Clone BO05095 Report

Search the DGRC for BO05095

Clone and Library Details

Library:BO
Tissue Source:D. melanogaster
Created by:Joe Carlson
Date Registered:2004-06-03
Comments:Infusion clones with open reading frames
Original Plate Number:50
Well:95
Vector:pDNR-Dual
Associated Gene/Transcriptinv-RA
Protein status:BO05095.pep: Imported from assembly
Sequenced Size:1762

Clone Sequence Records

BO05095.3prime Sequence

817 bp (760 high quality bases) assembled on 2005-12-02

> BO05095.3prime
ATGGTCTAGAAAGCTTGCGCAGGGCTCCTTGGCGGCAGCGGCACTAGCCG
CCTCCTGCAGCTCCTGCAGCTCCTCCTCCTCGCGGGTCAGCGGTATCGTC
GAGTGGTTGTACAATCCCTGCGCCATCAGCTGCAGCGCCAGCGGATTCTT
GGTGCCGCTCGACTTTTTCAGCTTGGCCCGTTTGTTCTGGAACCAGATCT
TGATCTGCGCCTCGTTCAGTCCCAGTTCCCCGCTCAGCTGCTGGCGTCGC
TTCTCCGTCAGATAGCGATTCTCGTTGAACTCGTGCTTCAGTCTGGCCAA
CTGCGTTCCGCTGAAGGCCGTTCGCGGCCTTTTGTCCTCCGGCACCCCGC
CCCCATCGGCGGCCTCCCCCTTCTCGACGCCCCCACCCCCACCACCTGCC
GCCGAACTGGACGTCGCCGGCTTCTTGGGCTTTCGCGCTCGTGGACTTCG
ACCTGAGCTGGGACGATCGCTGTAGCGGGTGCAGTAGACCCACGCTGGCC
AAACGATGGGAGTGCCGGAATCCTCGCCCGATTTACCGGATGCTCCTGTG
GCACCCGCTCCTGCCGCTGGCGGTGGCGACTTGACCAGATCCACTGGTGC
CCCCGAGGTGTTCGTCGTGCTGCTGCTGGTGGCGGTGCTATTGGAATCGT
TGCTGTTGCTGCATATATTCGCCAGCGAGCTGGAGAAGCTCAAGCTCGAG
TTGGCGGCGGCGTTACTTTGAGCCAGATTCAGTGGCTTTCCCGACTTCTT
GGGCGCCTTTAGGGGAGATCTGTTGCCATTGGTATTTCCAGAATTTTTAC
TGCTGCCAGTACTGCTC

BO05095.3prime Blast Records

Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 12:17:10
Subject Length Description Subject Range Query Range Score Percent Strand
CG17835-PD 1731 inv-RD 930..1728 817..19 3995 100 Minus
CG17835-PC 1731 inv-RC 930..1728 817..19 3995 100 Minus
CG17835-PA 1731 inv-RA 930..1728 817..19 3995 100 Minus
CG17835-PB 1731 inv-RB 930..1728 817..19 3995 100 Minus
CG9015-PB 1659 en-RB 1477..1524 219..172 215 97.9 Minus
CG9015-PA 1659 en-RA 1477..1524 219..172 215 97.9 Minus
CG9015-PB 1659 en-RB 1273..1313 492..452 180 97.5 Minus
CG9015-PA 1659 en-RA 1273..1313 492..452 180 97.5 Minus
CG9015-PB 1659 en-RB 1549..1593 147..103 175 95.5 Minus
CG9015-PA 1659 en-RA 1549..1593 147..103 175 95.5 Minus
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-09 18:44:42
Subject Length Description Subject Range Query Range Score Percent Strand
inv-RE 4776 CG17835-RE 1198..1996 817..19 3995 100 Minus
inv-RB 2261 CG17835-RB 1198..1996 817..19 3995 100 Minus
inv-RD 3404 CG17835-RD 2341..3139 817..19 3995 100 Minus
Blast to na_all.dmel.RELEASE6 performed 2015-02-09 18:44:34
Subject Length Description Subject Range Query Range Score Percent Strand
2R 25286936 2R 11476905..11477271 817..451 1835 100 Minus
2R 25286936 2R 11506647..11506915 287..19 1345 100 Minus
2R 25286936 2R 11506069..11506229 446..286 805 100 Minus
2R 25286936 2R 11524630..11524844 68..282 670 87.4 Plus
2R 25286936 2R 11526357..11526407 451..501 210 94.1 Plus
Blast to na_te.dros performed 2015-02-09 18:44:38
Subject Length Description Subject Range Query Range Score Percent Strand
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 6814..6955 662..525 159 59.9 Minus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 6760..6883 662..537 147 61.7 Minus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 6781..6900 662..541 146 59 Minus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 6694..6847 689..537 145 59.2 Minus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 6655..6867 747..534 138 56 Minus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 2784..3013 817..593 136 55.8 Minus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 2376..2430 661..607 131 70.9 Minus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 2786..2902 662..541 129 62.1 Minus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 2382..2483 661..561 129 63.8 Minus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 2327..2382 662..607 127 69.6 Minus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 2312..2438 662..528 124 59.3 Minus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 1524..1578 661..607 122 69.1 Minus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 6881..6935 661..607 122 69.1 Minus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 2601..2655 661..607 113 67.3 Minus
roo 9092 roo DM_ROO 9092bp 1092..1151 666..607 111 65 Minus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 2360..2415 662..607 109 66.1 Minus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 2757..2854 718..618 109 60.4 Minus

BO05095.3prime Sim4 Records

Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 02:17:12 Download gff for BO05095.3prime
Subject Subject Range Query Range Percent Splice Strand
CG17835-PA 930..1731 18..817 99   Minus
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 00:36:49 Download gff for BO05095.3prime
Subject Subject Range Query Range Percent Splice Strand
CG17835-PB 930..1731 18..817 99   Minus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-13 04:00:41 Download gff for BO05095.3prime
Subject Subject Range Query Range Percent Splice Strand
inv-RD 2341..3139 19..817 100   Minus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-09 21:14:19 Download gff for BO05095.3prime
Subject Subject Range Query Range Percent Splice Strand
inv-RD 2341..3139 19..817 100   Minus
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-09 21:14:19 Download gff for BO05095.3prime
Subject Subject Range Query Range Percent Splice Strand
2R 11476905..11477273 447..817 99 -> Minus
2R 11506069..11506229 286..446 100 -> Minus
2R 11506649..11506915 19..285 100   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-13 04:00:41 Download gff for BO05095.3prime
Subject Subject Range Query Range Percent Splice Strand
arm_2R 7364410..7364778 447..817 99 -> Minus
arm_2R 7393574..7393734 286..446 100 -> Minus
arm_2R 7394154..7394420 19..285 100   Minus

BO05095.5prime Sequence

813 bp (731 high quality bases) assembled on 2005-12-02

> BO05095.5prime
GAAGTTATCAGTCGACATGTCCACCTTGGCCAGCACTCGACCGCCCCCGC
TCAAGCTGACTATTCCTTCCTTAGAGGAGGCAGAGGACCACGCGCAGGAG
AGGAGAGCGGGCGGAGGTGGCCAGGAAGTAGGTAAAATGCATCCGGATTG
CTTGCCCTTGCCGCTTGTCCAGCCGGGCAACTCGCCCCAAGTGCGGGAGG
AGGAGGAGGACGAGCAGACGGAGTGCGAGGAGCAGCTGAACATAGAGGAT
GAAGAGGTCGAGGAGGAGCACGATTTGGACCTGGAGGATCCGGCCAGCTG
CTGCAGTGAGAATAGTGTCTTGAGTGTGGGCCAGGAACAATCGGAAGCAG
CACAGGCTGCGCTATCCGCTCAAGCTCAGGCCAGGCAGAGGCTTTTGATC
AGCCAAATCTATCGACCGTCGGCATTCAGCAGCACTGCTACCACTGTTTT
GCCGCCCAGCGAAGGTCCGCCCTTCTCACCCGAAGATCTCCTGCAACTGC
CTCCCTCCACTGGAACCTTCCAGGAGGAGTTCCTGCGAAAGTCCCAGCTG
TACGCCGAGGAGCTGATGAAACAGCAGATGCATCTAATGGCCGCCGCCAG
GGTGAACGCTCTCACGGCAGCGGCGGCGGGAAAACAGCTGCAAATGGCAA
TGGCGGCGGCGGCGGTTGCCACAGTGCCCAGCGGTCAGGATGCACTGGCT
CAGCTGACGGCCACGGCATTGGGTCTGGGACCCGGTGGAGCGGTGCATCC
CCATCAGCAATTGCTACTGCAAAGGGATCAGGTCCACCACCATCATCACA
TGCAGAATCACCT

BO05095.5prime Blast Records

Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 12:17:11
Subject Length Description Subject Range Query Range Score Percent Strand
CG17835-PD 1731 inv-RD 1..797 17..813 3985 100 Plus
CG17835-PC 1731 inv-RC 1..797 17..813 3985 100 Plus
CG17835-PA 1731 inv-RA 1..797 17..813 3985 100 Plus
CG17835-PB 1731 inv-RB 1..797 17..813 3985 100 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-11 04:50:54
Subject Length Description Subject Range Query Range Score Percent Strand
inv-RE 4776 CG17835-RE 269..1065 17..813 3985 100 Plus
inv-RB 2261 CG17835-RB 269..1065 17..813 3985 100 Plus
inv-RD 3404 CG17835-RD 1412..2208 17..813 3985 100 Plus
Blast to na_all.dmel.RELEASE6 performed 2015-02-11 04:50:51
Subject Length Description Subject Range Query Range Score Percent Strand
2R 25286936 2R 11475976..11476772 17..813 3985 100 Plus
Blast to na_te.dros performed on 2015-02-11 04:50:52 has no hits.

BO05095.5prime Sim4 Records

Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 02:17:13 Download gff for BO05095.5prime
Subject Subject Range Query Range Percent Splice Strand
CG17835-PC 1..797 17..813 100   Plus
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 00:36:51 Download gff for BO05095.5prime
Subject Subject Range Query Range Percent Splice Strand
CG17835-PB 1..797 17..813 100   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-23 06:14:30 Download gff for BO05095.5prime
Subject Subject Range Query Range Percent Splice Strand
inv-RD 1412..2208 17..813 100   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-11 09:26:15 Download gff for BO05095.5prime
Subject Subject Range Query Range Percent Splice Strand
inv-RD 1412..2208 17..813 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-11 09:26:15 Download gff for BO05095.5prime
Subject Subject Range Query Range Percent Splice Strand
2R 11475976..11476772 17..813 100   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-23 06:14:30 Download gff for BO05095.5prime
Subject Subject Range Query Range Percent Splice Strand
arm_2R 7363481..7364277 17..813 100   Plus

BO05095.complete Sequence

1762 bp assembled on 2008-11-10

> BO05095.complete
GAAGTTATCAGTCGACATGTCCACCTTGGCCAGCACTCGACCGCCCCCGC
TCAAGCTGACTATTCCTTCCTTAGAGGAGGCAGAGGACCACGCGCAGGAG
AGGAGAGCGGGCGGAGGTGGCCAGGAAGTAGGTAAAATGCATCCGGATTG
CTTGCCCTTGCCGCTTGTCCAGCCGGGCAACTCGCCCCAAGTGCGGGAGG
AGGAGGAGGACGAGCAGACGGAGTGCGAGGAGCAGCTGAACATAGAGGAT
GAAGAGGTCGAGGAGGAGCACGATTTGGACCTGGAGGATCCGGCCAGCTG
CTGCAGTGAGAATAGTGTCTTGAGTGTGGGCCAGGAACAATCGGAAGCAG
CACAGGCTGCGCTATCCGCTCAAGCTCAGGCCAGGCAGAGGCTTTTGATC
AGCCAAATCTATCGACCGTCGGCATTCAGCAGCACTGCTACCACTGTTTT
GCCGCCCAGCGAAGGTCCGCCCTTCTCACCCGAAGATCTCCTGCAACTGC
CTCCCTCCACTGGAACCTTCCAGGAGGAGTTCCTGCGAAAGTCCCAGCTG
TACGCCGAGGAGCTGATGAAACAGCAGATGCATCTAATGGCCGCCGCCAG
GGTGAACGCTCTCACGGCAGCGGCGGCGGGAAAACAGCTGCAAATGGCAA
TGGCGGCGGCGGCGGTTGCCACAGTGCCCAGCGGTCAGGATGCACTGGCT
CAGCTGACGGCCACGGCATTGGGTCTGGGACCCGGTGGAGCGGTGCATCC
CCATCAGCAATTGCTACTGCAAAGGGATCAGGTCCACCACCATCATCACA
TGCAGAATCACCTGAATAACAATGAAAATCTGCACGAAAGGGCGCTCAAA
TTCAGCATAGACAATATCCTGAAGGCGGACTTTGGTTCCAGATTGCCCAA
GATTGGTGCTTTAAGTGGCAATATCGGTGGTGGCAGTGTAAGTGGGAGCA
GTACTGGCAGCAGTAAAAATTCTGGAAATACCAATGGCAACAGATCTCCC
CTAAAGGCGCCCAAGAAGTCGGGAAAGCCACTGAATCTGGCTCAAAGTAA
CGCCGCCGCCAACTCGAGCTTGAGCTTCTCCAGCTCGCTGGCGAATATAT
GCAGCAACAGCAACGATTCCAATAGCACCGCCACCAGCAGCAGCACGACG
AACACCTCGGGGGCACCAGTGGATCTGGTCAAGTCGCCACCGCCAGCGGC
AGGAGCGGGTGCCACAGGAGCATCCGGTAAATCGGGCGAGGATTCCGGCA
CTCCCATCGTTTGGCCAGCGTGGGTCTACTGCACCCGCTACAGCGATCGT
CCCAGCTCAGGTCGAAGTCCACGAGCGCGAAAGCCCAAGAAGCCGGCGAC
GTCCAGTTCGGCGGCAGGTGGTGGGGGTGGGGGCGTCGAGAAGGGGGAGG
CCGCCGATGGGGGCGGGGTGCCGGAGGACAAAAGGCCGCGAACGGCCTTC
AGCGGAACGCAGTTGGCCAGACTGAAGCACGAGTTCAACGAGAATCGCTA
TCTGACGGAGAAGCGACGCCAGCAGCTGAGCGGGGAACTGGGACTGAACG
AGGCGCAGATCAAGATCTGGTTCCAGAACAAACGGGCCAAGCTGAAAAAG
TCGAGCGGCACCAAGAATCCGCTGGCGCTGCAGCTGATGGCGCAGGGATT
GTACAACCACTCGACGATACCGCTGACCCGCGAGGAGGAGGAGCTGCAGG
AGCTGCAGGAGGCGGCTAGTGCCGCTGCCGCCAAGGAGCCCTGCGCAAGC
TTTCTAGACCAT

BO05095.complete Blast Records

Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-27 01:40:49
Subject Length Description Subject Range Query Range Score Percent Strand
inv-RE 1731 CG17835-PE 1..1728 17..1744 8640 100 Plus
inv-RB 1731 CG17835-PB 1..1728 17..1744 8640 100 Plus
inv-RD 1731 CG17835-PD 1..1728 17..1744 8640 100 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 01:40:50
Subject Length Description Subject Range Query Range Score Percent Strand
inv-RE 4776 CG17835-RE 269..1996 17..1744 8640 100 Plus
inv-RB 2261 CG17835-RB 269..1996 17..1744 8640 100 Plus
inv-RD 3404 CG17835-RD 1412..3139 17..1744 8640 100 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 01:40:44
Subject Length Description Subject Range Query Range Score Percent Strand
2R 25286936 2R 11475976..11477271 17..1312 6480 100 Plus
2R 25286936 2R 11506647..11506915 1476..1744 1345 100 Plus
2R 25286936 2R 11506069..11506229 1317..1477 805 100 Plus
2R 25286936 2R 11524630..11524844 1695..1481 670 87.4 Minus
2R 25286936 2R 11526357..11526407 1312..1262 210 94.1 Minus
Blast to na_te.dros performed 2014-11-27 01:40:47
Subject Length Description Subject Range Query Range Score Percent Strand
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 6814..6955 1101..1238 159 59.9 Plus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 6760..6883 1101..1226 147 61.7 Plus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 6781..6900 1101..1222 146 59 Plus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 6694..6847 1074..1226 145 59.2 Plus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 2783..3013 945..1170 141 56 Plus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 6655..6867 1016..1229 138 56 Plus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 2376..2430 1102..1156 131 70.9 Plus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 2786..2902 1101..1222 129 62.1 Plus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 2327..2382 1101..1156 127 69.6 Plus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 2312..2438 1101..1235 124 59.3 Plus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 1524..1578 1102..1156 122 69.1 Plus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 6881..6935 1102..1156 122 69.1 Plus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 2601..2655 1102..1156 113 67.3 Plus

BO05095.complete Sim4 Records

Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-11 07:49:03 Download gff for BO05095.complete
Subject Subject Range Query Range Percent Splice Strand
inv-RA 1412..3139 17..1744 100   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 04:59:32 Download gff for BO05095.complete
Subject Subject Range Query Range Percent Splice Strand
inv-RD 1412..3139 17..1746 99   Plus
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-09-04 11:01:50 Download gff for BO05095.complete
Subject Subject Range Query Range Percent Splice Strand
inv-RA 1412..3139 17..1746 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 02:29:56 Download gff for BO05095.complete
Subject Subject Range Query Range Percent Splice Strand
inv-RD 1412..3139 17..1746 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 02:29:56 Download gff for BO05095.complete
Subject Subject Range Query Range Percent Splice Strand
2R 11475976..11477273 17..1316 99 -> Plus
2R 11506069..11506229 1317..1477 100 -> Plus
2R 11506649..11506915 1478..1746 99   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 04:59:32 Download gff for BO05095.complete
Subject Subject Range Query Range Percent Splice Strand
arm_2R 7363481..7364778 17..1316 99 -> Plus
arm_2R 7393574..7393734 1317..1477 100 -> Plus
arm_2R 7394154..7394420 1478..1746 99   Plus

BO05095.pep Sequence

Translation from 16 to 1762

> BO05095.pep
MSTLASTRPPPLKLTIPSLEEAEDHAQERRAGGGGQEVGKMHPDCLPLPL
VQPGNSPQVREEEEDEQTECEEQLNIEDEEVEEEHDLDLEDPASCCSENS
VLSVGQEQSEAAQAALSAQAQARQRLLISQIYRPSAFSSTATTVLPPSEG
PPFSPEDLLQLPPSTGTFQEEFLRKSQLYAEELMKQQMHLMAAARVNALT
AAAAGKQLQMAMAAAAVATVPSGQDALAQLTATALGLGPGGAVHPHQQLL
LQRDQVHHHHHMQNHLNNNENLHERALKFSIDNILKADFGSRLPKIGALS
GNIGGGSVSGSSTGSSKNSGNTNGNRSPLKAPKKSGKPLNLAQSNAAANS
SLSFSSSLANICSNSNDSNSTATSSSTTNTSGAPVDLVKSPPPAAGAGAT
GASGKSGEDSGTPIVWPAWVYCTRYSDRPSSGRSPRARKPKKPATSSSAA
GGGGGGVEKGEAADGGGVPEDKRPRTAFSGTQLARLKHEFNENRYLTEKR
RQQLSGELGLNEAQIKIWFQNKRAKLKKSSGTKNPLALQLMAQGLYNHST
IPLTREEEELQELQEAASAAAAKEPCASFLDH

BO05095.pep Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 05:27:55
Subject Length Description Subject Range Query Range Score Percent Strand
inv-PE 576 CG17835-PE 1..576 1..576 2948 100 Plus
inv-PB 576 CG17835-PB 1..576 1..576 2948 100 Plus
inv-PD 576 CG17835-PD 1..576 1..576 2948 100 Plus
en-PA 552 CG9015-PA 291..544 294..561 576 45.8 Plus
en-PB 552 CG9015-PB 291..544 294..561 576 45.8 Plus