079331 3R 10853449..10853603 669..823 775 100 Plus
Blast to na_te.dros performed on 2015-02-12 10:14:05 has no hits.

BO05064.5prime Sim4 Records

Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 02:16:31 Download gff for BO05064.5prime
Subject Subject Range Query Range Percent Splice Strand
CG4565-PA 1..662 17..678 99   Plus
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 00:35:49 Download gff for BO05064.5prime
Subject Subject Range Query Range Percent Splice Strand
CG4565-PA 1..662 17..678 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-29 20:54:41 Download gff for BO05064.5prime
Subject Subject Range Query Range Percent Splice Strand
CG4565-RB 19..828 17..827 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-12 12:56:02 Download gff for BO05064.5prime
Subject Subject Range Query Range Percent Splice Strand
CG4565-RB 19..828 17..827 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-12 12:56:02 Download gff for BO05064.5prime
Subject Subject Range Query Range Percent Splice Strand
3R 10852742..10853396 17..671 100 -> Plus
3R 10853452..10853606 672..827 98   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-29 20:54:41 Download gff for BO05064.5prime
Subject Subject Range Query Range Percent Splice Strand
arm_3R 6678464..6679118 17..671 100 -> Plus
arm_3R 6679174..6679328 672..827 98   Plus

BO05064.complete Sequence

841 bp (841 high quality bases) assembled on 2005-09-13

GenBank Submission: FJ629966

> BO05064.complete
GAAGTTATCAGTCGACATGGACGAATCTGAAACAGCTCCGAATGACGACT
ATGAGCACCCAGATGGACTCGATTACATATTGGAATCTGTGTTGATGCCC
AGCGATGGAAGTAAAGAATTCAAATTCTTGGCGGACGAGTACAATTCTGT
TCTTTTGAACCCCTGTCACTGCAAAGGAGCCTGCGAAAACAGCGAAGTCT
GTGCACATGGAGGCCAATATGAGTTCACAGAAGATGGCAGCGAATTAATT
CTTCGGAATTCCGCAAATCCTGTCATTGAGTGCAATGACATGTGCAAATG
CTGTAGAAACACGTGCTCCAATCGGCTTGTGTACTCAGGCCCGAGGAAAC
ATTTGGAAATATTCGATTCGCCCGTGTACGGATCCAAAGGACTACGGACT
ACAGCGAAAATTACAAAAGGAGGATACATTTGCGAATATGCCGGAGAACT
TTTAACGGTTCCCGAGGCAAGAAGCCGCTTGCATGATAATGAAAAACTAG
GCCTGATGAACTATATCCTGGTGCTTAATGAATACACTAGCGACAAGAAG
CAACAGGTGACCATCGTTGATCCATCAAGACGTGGAAACATCGGACGCTA
CCTGAACCACAGCTGCGAACCGAACTGTCATATAGCAGCTGTACGAATAG
ACTGTCCCATACCAAAAATAGGTATTTTCGCAGCAAGGGATATTGCGGCC
AAGGAGGAGTTATGCTTTCATTATGGCGGAGAAGGGCAGTATAAAAAGAT
GACAGGTGGAAAGACTTGCCTCTGTGGTGCTTCAAAATGCACGGGTTTCA
TGCCAAATACTGAAATAGAAGAAGCAAGCTTTCTAGACCAT

BO05064.complete Blast Records

Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-27 15:37:02
Subject Length Description Subject Range Query Range Score Percent Strand
CG4565-RB 810 CG4565-PB 1..807 17..823 4035 100 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 15:37:03
Subject Length Description Subject Range Query Range Score Percent Strand
CG4565-RB 866 CG4565-RB 19..825 17..823 4035 100 Plus
CG6567-RB 1017 CG6567-RB 801..942 810..669 710 100 Minus
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 15:37:00
Subject Length Description Subject Range Query Range Score Percent Strand
3R 32079331 3R 10852742..10853397 17..672 3280 100 Plus
3R 32079331 3R 10853449..10853603 669..823 775 100 Plus
Blast to na_te.dros performed on 2014-11-27 15:37:01 has no hits.

BO05064.complete Sim4 Records

Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-21 22:36:38 Download gff for BO05064.complete
Subject Subject Range Query Range Percent Splice Strand
CG4565-RB 1..810 17..827 99   Plus
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-11 07:04:44 Download gff for BO05064.complete
Subject Subject Range Query Range Percent Splice Strand
CG4565-RB 19..828 17..827 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 18:43:43 Download gff for BO05064.complete
Subject Subject Range Query Range Percent Splice Strand
CG4565-RB 19..825 17..825 99   Plus
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 22:36:38 Download gff for BO05064.complete
Subject Subject Range Query Range Percent Splice Strand
CG4565-RB 19..828 17..827 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 16:12:12 Download gff for BO05064.complete
Subject Subject Range Query Range Percent Splice Strand
CG4565-RB 19..825 17..825 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 16:12:12 Download gff for BO05064.complete
Subject Subject Range Query Range Percent Splice Strand
3R 10852742..10853396 17..671 100 -> Plus
3R 10853452..10853603 672..825 98   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 18:43:43 Download gff for BO05064.complete
Subject Subject Range Query Range Percent Splice Strand
arm_3R 6678464..6679118 17..671 100 -> Plus
arm_3R 6679174..6679325 672..825 98   Plus

BO05064.pep Sequence

Translation from 16 to 841

> BO05064.pep
MDESETAPNDDYEHPDGLDYILESVLMPSDGSKEFKFLADEYNSVLLNPC
HCKGACENSEVCAHGGQYEFTEDGSELILRNSANPVIECNDMCKCCRNTC
SNRLVYSGPRKHLEIFDSPVYGSKGLRTTAKITKGGYICEYAGELLTVPE
ARSRLHDNEKLGLMNYILVLNEYTSDKKQQVTIVDPSRRGNIGRYLNHSC
EPNCHIAAVRIDCPIPKIGIFAARDIAAKEELCFHYGGEGQYKKMTGGKT
CLCGASKCTGFMPNTEIEEASFLDH

BO05064.pep Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 01:33:31
Subject Length Description Subject Range Query Range Score Percent Strand
CG4565-PB 269 CG4565-PB 1..269 1..269 1470 100 Plus
G9a-PA 1637 CG2995-PA 1398..1599 50..258 250 31.1 Plus
G9a-PB 1657 CG2995-PB 1418..1619 50..258 250 31.1 Plus
Su(var)3-9-PA 635 CG43664-PA 412..630 50..258 231 30.1 Plus
Mes-4-PB 1423 CG4976-PB 1207..1368 88..260 216 32.2 Plus