Clone BO05182 Report

Search the DGRC for BO05182

Clone and Library Details

Library:BO
Tissue Source:D. melanogaster
Created by:Joe Carlson
Date Registered:2004-06-03
Comments:Infusion clones with open reading frames
Original Plate Number:51
Well:82
Vector:pDNR-Dual
Associated Gene/TranscriptEip63E-RA
Protein status:BO05182.pep: validated full length
Sequenced Size:1561

Clone Sequence Records

BO05182.3prime Sequence

891 bp (870 high quality bases) assembled on 2005-12-02

> BO05182.3prime
ATGGTCTAGAAAGCTTGCTTTATTCTGTCGATTTGGCTCCGTGTAAAGCT
GCACGCCTTCCACGGTGAAAATTGAGGTTTCGTCTGGCAATTCGTAGAGT
TTCTTTGGCAACTGCGCAAAGTACGGATGCTGCAGTGCATCATCGGCGCC
CAAACGCTGCTCCGGATTCAGTTGCAGGAAGCCGTTAGCTATCGTCTCGC
CCTCGATGATGTCGTATAGCCGTGGGAAGTTGTGACCCAGTTTCCGTGGT
CGATAGAAACCCAGCTTGTGTGGCTTGTAGCCGGGAAAGTGGGTGACTCC
CGGCCACGTGTCCTCGGTGGGCGTGCCCAGCAATTTGAATATCTTGTCCA
GCTGATCGTAGGTATCACGTATGCCCGGAAACGTCGGCATCCCGGTCACC
ATCTCCACGAAGATGCAGCCCACGCCCCACATGTCCAGCGAGGTCGAGTA
CTCCGTGCTGCCCAGCAGGACATCTGGAGGGCGGTACCATAACGTGACCA
CCTCGTGGGAGTAGGTGTGGCTGGGCACGCTCTTGGCCCTGGCCAGTCCG
AAATCGGCCAACTTCAGTTCGCCGCAGTCGCTAATAAGCAGGTTCTGCGG
CTTGACATCCCGATGGAGGACACGCCGCTTGTGGCAGTAGGAGAGTCCAC
GGAGCAGCTGGAAGAGGAACAGGCGCACGTTGCGATGATCCAGGCCGCCC
GGATGCTTCTCCATGTATTGCGACAGATCCGTATTCACATATTCAAAGAC
AAAGGTCAGCGTCTCGCGCGTGTGGACAATGTCGTGCAGCGTGACGATGT
TGCTGTGTTTCAGTTCTTTCAGCAGCGAGGCCTCGCGAATCGCGGTGAAG
GGTGCTCCCTCCTCCTCCTGCAGGCGAATCTCCTTCAGCGC

BO05182.3prime Blast Records

Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 12:18:55
Subject Length Description Subject Range Query Range Score Percent Strand
CG10579-PF 1530 Eip63E-RF 655..1527 891..19 4365 100 Minus
CG10579-PG 1569 Eip63E-RG 694..1566 891..19 4365 100 Minus
CG10579-PH 1506 Eip63E-RH 631..1503 891..19 4365 100 Minus
CG10579-PI 1569 Eip63E-RI 694..1566 891..19 4365 100 Minus
CG10579-PJ 1530 Eip63E-RJ 655..1527 891..19 4365 100 Minus
CG10579-PK 1569 Eip63E-RK 694..1566 891..19 4365 100 Minus
CG10579-PD 1569 Eip63E-RD 694..1566 891..19 4365 100 Minus
CG10579-PE 1569 Eip63E-RE 694..1566 891..19 4365 100 Minus
CG10579-PA 1530 Eip63E-RA 655..1527 891..19 4365 100 Minus
CG10579-PB 1530 Eip63E-RB 655..1527 891..19 4365 100 Minus
CG10579-PC 1530 Eip63E-RC 655..1527 891..19 4365 100 Minus
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-11 23:49:35
Subject Length Description Subject Range Query Range Score Percent Strand
Eip63E-RL 3311 CG10579-RL 1453..2325 891..19 4365 100 Minus
Eip63E-RN 3575 CG10579-RN 1717..2589 891..19 4365 100 Minus
Eip63E-RM 4914 CG10579-RM 1084..1956 891..19 4365 100 Minus
Blast to na_all.dmel.RELEASE6 performed 2015-02-11 23:49:28
Subject Length Description Subject Range Query Range Score Percent Strand
3L 28110227 3L 3598359..3598621 736..474 1315 100 Minus
3L 28110227 3L 3600010..3600227 476..259 1090 100 Minus
3L 28110227 3L 3600311..3600491 261..81 905 100 Minus
3L 28110227 3L 3598084..3598239 891..736 780 100 Minus
3L 28110227 3L 3607501..3607563 81..19 315 100 Minus
Blast to na_te.dros performed on 2015-02-11 23:49:32 has no hits.

BO05182.3prime Sim4 Records

Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 02:19:15 Download gff for BO05182.3prime
Subject Subject Range Query Range Percent Splice Strand
CG10579-PC 655..1530 16..891 99   Minus
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 00:39:47 Download gff for BO05182.3prime
Subject Subject Range Query Range Percent Splice Strand
CG10579-PC 655..1530 16..891 99   Minus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-28 02:38:19 Download gff for BO05182.3prime
Subject Subject Range Query Range Percent Splice Strand
Eip63E-RM 1084..1964 11..891 99   Minus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-12 01:59:49 Download gff for BO05182.3prime
Subject Subject Range Query Range Percent Splice Strand
Eip63E-RM 1084..1964 11..891 99   Minus
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-12 01:59:49 Download gff for BO05182.3prime
Subject Subject Range Query Range Percent Splice Strand
3L 3600013..3600225 261..473 100 -> Minus
3L 3600312..3600491 81..260 100 -> Minus
3L 3607502..3607571 11..80 94   Minus
3L 3598084..3598239 736..891 100 -> Minus
3L 3598360..3598621 474..735 100 -> Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-28 02:38:19 Download gff for BO05182.3prime
Subject Subject Range Query Range Percent Splice Strand
arm_3L 3598084..3598239 736..891 100 -> Minus
arm_3L 3598360..3598621 474..735 100 -> Minus
arm_3L 3600013..3600225 261..473 100 -> Minus
arm_3L 3600312..3600491 81..260 100 -> Minus
arm_3L 3607502..3607571 11..80 94   Minus

BO05182.5prime Sequence

954 bp (813 high quality bases) assembled on 2005-12-02

> BO05182.5prime
GAAGTTATCAGTCGACATGGCCGAATTAATCAGTCAGCCCACTAAAATTA
ACAACAATAATTTTGGTGCCGGCGTCACAATGCGCGAGAAAAAGGGAGGA
GCCCTTCAGAAGCTCAAGAAGAGACTTTCGCACAGCTTCGGCAGATTAAC
AATTTCCCGCGAAGATGGCGACGAGTCGACGCACCACCATCACCACCACC
ATCATCATCGCGGTGGACATGGCGGGCACCACAACCACGGTAACAAAGTT
CCATACAACGGCTACAATTCGGAGGAATACTTGGACCGACTCGAACCGAA
TGGCAATATACCCGCTGACAAGACAAATTGCAGATATGGAGACTGGCGCA
GCACGGACAGCACCGACCACCACGATCGCGTCCAGAGACAGCTTTCCGTG
TCCTCCGACAGCAAGTTGCTCGACGAGGACATTCGCGAGGAGATGAAGTA
CCATTCGCACGTGGTCATGCGTCCCAAGAAGCCGCCCAGACCCAAATCCG
AGGTCTTTCTGAACAAACAGGAAACGCATCCGCGCCGGAAACGATTCAGT
GCATTTGGTGGCGACTCCCCATTTGGCAAGCAGGAGGCCTATGTTAAACT
CGAGCCGCTGGGCGAAGGCTCCTATGCGACGGTCTACAAAGGATTTAGCA
AATTAACCTACCAGCGGGTGGCGCTGAAGGAGATTCGCCTGCAGGAGGAG
GAGGGAGCACCCTTCACCGCGATTCGCGAGGCCTCGCTGCTGAAAGAACT
GAAACACAGCAACATCGTCACGCTGCACGACATTGTCCACACGCGCGAGA
CGCTGACCTTTGTCTTTGAATATGTGAATACGGATCTGTCGCAATACATG
GAGAAGCATCCGGGCGGCCTGGATCATCGCAACGTGCGCCTGTTCCTCTT
CCAGCTGCTCCGTGGAACTCTCTACTGCCACAAAGCGGCGTGTCCTCCAT
CGGG

BO05182.5prime Blast Records

Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 12:18:55
Subject Length Description Subject Range Query Range Score Percent Strand
CG10579-PJ 1530 Eip63E-RJ 1..900 17..916 4500 100 Plus
CG10579-PA 1530 Eip63E-RA 1..900 17..916 4500 100 Plus
CG10579-PB 1530 Eip63E-RB 1..900 17..916 4500 100 Plus
CG10579-PC 1530 Eip63E-RC 1..900 17..916 4500 100 Plus
CG10579-PF 1530 Eip63E-RF 55..900 71..916 4230 100 Plus
CG10579-PG 1569 Eip63E-RG 363..939 340..916 2885 100 Plus
CG10579-PI 1569 Eip63E-RI 363..939 340..916 2885 100 Plus
CG10579-PK 1569 Eip63E-RK 363..939 340..916 2885 100 Plus
CG10579-PD 1569 Eip63E-RD 363..939 340..916 2885 100 Plus
CG10579-PE 1569 Eip63E-RE 363..939 340..916 2885 100 Plus
CG10579-PH 1506 Eip63E-RH 300..876 340..916 2885 100 Plus
CG10579-PG 1569 Eip63E-RG 1..325 17..341 1625 100 Plus
CG10579-PI 1569 Eip63E-RI 1..325 17..341 1625 100 Plus
CG10579-PK 1569 Eip63E-RK 1..325 17..341 1625 100 Plus
CG10579-PD 1569 Eip63E-RD 55..325 71..341 1355 100 Plus
CG10579-PE 1569 Eip63E-RE 55..325 71..341 1355 100 Plus
CG10579-PH 1506 Eip63E-RH 1..262 80..341 1310 100 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-12 06:36:09
Subject Length Description Subject Range Query Range Score Percent Strand
Eip63E-RC 2891 CG10579-RC 377..1315 15..954 4630 99.7 Plus
Eip63E-RB 2919 CG10579-RB 405..1343 15..954 4630 99.7 Plus
Eip63E-RA 2700 CG10579-RA 186..1124 15..954 4630 99.7 Plus
Blast to na_all.dmel.RELEASE6 performed 2015-02-12 06:36:01
Subject Length Description Subject Range Query Range Score Percent Strand
3L 28110227 3L 3593327..3593547 340..560 1105 100 Plus
3L 28110227 3L 3578289..3578480 150..341 960 100 Plus
3L 28110227 3L 3598061..3598239 648..826 880 99.4 Plus
3L 28110227 3L 3598359..3598486 826..954 520 95.3 Plus
3L 28110227 3L 3594651..3594742 560..651 460 100 Plus
3L 28110227 3L 3552786..3552864 71..149 395 100 Plus
3L 28110227 3L 3546075..3546132 15..72 290 100 Plus
Blast to na_te.dros performed on 2015-02-12 06:36:05 has no hits.

BO05182.5prime Sim4 Records

Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 02:19:16 Download gff for BO05182.5prime
Subject Subject Range Query Range Percent Splice Strand
CG10579-PA 1..937 17..954 99   Plus
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 00:39:48 Download gff for BO05182.5prime
Subject Subject Range Query Range Percent Splice Strand
CG10579-PB 1..937 17..954 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-29 05:28:38 Download gff for BO05182.5prime
Subject Subject Range Query Range Percent Splice Strand
Eip63E-RA 186..1124 15..954 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-12 08:09:23 Download gff for BO05182.5prime
Subject Subject Range Query Range Percent Splice Strand
Eip63E-RA 186..1124 15..954 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-12 08:09:23 Download gff for BO05182.5prime
Subject Subject Range Query Range Percent Splice Strand
3L 3598065..3598239 652..826 100 -> Plus
3L 3598360..3598486 827..954 97   Plus
3L 3546070..3546131 9..71 95 -> Plus
3L 3552787..3552864 72..149 100 -> Plus
3L 3578289..3578480 150..341 100 -> Plus
3L 3593329..3593546 342..559 100 -> Plus
3L 3594651..3594742 560..651 100 -> Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-29 05:28:38 Download gff for BO05182.5prime
Subject Subject Range Query Range Percent Splice Strand
arm_3L 3546070..3546131 9..71 95 -> Plus
arm_3L 3552787..3552864 72..149 100 -> Plus
arm_3L 3578289..3578480 150..341 100 -> Plus
arm_3L 3593329..3593546 342..559 100 -> Plus
arm_3L 3594651..3594742 560..651 100 -> Plus
arm_3L 3598065..3598239 652..826 100 -> Plus
arm_3L 3598360..3598486 827..954 97   Plus

BO05182.complete Sequence

1561 bp (1561 high quality bases) assembled on 2005-09-13

GenBank Submission: FJ629994

> BO05182.complete
GAAGTTATCAGTCGACATGGCCGAATTAATCAGTCAGCCCACTAAAATTA
ACAACAATAATTTTGGTGCCGGCGTCACAATGCGCGAGAAAAAGGGAGGA
GCCCTTCAGAAGCTCAAGAAGAGACTTTCGCACAGCTTCGGCAGATTAAC
AATTTCCCGCGAAGATGGCGACGAGTCGACGCACCACCATCACCACCACC
ATCATCATCGCGGTGGACATGGCGGGCACCACAACCACGGTAACAAAGTT
CCATACAACGGCTACAATTCGGAGGAATACTTGGACCGACTCGAACCGAA
TGGCAATATACCCGCTGACAAGACAAATTGCAGATATGGAGACTGGCGCA
GCACGGACAGCACCGACCACCACGATCGCGTCCAGAGACAGCTTTCCGTG
TCCTCCGACAGCAAGTTGCTCGACGAGGACATTCGCGAGGAGATGAAGTA
CCATTCGCACGTGGTCATGCGTCCCAAGAAGCCGCCCAGACCCAAATCCG
AGGTCTTTCTGAACAAACAGGAAACGCATCCGCGCCGGAAACGATTCAGT
GCATTTGGTGGCGACTCCCCATTTGGCAAGCAGGAGGCCTATGTTAAACT
CGAGCCGCTGGGCGAAGGCTCCTATGCGACGGTCTACAAAGGATTTAGCA
AATTAACCTACCAGCGGGTGGCGCTGAAGGAGATTCGCCTGCAGGAGGAG
GAGGGAGCACCCTTCACCGCGATTCGCGAGGCCTCGCTGCTGAAAGAACT
GAAACACAGCAACATCGTCACGCTGCACGACATTGTCCACACGCGCGAGA
CGCTGACCTTTGTCTTTGAATATGTGAATACGGATCTGTCGCAATACATG
GAGAAGCATCCGGGCGGCCTGGATCATCGCAACGTGCGCCTGTTCCTCTT
CCAGCTGCTCCGTGGACTCTCCTACTGCCACAAGCGGCGTGTCCTCCATC
GGGATGTCAAGCCGCAGAACCTGCTTATTAGCGACTGCGGCGAACTGAAG
TTGGCCGATTTCGGACTGGCCAGGGCCAAGAGCGTGCCCAGCCACACCTA
CTCCCACGAGGTGGTCACGTTATGGTACCGCCCTCCAGATGTCCTGCTGG
GCAGCACGGAGTACTCGACCTCGCTGGACATGTGGGGCGTGGGCTGCATC
TTCGTGGAGATGGTGACCGGGATGCCGACGTTTCCGGGCATACGTGATAC
CTACGATCAGCTGGACAAGATATTCAAATTGCTGGGCACGCCCACCGAGG
ACACGTGGCCGGGAGTCACCCACTTTCCCGGCTACAAGCCACACAAGCTG
GGTTTCTATCGACCACGGAAACTGGGTCACAACTTCCCACGGCTATACGA
CATCATCGAGGGCGAGACGATAGCTAACGGCTTCCTGCAACTGAATCCGG
AGCAGCGTTTGGGCGCCGATGATGCACTGCAGCATCCGTACTTTGCGCAG
TTGCCAAAGAAACTCTACGAATTGCCAGACGAAACCTCAATTTTCACCGT
GGAAGGCGTGCAGCTTTACACGGAGCCAAATCGACAGAATAAAGCAAGCT
TTCTAGACCAT

BO05182.complete Blast Records

Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 08:35:26
Subject Length Description Subject Range Query Range Score Percent Strand
Eip63E-RC 1530 CG10579-PC 1..1527 17..1543 7635 100 Plus
Eip63E-RB 1530 CG10579-PB 1..1527 17..1543 7635 100 Plus
Eip63E-RA 1530 CG10579-PA 1..1527 17..1543 7635 100 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 08:35:28
Subject Length Description Subject Range Query Range Score Percent Strand
Eip63E-RC 2891 CG10579-RC 377..1905 15..1543 7645 100 Plus
Eip63E-RB 2919 CG10579-RB 405..1933 15..1543 7645 100 Plus
Eip63E-RA 2700 CG10579-RA 186..1714 15..1543 7645 100 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 08:35:24
Subject Length Description Subject Range Query Range Score Percent Strand
3L 28110227 3L 3598359..3598621 826..1088 1315 100 Plus
3L 28110227 3L 3593327..3593547 340..560 1105 100 Plus
3L 28110227 3L 3600010..3600227 1086..1303 1090 100 Plus
3L 28110227 3L 3578289..3578480 150..341 960 100 Plus
3L 28110227 3L 3600311..3600491 1301..1481 905 100 Plus
3L 28110227 3L 3598061..3598239 648..826 880 99.4 Plus
3L 28110227 3L 3594651..3594742 560..651 460 100 Plus
3L 28110227 3L 3552786..3552864 71..149 395 100 Plus
3L 28110227 3L 3607501..3607563 1481..1543 315 100 Plus
3L 28110227 3L 3546075..3546132 15..72 290 100 Plus
Blast to na_te.dros performed on 2014-11-28 08:35:26 has no hits.

BO05182.complete Sim4 Records

Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-21 22:35:34 Download gff for BO05182.complete
Subject Subject Range Query Range Percent Splice Strand
Eip63E-RK 1..324 17..341 99 -> Plus
Eip63E-RK 365..1569 342..1546 99   Plus
Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-07-28 16:58:30 Download gff for BO05182.complete
Subject Subject Range Query Range Percent Splice Strand
Eip63E-RK 739..1940 342..1545 99   Plus
Eip63E-RK 375..698 17..341 99 -> Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:23:21 Download gff for BO05182.complete
Subject Subject Range Query Range Percent Splice Strand
Eip63E-RA 188..1714 17..1545 99   Plus
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 22:35:34 Download gff for BO05182.complete
Subject Subject Range Query Range Percent Splice Strand
Eip63E-RK 368..698 9..341 98 -> Plus
Eip63E-RK 739..1948 342..1551 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 09:21:09 Download gff for BO05182.complete
Subject Subject Range Query Range Percent Splice Strand
Eip63E-RA 188..1714 17..1545 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 09:21:09 Download gff for BO05182.complete
Subject Subject Range Query Range Percent Splice Strand
3L 3598360..3598621 827..1088 100 -> Plus
3L 3600013..3600225 1089..1301 100 -> Plus
3L 3600312..3600491 1302..1481 100 -> Plus
3L 3607502..3607563 1482..1545 96   Plus
3L 3546077..3546131 17..71 100 -> Plus
3L 3552787..3552864 72..149 100 -> Plus
3L 3578289..3578480 150..341 100 -> Plus
3L 3593329..3593546 342..559 100 -> Plus
3L 3594651..3594742 560..651 100 -> Plus
3L 3598065..3598239 652..826 100 -> Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:23:21 Download gff for BO05182.complete
Subject Subject Range Query Range Percent Splice Strand
arm_3L 3600013..3600225 1089..1301 100 -> Plus
arm_3L 3600312..3600491 1302..1481 100 -> Plus
arm_3L 3607502..3607563 1482..1545 96   Plus
arm_3L 3546077..3546131 17..71 100 -> Plus
arm_3L 3552787..3552864 72..149 100 -> Plus
arm_3L 3578289..3578480 150..341 100 -> Plus
arm_3L 3593329..3593546 342..559 100 -> Plus
arm_3L 3594651..3594742 560..651 100 -> Plus
arm_3L 3598065..3598239 652..826 100 -> Plus
arm_3L 3598360..3598621 827..1088 100 -> Plus

BO05182.pep Sequence

Translation from 16 to 1561

> BO05182.pep
MAELISQPTKINNNNFGAGVTMREKKGGALQKLKKRLSHSFGRLTISRED
GDESTHHHHHHHHHRGGHGGHHNHGNKVPYNGYNSEEYLDRLEPNGNIPA
DKTNCRYGDWRSTDSTDHHDRVQRQLSVSSDSKLLDEDIREEMKYHSHVV
MRPKKPPRPKSEVFLNKQETHPRRKRFSAFGGDSPFGKQEAYVKLEPLGE
GSYATVYKGFSKLTYQRVALKEIRLQEEEGAPFTAIREASLLKELKHSNI
VTLHDIVHTRETLTFVFEYVNTDLSQYMEKHPGGLDHRNVRLFLFQLLRG
LSYCHKRRVLHRDVKPQNLLISDCGELKLADFGLARAKSVPSHTYSHEVV
TLWYRPPDVLLGSTEYSTSLDMWGVGCIFVEMVTGMPTFPGIRDTYDQLD
KIFKLLGTPTEDTWPGVTHFPGYKPHKLGFYRPRKLGHNFPRLYDIIEGE
TIANGFLQLNPEQRLGADDALQHPYFAQLPKKLYELPDETSIFTVEGVQL
YTEPNRQNKASFLDH

BO05182.pep Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 18:42:31
Subject Length Description Subject Range Query Range Score Percent Strand
Eip63E-PC 509 CG10579-PC 1..509 1..509 2752 100 Plus
Eip63E-PB 509 CG10579-PB 1..509 1..509 2752 100 Plus
Eip63E-PA 509 CG10579-PA 1..509 1..509 2752 100 Plus
Eip63E-PJ 509 CG10579-PJ 1..509 1..509 2752 100 Plus
Eip63E-PL 522 CG10579-PL 1..522 1..509 2728 97.5 Plus