Clone Sequence Records
BO05118.5prime Sequence
315 bp (284 high quality bases) assembled on 2005-12-02
> BO05118.5prime
GAAGTTATCAGTCGACATGGCAGGTCCTTTTATATCACCGCTGCCCGGCG
ATCTGCTCACGGAGTATATGTTTGGCCGTAGGCGACAGCGCCGGAACCGG
ACGACCTTCACGCCACAGCAGCTGCAGGAGCTGGAGGCACTCTTCCAGAA
GACCCACTATCCCGACGTCTTCCTGCGCGAGGAGGTGGCCCTGAGGATCA
GCCTCAGCGAGGCACGCGTCCAGGTGTGGTTCCAGAATCGCCGGGCCAAG
TGGCGCAAGCAGGCACGACTGCAGCTCCTCCAGGACGCCTGGCGGATGCG
CTGCCTCCGCCTGGG
BO05118.5prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 12:17:34
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG11294-PA | 786 | CG11294-RA | 1..299 | 17..315 | 1470 | 99.6 | Plus |
| CG10052-PA | 2622 | Rx-RA | 1711..1751 | 215..255 | 180 | 97.5 | Plus |
| CG2819-PA | 1074 | Pph13-RA | 163..205 | 221..263 | 165 | 95.3 | Plus |
| CG4136-PA | 2514 | CG4136-RA | 1318..1355 | 221..258 | 165 | 97.3 | Plus |
| CG31240-PA | 1839 | repo-RA | 1045..1085 | 221..261 | 155 | 95.1 | Plus |
| CG1447-PB | 957 | Ptx1-RB | 354..390 | 223..259 | 135 | 94.5 | Plus |
| CG1447-PA | 1530 | Ptx1-RA | 927..963 | 223..259 | 135 | 94.5 | Plus |
| CG1447-PC | 1545 | Ptx1-RC | 942..978 | 223..259 | 135 | 94.5 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-12 01:16:38
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG11294-RB | 1291 | CG11294-RB | 158..456 | 17..315 | 1480 | 99.7 | Plus |
| CG11294-RA | 1068 | CG11294-RA | 158..456 | 17..315 | 1480 | 99.7 | Plus |
| Rx-RB | 3267 | CG10052-RB | 1969..2139 | 85..255 | 290 | 79.3 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2015-02-12 01:16:33
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| X | 23542271 | X | 8693254..8693463 | 226..17 | 1050 | 100 | Minus |
| X | 23542271 | X | 8692655..8692749 | 315..221 | 460 | 98.9 | Minus |
| 2L | 23513712 | 2L | 578169..578318 | 114..263 | 255 | 78 | Plus |
| 3R | 32079331 | 3R | 18237911..18237996 | 176..261 | 190 | 81.4 | Plus |
Blast to na_te.dros performed on 2015-02-12 01:16:35 has no hits.
BO05118.5prime Sim4 Records
Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 02:17:44 Download gff for
BO05118.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG11294-PA | 1..299 | 17..315 | 99 | | Plus |
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 00:37:37 Download gff for
BO05118.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG11294-PA | 1..299 | 17..315 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-28 11:40:24 Download gff for
BO05118.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG11294-RA | 87..390 | 9..315 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-12 05:23:02 Download gff for
BO05118.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG11294-RA | 153..456 | 9..315 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-12 05:23:02 Download gff for
BO05118.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| X | 8692655..8692746 | 224..315 | 98 | <- | Minus |
| X | 8693257..8693468 | 9..223 | 98 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-28 11:40:24 Download gff for
BO05118.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_X | 8586688..8586779 | 224..315 | 98 | <- | Minus |
| arm_X | 8587290..8587501 | 9..223 | 98 | | Minus |
BO05118.3prime Sequence
338 bp (252 high quality bases) assembled on 2005-12-02
> BO05118.3prime
ATGGTCTAGAAAGCTTGCCAGGCCTCCATTCGCCTCCGCTGATCCCGCCG
CCCCCTGAGTTCCCTGTTGTTGTTGCTGCTGCTGCTGCTGCTGGAGCTTG
CTGCTCTGGGAGAAATCGATACAGGCGCCGGAGGTGAGATCAATCTCCTC
GGAATCGGATCCATCGGAACCCTCGTCGGAGTGTCCGGATAGGGCGGCCA
TTCCGCCCAGTTCCATGCCGTGCGACGGCGCCTTATAGAGCTTTTAGTTC
TGTATAGGTCTTCGATAGCTTATCCTGATCCGTGGCCTGCTGGTGTCCCT
GGTGCTGTTGTTGCTGATGCTGCTGCTGGAATGGCCGG
BO05118.3prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 12:17:33
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG11294-PA | 786 | CG11294-RA | 558..783 | 244..19 | 1130 | 100 | Minus |
| CG11294-PA | 786 | CG11294-RA | 470..560 | 333..243 | 455 | 100 | Minus |
| CG32848-PA | 1737 | VAChT-RA | 1643..1673 | 95..65 | 155 | 100 | Minus |
| CG32560-PA | 4671 | CG32560-RA | 3546..3576 | 94..64 | 155 | 100 | Minus |
| CG13830-PA | 1983 | CG13830-RA | 900..929 | 94..65 | 150 | 100 | Minus |
| CG1775-PB | 2094 | Med-RB | 856..885 | 93..64 | 150 | 100 | Minus |
| CG32532-PA | 2211 | CG32532-RA | 331..360 | 93..64 | 150 | 100 | Minus |
| CG32062-PB | 2550 | CG32062-RB | 121..150 | 93..64 | 150 | 100 | Minus |
| CG32062-PD | 2646 | CG32062-RD | 121..150 | 93..64 | 150 | 100 | Minus |
| CG32778-PA | 2829 | CG32778-RA | 1528..1557 | 93..64 | 150 | 100 | Minus |
| CG10732-PA | 4974 | CG10732-RA | 4057..4086 | 93..64 | 150 | 100 | Minus |
| CG32133-PA | 6885 | CG32133-RA | 676..704 | 93..65 | 145 | 100 | Minus |
| CG32494-PA | 1074 | CG32494-RA | 588..616 | 93..65 | 145 | 100 | Minus |
| CG33261-PI | 1704 | Trl-RI | 1285..1313 | 93..65 | 145 | 100 | Minus |
| CG33261-PA | 1749 | Trl-RA | 1285..1313 | 93..65 | 145 | 100 | Minus |
| CG33261-PF | 1749 | Trl-RF | 1285..1313 | 93..65 | 145 | 100 | Minus |
| CG32365-PA | 1887 | CG32365-RA | 604..632 | 93..65 | 145 | 100 | Minus |
| CG15322-PA | 2217 | CG15322-RA | 1080..1108 | 94..66 | 145 | 100 | Minus |
| CG10555-PA | 2781 | CG10555-RA | 913..941 | 93..65 | 145 | 100 | Minus |
| CG14650-PA | 2913 | CG14650-RA | 2704..2732 | 93..65 | 145 | 100 | Minus |
| CG3327-PC | 3054 | E23-RC | 281..309 | 93..65 | 145 | 100 | Minus |
| CG12690-PA | 3807 | CHES-1-like-RA | 868..896 | 93..65 | 145 | 100 | Minus |
| CG17689-PA | 5622 | CG17689-RA | 2797..2825 | 93..65 | 145 | 100 | Minus |
| CG15470-PA | 1038 | CG15470-RA | 769..796 | 93..66 | 140 | 100 | Minus |
| CG7368-PB | 1593 | CG7368-RB | 1443..1470 | 91..64 | 140 | 100 | Minus |
| CG30483-PA | 5532 | Prosap-RA | 5077..5104 | 93..66 | 140 | 100 | Minus |
| CG32133-PA | 6885 | CG32133-RA | 2647..2673 | 90..64 | 135 | 100 | Minus |
| CG32466-PB | 2079 | rn-RB | 1456..1482 | 90..64 | 135 | 100 | Minus |
| CG32466-PB | 2079 | rn-RB | 1579..1605 | 90..64 | 135 | 100 | Minus |
| CG34144-PA | 510 | CG34144-RA | 222..248 | 91..65 | 135 | 100 | Minus |
| CG5466-PA | 1785 | CG5466-RA | 922..948 | 90..64 | 135 | 100 | Minus |
| CG12772-PA | 2484 | CG12772-RA | 99..125 | 91..65 | 135 | 100 | Minus |
| CG5166-PA | 2667 | Atx2-RA | 1486..1512 | 90..64 | 135 | 100 | Minus |
| CG32466-PA | 2841 | rn-RA | 2218..2244 | 90..64 | 135 | 100 | Minus |
| CG5166-PC | 3072 | Atx2-RC | 1486..1512 | 90..64 | 135 | 100 | Minus |
| CG30089-PA | 3792 | CG30089-RA | 1908..1934 | 90..64 | 135 | 100 | Minus |
| CG16902-PC | 4557 | Hr4-RC | 1675..1701 | 90..64 | 135 | 100 | Minus |
| CG3696-PB | 6456 | kis-RB | 3550..3576 | 90..64 | 135 | 100 | Minus |
| CG14023-PA | 6804 | CG14023-RA | 2623..2649 | 90..64 | 135 | 100 | Minus |
| CG3696-PA | 15969 | kis-RA | 13063..13089 | 90..64 | 135 | 100 | Minus |
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-04 19:36:06
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG11294-RB | 1291 | CG11294-RB | 627..940 | 333..19 | 1550 | 99.7 | Minus |
| CG11294-RA | 1068 | CG11294-RA | 627..940 | 333..19 | 1550 | 99.7 | Minus |
Blast to na_all.dmel.RELEASE6 performed 2015-02-04 19:35:34
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| X | 23542271 | X | 8692171..8692484 | 19..333 | 1525 | 99.7 | Plus |
Blast to na_te.dros performed 2015-02-04 19:35:37
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 6776..6836 | 328..268 | 170 | 75.4 | Minus |
| Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 2604..2868 | 328..59 | 156 | 54.4 | Minus |
| Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 6809..6850 | 328..287 | 156 | 85.7 | Minus |
| Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 2325..2412 | 328..240 | 154 | 65.2 | Minus |
| Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 6734..6774 | 328..288 | 151 | 85.4 | Minus |
| Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 6755..6795 | 328..288 | 151 | 85.4 | Minus |
| Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 2349..2390 | 328..287 | 147 | 83.3 | Minus |
| Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 2322..2381 | 328..266 | 145 | 74.6 | Minus |
| Dvir\Het-A | 6610 | Dvir\Het-A HETAVIR 6610bp | 3294..3382 | 328..242 | 142 | 66.7 | Minus |
| Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 6905..6952 | 322..275 | 141 | 77.1 | Minus |
| roo | 9092 | roo DM_ROO 9092bp | 1058..1101 | 331..288 | 139 | 79.5 | Minus |
| Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 2376..2417 | 328..287 | 138 | 81 | Minus |
| Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 2614..2665 | 114..65 | 138 | 76.9 | Minus |
| Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 6824..6886 | 328..266 | 135 | 68.3 | Minus |
| Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 6866..6910 | 331..287 | 135 | 77.8 | Minus |
| Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 2346..2386 | 328..288 | 133 | 80.5 | Minus |
| Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 2355..2395 | 328..288 | 133 | 80.5 | Minus |
| Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 2364..2404 | 328..288 | 133 | 80.5 | Minus |
| Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 2388..2428 | 328..288 | 133 | 80.5 | Minus |
| roo | 9092 | roo DM_ROO 9092bp | 1082..1122 | 328..288 | 133 | 80.5 | Minus |
| Dyak\TART | 8444 | Dyak\TART TARTYAK 8444bp | 7955..8023 | 328..263 | 131 | 68.1 | Minus |
| TART-C | 11124 | TART-C TARTC 11124bp | 9399..9467 | 328..263 | 131 | 68.1 | Minus |
| Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 2454..2528 | 328..252 | 128 | 64.9 | Minus |
| gypsy11 | 4428 | gypsy11 GYPSY11 4428bp | 984..1025 | 328..288 | 126 | 81 | Minus |
| roo | 9092 | roo DM_ROO 9092bp | 1106..1146 | 328..288 | 124 | 78 | Minus |
| Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 6797..6838 | 328..287 | 120 | 76.2 | Minus |
| Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 1530..1598 | 328..257 | 119 | 65.3 | Minus |
| Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 1556..1586 | 329..299 | 119 | 87.1 | Minus |
| Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 6704..6753 | 338..288 | 117 | 72.5 | Minus |
| Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 2379..2419 | 328..288 | 115 | 75.6 | Minus |
| Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 1551..1580 | 328..299 | 114 | 86.7 | Minus |
| Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 2306..2372 | 326..260 | 110 | 62.7 | Minus |
| Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 2499..2538 | 328..282 | 110 | 80.9 | Minus |
| Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 2628..2656 | 328..300 | 109 | 86.2 | Minus |
| Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 1518..1605 | 316..233 | 106 | 61.4 | Minus |
| Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 2928..3031 | 328..221 | 106 | 59.3 | Minus |
| Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 6845..6885 | 328..288 | 106 | 73.2 | Minus |
| Dyak\TART | 8444 | Dyak\TART TARTYAK 8444bp | 5647..5676 | 317..288 | 105 | 83.3 | Minus |
| TART-C | 11124 | TART-C TARTC 11124bp | 7102..7131 | 317..288 | 105 | 83.3 | Minus |
| Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 2805..2846 | 328..287 | 102 | 71.4 | Minus |
| Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 6848..6889 | 328..287 | 102 | 71.4 | Minus |
| TART-A | 13424 | TART-A 13424bp | 118..159 | 329..288 | 102 | 71.4 | Minus |
| TART-A | 13424 | TART-A 13424bp | 11296..11337 | 329..288 | 102 | 71.4 | Minus |
BO05118.3prime Sim4 Records
Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 02:17:43 Download gff for
BO05118.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG11294-PA | 466..786 | 18..338 | 98 | | Minus |
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 00:37:35 Download gff for
BO05118.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG11294-PA | 466..786 | 18..338 | 98 | | Minus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-10 21:18:52 Download gff for
BO05118.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG11294-RA | 557..874 | 19..338 | 99 | | Minus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-04 21:38:27 Download gff for
BO05118.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG11294-RA | 623..940 | 19..338 | 99 | | Minus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-04 21:38:27 Download gff for
BO05118.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| X | 8692171..8692488 | 19..338 | 99 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-10 21:18:52 Download gff for
BO05118.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_X | 8586204..8586521 | 19..338 | 99 | | Plus |
BO05118.complete Sequence
817 bp assembled on 2010-07-02
GenBank Submission: KX795312
> BO05118.complete
GAAGTTATCAGTCGACATGGCAGGTCCTTTTATATCACCGCTGCCCGGCG
ATCTGCTCACGGAGTATATGTTTGGCCGTAGGCGACAGCGCCGGAACCGG
ACGACCTTCACGCCACAGCAGCTGCAGGAGCTGGAGGCACTCTTCCAGAA
GACCCACTATCCCGACGTCTTCCTGCGCGAGGAGGTGGCCCTGAGGATCA
GCCTCAGCGAGGCACGCGTCCAGGTGTGGTTCCAGAATCGCCGGGCCAAG
TGGCGCAAGCAGGCACGACTGCAGCTCCTCCAGGACGCCTGGCGGATGCG
CTGCCTCAGCCTGGGCACGCCCCCCGTCATGGGCGGTGGAGCGGTGCAGG
GCGGATCCGGCAACGGAGCTACGGCTCGACCGCCCAGCCAGACGCCGGAG
AACCTCTCTTCCGCGAGCAAGGATTCGGAACTGGCGGAGGTGGGCAATGG
ACCCAATTCGGGGAGCTTCACCATGATGCACCCGGCATTCCAGCAGCAGC
ATCAGCAACAACAGCACCAGGGACACCAGCAGGCCACGGATCAGGATAAG
CTATCGAAGACCTATACAGAACTAAAGCTCTATAAGGCGCCGTCGCACGG
CATGGAACTGGGCGGAATGGCCGCCCTATCCGGACACTCCGACGAGGGTT
CCGATGGATCCGATTCCGAGGAGATTGATCTCACCTCCGGCGCCTGTATC
GATTTCTCCCAGAGCAGCAAGCTCCAGCAGCAGCAGCAGCAGCAACAACA
ACAGGGAACTCAGGGGGCGGCGGGATCAGCGGAGGCGAATGGAGGCCTGG
CAAGCTTTCTAGACCAT
BO05118.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 02:22:59
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG11294-RB | 786 | CG11294-PB | 1..783 | 17..799 | 3915 | 100 | Plus |
| CG11294-RA | 786 | CG11294-PA | 1..783 | 17..799 | 3915 | 100 | Plus |
| Rx-RB | 2714 | CG10052-PB | 1673..1843 | 85..255 | 285 | 77.8 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 02:23:00
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG11294-RB | 1291 | CG11294-RB | 158..940 | 17..799 | 3915 | 100 | Plus |
| CG11294-RA | 1068 | CG11294-RA | 158..940 | 17..799 | 3915 | 100 | Plus |
| Rx-RB | 3267 | CG10052-RB | 1969..2139 | 85..255 | 285 | 77.8 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 02:22:54
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| X | 23542271 | X | 8692171..8692749 | 799..221 | 2895 | 100 | Minus |
| X | 23542271 | X | 8693254..8693463 | 226..17 | 1050 | 100 | Minus |
| 2L | 23513712 | 2L | 578169..578318 | 114..263 | 255 | 78 | Plus |
| 3R | 32079331 | 3R | 18237911..18237996 | 176..261 | 190 | 81.4 | Plus |
Blast to na_te.dros performed 2014-11-28 02:22:57
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 6763..6836 | 478..551 | 172 | 70.3 | Plus |
| Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 6809..6850 | 491..532 | 156 | 85.7 | Plus |
| Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 6742..6795 | 478..531 | 153 | 75.9 | Plus |
| Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 2325..2412 | 491..578 | 151 | 66.3 | Plus |
| Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 6734..6774 | 491..531 | 151 | 85.4 | Plus |
| Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 2349..2390 | 491..532 | 147 | 83.3 | Plus |
| Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 2322..2381 | 491..553 | 145 | 74.6 | Plus |
| Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 2604..2868 | 491..759 | 144 | 54.9 | Plus |
| Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 6875..6952 | 469..544 | 142 | 68.4 | Plus |
| Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 6798..6886 | 464..553 | 141 | 63.3 | Plus |
| Dvir\Het-A | 6610 | Dvir\Het-A HETAVIR 6610bp | 3294..3389 | 491..584 | 141 | 64.9 | Plus |
| roo | 9092 | roo DM_ROO 9092bp | 1058..1101 | 488..531 | 139 | 79.5 | Plus |
| Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 2376..2417 | 491..532 | 138 | 81 | Plus |
| Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 6866..6910 | 488..532 | 135 | 77.8 | Plus |
| roo | 9092 | roo DM_ROO 9092bp | 1040..1122 | 453..531 | 134 | 67.5 | Plus |
| Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 2346..2386 | 491..531 | 133 | 80.5 | Plus |
| Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 2355..2395 | 491..531 | 133 | 80.5 | Plus |
| Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 2364..2404 | 491..531 | 133 | 80.5 | Plus |
| Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 2388..2428 | 491..531 | 133 | 80.5 | Plus |
| Dyak\TART | 8444 | Dyak\TART TARTYAK 8444bp | 7955..8023 | 491..556 | 131 | 68.1 | Plus |
| TART-C | 11124 | TART-C TARTC 11124bp | 9399..9467 | 491..556 | 131 | 68.1 | Plus |
| Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 2454..2528 | 491..567 | 128 | 64.9 | Plus |
| gypsy11 | 4428 | gypsy11 GYPSY11 4428bp | 984..1025 | 491..531 | 126 | 81 | Plus |
| roo | 9092 | roo DM_ROO 9092bp | 1106..1146 | 491..531 | 124 | 78 | Plus |
| Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 6784..6838 | 478..532 | 122 | 69.1 | Plus |
| Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 1508..1598 | 469..562 | 121 | 60.6 | Plus |
| Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 1509..1580 | 451..520 | 121 | 65.3 | Plus |
| Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 1556..1586 | 490..520 | 119 | 87.1 | Plus |
| Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 2379..2419 | 491..531 | 115 | 75.6 | Plus |
| Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 6824..6885 | 469..531 | 114 | 66.7 | Plus |
| TART-A | 13424 | TART-A 13424bp | 91..159 | 463..531 | 111 | 62.3 | Plus |
| TART-A | 13424 | TART-A 13424bp | 11269..11337 | 463..531 | 111 | 62.3 | Plus |
| Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 2306..2372 | 493..559 | 110 | 62.7 | Plus |
| Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 2628..2656 | 491..519 | 109 | 86.2 | Plus |
BO05118.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-07-02 13:25:09 Download gff for
BO05118.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG11294-RA | 161..943 | 17..801 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 21:18:00 Download gff for
BO05118.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG11294-RA | 92..874 | 17..801 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 03:28:01 Download gff for
BO05118.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG11294-RA | 158..940 | 17..801 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 03:28:01 Download gff for
BO05118.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| X | 8692169..8692746 | 224..801 | 99 | <- | Minus |
| X | 8693257..8693463 | 17..223 | 100 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 21:18:00 Download gff for
BO05118.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_X | 8586202..8586779 | 224..801 | 99 | <- | Minus |
| arm_X | 8587290..8587496 | 17..223 | 100 | | Minus |
BO05118.pep Sequence
Translation from 16 to 817
> BO05118.pep
MAGPFISPLPGDLLTEYMFGRRRQRRNRTTFTPQQLQELEALFQKTHYPD
VFLREEVALRISLSEARVQVWFQNRRAKWRKQARLQLLQDAWRMRCLSLG
TPPVMGGGAVQGGSGNGATARPPSQTPENLSSASKDSELAEVGNGPNSGS
FTMMHPAFQQQHQQQQHQGHQQATDQDKLSKTYTELKLYKAPSHGMELGG
MAALSGHSDEGSDGSDSEEIDLTSGACIDFSQSSKLQQQQQQQQQQGTQG
AAGSAEANGGLASFLDH
BO05118.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 02:35:29
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG11294-PB | 261 | CG11294-PB | 1..261 | 1..261 | 1359 | 100 | Plus |
| CG11294-PA | 261 | CG11294-PA | 1..261 | 1..261 | 1359 | 100 | Plus |
| Pph13-PA | 357 | CG2819-PA | 7..278 | 21..247 | 288 | 34.9 | Plus |
| oc-PD | 542 | CG12154-PD | 42..282 | 3..263 | 270 | 32.8 | Plus |
| oc-PG | 542 | CG12154-PG | 42..282 | 3..263 | 270 | 32.8 | Plus |
