Clone BO05156 Report

Search the DGRC for BO05156

Clone and Library Details

Library:BO
Tissue Source:D. melanogaster
Created by:Joe Carlson
Date Registered:2004-06-03
Comments:Infusion clones with open reading frames
Original Plate Number:51
Well:56
Vector:pDNR-Dual
Associated Gene/Transcriptdebcl-RA
Protein status:BO05156.pep: validated full length
Sequenced Size:934

Clone Sequence Records

BO05156.3prime Sequence

907 bp (839 high quality bases) assembled on 2005-12-02

> BO05156.3prime
ATGGTCTAGAAAGCTTGCGAACAGCAGCGAATACAGTTGACCTCCAATGC
GCCGACACACGTTTGAGACCATATATGCGCCTGCAGAGATAGTCACGAAC
AGCGTCAACCATCCCAAGAACGTAAATTCGCCGACCCGGGGTCGGATGTG
CCGCGACAGGCCCAACCATCCGCCGTTGTCGATCAGCCAGTAGACCAGGT
CGTCCTCTATGATCTCAGCCAGACCGTCAATCAGGCACTGTAGGTAGTCG
AAATGTCCCTGGCGCACGCAGTCTATGGCAAAGCCGCCGCATACGGCAAA
TATCGAGATTATCTTGCCCCAGGTGATGCTGGAGCGAAAAAGATCCTTGG
CAACTAGGTTGAGCAACATGGGCGCCATGTCGCTGTCCTCCAGCTCGCCA
AACGGGGCCCTCGACAGCTGTCGCGATATGTTTGTGTACACCCGCGGGTG
CATCCGCTCCAGTTCCTCGCCCATGCTGTTCAGTGCCGGGAAAACTTCAT
AGACCACGTGCGAGGAGCCGGGGTCCAGGATGTTGCGCAAACGCTGTGTC
ACCTTCCGGTTGAGGACTCCTGCCCGTCGCAGCCGCGCTCTGATGTACTG
ACCACACAGACATTTCCCCTGGTTGATGATATCCATTTTGTACTCCTGGT
AGTTAGTCATCGTGCGCGTACTGCTAGCCAGCGAGGATGTGGAGGCGGCC
CGTGTCATGGGTCCGCCGGCGTGAAGGGAGCGTCCGTTAGAGGGATTGGG
TACGCTACCGGGTCCTCCTGCTCCTCCACCGACGCCTCCGCGGAGCGCCT
TTCAGTCGCTGGAGGCCGTTGCAATGGTGCCGCGGCGATTGGCCGTGTAG
ATCTCGTGGTCCAGCGACGAGGACTTGAACTGGGCCAGCTTGGGTGGCGG
ACTGGGT

BO05156.3prime Blast Records

Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 12:18:21
Subject Length Description Subject Range Query Range Score Percent Strand
CG33134-PA 903 debcl-RA 14..900 905..19 4360 99.6 Minus
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-13 05:45:22
Subject Length Description Subject Range Query Range Score Percent Strand
Debcl-RA 1724 CG33134-RA 639..1525 905..19 4390 99.7 Minus
Blast to na_all.dmel.RELEASE6 performed 2015-02-13 05:45:20
Subject Length Description Subject Range Query Range Score Percent Strand
2R 25286936 2R 6652188..6652643 474..19 2280 100 Minus
2R 25286936 2R 6649292..6649579 905..618 1395 99 Minus
2R 25286936 2R 6651985..6652132 622..475 740 100 Minus
Blast to na_te.dros performed on 2015-02-13 05:45:21 has no hits.

BO05156.3prime Sim4 Records

Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 02:18:36 Download gff for BO05156.3prime
Subject Subject Range Query Range Percent Splice Strand
debcl-PA 13..903 18..907 99   Minus
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 00:38:49 Download gff for BO05156.3prime
Subject Subject Range Query Range Percent Splice Strand
CG33134-PA 13..903 18..907 99   Minus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-09-01 17:56:09 Download gff for BO05156.3prime
Subject Subject Range Query Range Percent Splice Strand
debcl-RA 638..1531 11..907 99   Minus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-13 08:03:08 Download gff for BO05156.3prime
Subject Subject Range Query Range Percent Splice Strand
Debcl-RA 638..1531 11..907 99   Minus
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-13 08:03:08 Download gff for BO05156.3prime
Subject Subject Range Query Range Percent Splice Strand
2R 6649291..6649578 619..907 98 -> Minus
2R 6651989..6652132 475..618 100 -> Minus
2R 6652188..6652649 11..474 99   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-09-01 17:56:09 Download gff for BO05156.3prime
Subject Subject Range Query Range Percent Splice Strand
arm_2R 2536796..2537083 619..907 98 -> Minus
arm_2R 2539494..2539637 475..618 100 -> Minus
arm_2R 2539693..2540154 11..474 99   Minus

BO05156.5prime Sequence

887 bp (851 high quality bases) assembled on 2005-12-02

> BO05156.5prime
GAAGTTATCAGTCGACATGGCTCCCACAACCAGTCCGCCACCCAAGCTGG
CCAAGTTCAAGTCCTCGTCGCTGGACCACGAGATCTACACGGCCAATCGC
CGCGGCACCATTGCAACGGCCTCCAGCGACTGGAAGGCGCTCCGCGGAGG
CGTCGGTGGAGGAGCAGGAGGACCCGGTAGCGTACCCAATCCCTCTAACG
GACGCTCCCTTCACGCCGGCGGACCCATGACACGGGCCGCCTCCACATCC
TCGCTGGCTAGCAGTACGCGCACGATGACTAACTACCAGGAGTACAAAAT
GGATATCATCAACCAGGGGAAATGTCTGTGTGGTCAGTACATCAGAGCGC
GGCTGCGACGGGCAGGAGTCCTCAACCGGAAGGTGACACAGCGTTTGCGC
AACATCCTGGACCCCGGCTCCTCGCACGTGGTCTATGAAGTTTTCCCGGC
ACTGAACAGCATGGGCGAGGAACTGGAGCGGATGCACCCGCGGGTGTACA
CAAACATATCGCGACAGCTGTCGAGGGCCCCGTTTGGCGAGCTGGAGGAC
AGCGACATGGCGCCCATGTTGCTCAACCTAGTTGCCAAGGATCTTTTTCG
CTCCAGCATCACCTGGGGCAAGATAATCTCGATATTTGCCGTATGCGGCG
GCTTTGCCATAGACTGCGTGCGCCAGGGACATTTCGACTACCTACAGTGC
CTGATTGACGGTCTGGCTGAGATCATAGAGGACGACCTGGTCTACTGGCT
GATCGACAACGGCGGATGGTTGGGCCTGTCGCGGCACATCCGACCCCGGG
TCGGCGAATTTACGTTCTTGGGATGGTTGACGCTGTTCGTGACTATCTCT
GCAGGCGCATATATGGTCTCAAACGTGTGTCGGCGCA

BO05156.5prime Blast Records

Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 12:18:22
Subject Length Description Subject Range Query Range Score Percent Strand
CG33134-PA 903 debcl-RA 1..871 17..887 4305 99.7 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-12 10:14:53
Subject Length Description Subject Range Query Range Score Percent Strand
Debcl-RA 1724 CG33134-RA 625..1496 16..887 4330 99.8 Plus
Blast to na_all.dmel.RELEASE6 performed 2015-02-12 10:14:51
Subject Length Description Subject Range Query Range Score Percent Strand
2R 25286936 2R 6652188..6652614 461..887 2135 100 Plus
2R 25286936 2R 6649278..6649579 16..317 1480 99.3 Plus
2R 25286936 2R 6651985..6652132 313..460 740 100 Plus
Blast to na_te.dros performed on 2015-02-12 10:14:52 has no hits.

BO05156.5prime Sim4 Records

Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 02:18:37 Download gff for BO05156.5prime
Subject Subject Range Query Range Percent Splice Strand
debcl-PA 1..870 17..886 99   Plus
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 00:38:51 Download gff for BO05156.5prime
Subject Subject Range Query Range Percent Splice Strand
CG33134-PA 1..870 17..886 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-29 20:54:55 Download gff for BO05156.5prime
Subject Subject Range Query Range Percent Splice Strand
debcl-RA 620..1495 12..886 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-12 12:57:50 Download gff for BO05156.5prime
Subject Subject Range Query Range Percent Splice Strand
Debcl-RA 620..1495 12..886 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-12 12:57:50 Download gff for BO05156.5prime
Subject Subject Range Query Range Percent Splice Strand
2R 6649273..6649578 12..316 99 -> Plus
2R 6651989..6652132 317..460 100 -> Plus
2R 6652188..6652613 461..886 100   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-29 20:54:55 Download gff for BO05156.5prime
Subject Subject Range Query Range Percent Splice Strand
arm_2R 2536778..2537083 12..316 99 -> Plus
arm_2R 2539494..2539637 317..460 100 -> Plus
arm_2R 2539693..2540118 461..886 100   Plus

BO05156.complete Sequence

934 bp (934 high quality bases) assembled on 2005-09-13

GenBank Submission: FJ629988

> BO05156.complete
GAAGTTATCAGTCGACATGGCTCCCACAACCAGTCCGCCACCCAAGCTGG
CCAAGTTCAAGTCCTCGTCGCTGGACCACGAGATCTACACGGCCAATCGC
CGCGGCACCATTGCAACGGCCTCCAGCGACTGGAAGGCGCTCCGCGGAGG
CGTCGGTGGAGGAGCAGGAGGACCCGGTAGCGTACCCAATCCCTCTAACG
GACGCTCCCTTCACGCCGGCGGACCCATGACACGGGCCGCCTCCACATCC
TCGCTGGCTAGCAGTACGCGCACGATGACTAACTACCAGGAGTACAAAAT
GGATATCATCAACCAGGGGAAATGTCTGTGTGGTCAGTACATCAGAGCGC
GGCTGCGACGGGCAGGAGTCCTCAACCGGAAGGTGACACAGCGTTTGCGC
AACATCCTGGACCCCGGCTCCTCGCACGTGGTCTATGAAGTTTTCCCGGC
ACTGAACAGCATGGGCGAGGAACTGGAGCGGATGCACCCGCGGGTGTACA
CAAACATATCGCGACAGCTGTCGAGGGCCCCGTTTGGCGAGCTGGAGGAC
AGCGACATGGCGCCCATGTTGCTCAACCTAGTTGCCAAGGATCTTTTTCG
CTCCAGCATCACCTGGGGCAAGATAATCTCGATATTTGCCGTATGCGGCG
GCTTTGCCATAGACTGCGTGCGCCAGGGACATTTCGACTACCTACAGTGC
CTGATTGACGGTCTGGCTGAGATCATAGAGGACGACCTGGTCTACTGGCT
GATCGACAACGGCGGATGGTTGGGCCTGTCGCGGCACATCCGACCCCGGG
TCGGCGAATTTACGTTCTTGGGATGGTTGACGCTGTTCGTGACTATCTCT
GCAGGCGCATATATGGTCTCAAACGTGTGTCGGCGCATTGGAGGTCAACT
GTATTCGCTGCTGTTCGCAAGCTTTCTAGACCAT

BO05156.complete Blast Records

Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-27 20:56:22
Subject Length Description Subject Range Query Range Score Percent Strand
Debcl-RA 903 CG33134-PA 1..900 17..916 4470 99.8 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 20:56:23
Subject Length Description Subject Range Query Range Score Percent Strand
Debcl-RA 1724 CG33134-RA 625..1525 16..916 4475 99.8 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 20:56:20
Subject Length Description Subject Range Query Range Score Percent Strand
2R 25286936 2R 6652188..6652643 461..916 2280 100 Plus
2R 25286936 2R 6649278..6649579 16..317 1480 99.3 Plus
2R 25286936 2R 6651985..6652132 313..460 740 100 Plus
Blast to na_te.dros performed on 2014-11-27 20:56:21 has no hits.

BO05156.complete Sim4 Records

Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-21 22:35:36 Download gff for BO05156.complete
Subject Subject Range Query Range Percent Splice Strand
debcl-RA 1..903 17..917 99   Plus
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-11 07:03:24 Download gff for BO05156.complete
Subject Subject Range Query Range Percent Splice Strand
debcl-RA 533..1444 12..924 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 19:15:48 Download gff for BO05156.complete
Subject Subject Range Query Range Percent Splice Strand
debcl-RA 626..1525 17..918 99   Plus
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 22:35:36 Download gff for BO05156.complete
Subject Subject Range Query Range Percent Splice Strand
debcl-RA 533..1444 12..924 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 21:31:23 Download gff for BO05156.complete
Subject Subject Range Query Range Percent Splice Strand
Debcl-RA 626..1525 17..918 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 21:31:23 Download gff for BO05156.complete
Subject Subject Range Query Range Percent Splice Strand
2R 6649279..6649578 17..316 99 -> Plus
2R 6651989..6652132 317..460 100 -> Plus
2R 6652188..6652643 461..918 99   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 19:15:48 Download gff for BO05156.complete
Subject Subject Range Query Range Percent Splice Strand
arm_2R 2536784..2537083 17..316 99 -> Plus
arm_2R 2539494..2539637 317..460 100 -> Plus
arm_2R 2539693..2540148 461..918 99   Plus

BO05156.pep Sequence

Translation from 16 to 934

> BO05156.pep
MAPTTSPPPKLAKFKSSSLDHEIYTANRRGTIATASSDWKALRGGVGGGA
GGPGSVPNPSNGRSLHAGGPMTRAASTSSLASSTRTMTNYQEYKMDIINQ
GKCLCGQYIRARLRRAGVLNRKVTQRLRNILDPGSSHVVYEVFPALNSMG
EELERMHPRVYTNISRQLSRAPFGELEDSDMAPMLLNLVAKDLFRSSITW
GKIISIFAVCGGFAIDCVRQGHFDYLQCLIDGLAEIIEDDLVYWLIDNGG
WLGLSRHIRPRVGEFTFLGWLTLFVTISAGAYMVSNVCRRIGGQLYSLLF
ASFLDH

BO05156.pep Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 18:42:29
Subject Length Description Subject Range Query Range Score Percent Strand
Debcl-PA 300 CG33134-PA 1..300 1..300 1572 100 Plus
Buffy-PA 299 CG8238-PA 88..296 96..303 523 45.5 Plus