Clone Sequence Records
BO05231.3prime Sequence
308 bp (307 high quality bases) assembled on 2005-12-02
> BO05231.3prime
ATGGTCTAGAAAGCTTGCCTCTCTGTTTAAGTGGGCGCCAGTGTCCGTGG
ACAGGCAGCCGGCACCACCACCGAAACCGTATCCCTTGGGACCGTATTTG
CGACCATGGCAGTTTTTGCAGAAAAGCTCCTTCTCGTGCTCCGTGCAGTT
GGTCGAGTCCAGGGCCTTGTTGCACATGCTGCACTTGAAGCAGGTCTTGT
GGAATTTGTAGCCTCCGGCAACGCGCTCCTCGGCAGCGTAGACCGACTTG
CCGCACGCGGGGCACTTGGGGGTTTCAACGGGAACGAAAGGCATGTCGAC
TGATAACT
BO05231.3prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 12:19:32
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG33149-PA | 279 | Mlp60A-RA | 1..276 | 294..19 | 1380 | 100 | Minus |
CG1019-PA | 1488 | Mlp84B-RA | 93..165 | 205..133 | 190 | 90.4 | Minus |
CG1019-PB | 1488 | Mlp84B-RB | 93..165 | 205..133 | 190 | 90.4 | Minus |
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-13 02:22:41
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Mlp60A-RE | 440 | CG42309-RE | 83..358 | 294..19 | 1380 | 100 | Minus |
Mlp60A-RF | 670 | CG42309-RF | 50..325 | 294..19 | 1380 | 100 | Minus |
Mlp60A-RC | 2468 | CG42309-RC | 493..767 | 294..20 | 1375 | 100 | Minus |
Blast to na_all.dmel.RELEASE6 performed 2015-02-13 02:22:37
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
2R | 25286936 | 2R | 24075449..24075609 | 179..19 | 805 | 100 | Minus |
2R | 25286936 | 2R | 24075223..24075338 | 294..179 | 580 | 100 | Minus |
3R | 32079331 | 3R | 7115504..7115734 | 42..272 | 420 | 78.8 | Plus |
Blast to na_te.dros performed on 2015-02-13 02:22:39 has no hits.
BO05231.3prime Sim4 Records
Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 02:19:54 Download gff for
BO05231.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG33149-PA | 1..279 | 15..294 | 99 | | Minus |
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 00:40:43 Download gff for
BO05231.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG33149-PA | 1..279 | 15..294 | 99 | | Minus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-09-01 06:36:31 Download gff for
BO05231.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
Mlp60A-RE | 73..362 | 14..303 | 98 | | Minus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-13 06:22:34 Download gff for
BO05231.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
Mlp60A-RF | 40..329 | 14..303 | 98 | | Minus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-13 06:22:34 Download gff for
BO05231.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
2R | 24075213..24075337 | 180..303 | 97 | -> | Minus |
2R | 24075449..24075613 | 14..179 | 98 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-09-01 06:36:31 Download gff for
BO05231.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_2R | 19962736..19962860 | 180..303 | 97 | -> | Minus |
arm_2R | 19962972..19963136 | 14..179 | 98 | | Minus |
BO05231.5prime Sequence
308 bp (307 high quality bases) assembled on 2005-12-02
> BO05231.5prime
GAAGTTATCAGTCGACATGCCTTTCGTTCCCGTTGAAACCCCCAAGTGCC
CCGCGTGCGGCAAGTCGGTCTACGCTGCCGAGGAGCGCGTTGCCGGAGGC
TACAAATTCCACAAGACCTGCTTCAAGTGCAGCATGTGCAACAAGGCCCT
GGACTCGACCAACTGCACGGAGCACGAGAAGGAGCTTTTCTGCAAAAACT
GCCATGGTCGCAAATACGGTCCCAAGGGATACGGTTTCGGTGGTGGTGCC
GGCTGCCTGTCCACGGACACTGGCGCCCACTTAAACAGAGAGGCAAGCTT
TCTAGACC
BO05231.5prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 12:19:32
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG33149-PA | 279 | Mlp60A-RA | 1..276 | 17..292 | 1380 | 100 | Plus |
CG1019-PA | 1488 | Mlp84B-RA | 93..165 | 106..178 | 190 | 90.4 | Plus |
CG1019-PB | 1488 | Mlp84B-RB | 93..165 | 106..178 | 190 | 90.4 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-13 05:48:24
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Mlp60A-RE | 440 | CG42309-RE | 83..358 | 17..292 | 1380 | 100 | Plus |
Mlp60A-RF | 670 | CG42309-RF | 50..325 | 17..292 | 1380 | 100 | Plus |
Mlp60A-RC | 2468 | CG42309-RC | 493..767 | 17..291 | 1375 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2015-02-13 05:48:23
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
2R | 25286936 | 2R | 24075449..24075609 | 132..292 | 805 | 100 | Plus |
2R | 25286936 | 2R | 24075223..24075338 | 17..132 | 580 | 100 | Plus |
3R | 32079331 | 3R | 7115504..7115734 | 269..39 | 420 | 78.8 | Minus |
Blast to na_te.dros performed on 2015-02-13 05:48:24 has no hits.
BO05231.5prime Sim4 Records
Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 02:19:55 Download gff for
BO05231.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG33149-PA | 1..279 | 17..296 | 99 | | Plus |
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 00:40:45 Download gff for
BO05231.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG33149-PA | 1..279 | 17..296 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-09-01 17:56:25 Download gff for
BO05231.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
Mlp60A-RE | 73..362 | 8..297 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-13 08:04:44 Download gff for
BO05231.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
Mlp60A-RF | 40..329 | 8..297 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-13 08:04:44 Download gff for
BO05231.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
2R | 24075213..24075337 | 8..131 | 97 | -> | Plus |
2R | 24075449..24075613 | 132..297 | 98 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-09-01 17:56:25 Download gff for
BO05231.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_2R | 19962736..19962860 | 8..131 | 97 | -> | Plus |
arm_2R | 19962972..19963136 | 132..297 | 98 | | Plus |
BO05231.complete Sequence
310 bp (310 high quality bases) assembled on 2005-09-13
GenBank Submission: FJ630000
> BO05231.complete
GAAGTTATCAGTCGACATGCCTTTCGTTCCCGTTGAAACCCCCAAGTGCC
CCGCGTGCGGCAAGTCGGTCTACGCTGCCGAGGAGCGCGTTGCCGGAGGC
TACAAATTCCACAAGACCTGCTTCAAGTGCAGCATGTGCAACAAGGCCCT
GGACTCGACCAACTGCACGGAGCACGAGAAGGAGCTTTTCTGCAAAAACT
GCCATGGTCGCAAATACGGTCCCAAGGGATACGGTTTCGGTGGTGGTGCC
GGCTGCCTGTCCACGGACACTGGCGCCCACTTAAACAGAGAGGCAAGCTT
TCTAGACCAT
BO05231.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-27 16:34:56
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Mlp60A-RE | 279 | CG42309-PE | 1..276 | 17..292 | 1380 | 100 | Plus |
Mlp60A-RF | 279 | CG42309-PF | 1..276 | 17..292 | 1380 | 100 | Plus |
Mlp60A-RC | 1461 | CG42309-PC | 1..275 | 17..291 | 1375 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 16:34:57
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Mlp60A-RE | 440 | CG42309-RE | 83..358 | 17..292 | 1380 | 100 | Plus |
Mlp60A-RF | 670 | CG42309-RF | 50..325 | 17..292 | 1380 | 100 | Plus |
Mlp60A-RC | 2468 | CG42309-RC | 493..767 | 17..291 | 1375 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 16:34:54
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
2R | 25286936 | 2R | 24075449..24075609 | 132..292 | 805 | 100 | Plus |
2R | 25286936 | 2R | 24075223..24075338 | 17..132 | 580 | 100 | Plus |
3R | 32079331 | 3R | 7115504..7115734 | 269..39 | 420 | 78.8 | Minus |
Blast to na_te.dros performed on 2014-11-27 16:34:55 has no hits.
BO05231.complete Sim4 Records
Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-21 23:01:48 Download gff for
BO05231.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
Mlp60A-RE | 1..279 | 17..296 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-11 07:34:07 Download gff for
BO05231.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
Mlp60A-RE | 72..361 | 8..297 | 98 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 18:56:09 Download gff for
BO05231.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
Mlp60A-RE | 83..358 | 17..294 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 23:01:48 Download gff for
BO05231.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
Mlp60A-RE | 72..361 | 8..297 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 17:21:49 Download gff for
BO05231.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
Mlp60A-RF | 50..325 | 17..294 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 17:21:49 Download gff for
BO05231.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
2R | 24075223..24075337 | 17..131 | 100 | -> | Plus |
2R | 24075449..24075609 | 132..294 | 98 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 18:56:09 Download gff for
BO05231.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_2R | 19962972..19963132 | 132..294 | 98 | | Plus |
arm_2R | 19962746..19962860 | 17..131 | 100 | -> | Plus |
BO05231.pep Sequence
Translation from 16 to 310
> BO05231.pep
MPFVPVETPKCPACGKSVYAAEERVAGGYKFHKTCFKCSMCNKALDSTNC
TEHEKELFCKNCHGRKYGPKGYGFGGGAGCLSTDTGAHLNREASFLDH
BO05231.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 18:40:43
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Mlp60A-PE | 92 | CG33149-PA | 1..92 | 1..92 | 530 | 100 | Plus |
Mlp60A-PF | 92 | CG42309-PF | 1..92 | 1..92 | 530 | 100 | Plus |
Mlp60A-PC | 486 | CG42309-PC | 1..92 | 1..92 | 530 | 100 | Plus |
Mlp60A-PB | 486 | CG42309-PB | 1..92 | 1..92 | 530 | 100 | Plus |
Mlp84B-PC | 495 | CG1019-PC | 4..93 | 3..92 | 410 | 76.7 | Plus |
Mlp60A-PC | 486 | CG42309-PC | 213..301 | 11..96 | 207 | 44.9 | Plus |
Mlp60A-PB | 486 | CG42309-PB | 213..301 | 11..96 | 207 | 44.9 | Plus |
Mlp60A-PC | 486 | CG42309-PC | 96..174 | 2..76 | 203 | 45.6 | Plus |
Mlp60A-PB | 486 | CG42309-PB | 96..174 | 2..76 | 203 | 45.6 | Plus |
Mlp60A-PC | 486 | CG42309-PC | 412..484 | 11..82 | 180 | 45.2 | Plus |
Mlp60A-PB | 486 | CG42309-PB | 412..484 | 11..82 | 180 | 45.2 | Plus |
Mlp60A-PC | 486 | CG42309-PC | 299..390 | 2..84 | 173 | 35.9 | Plus |
Mlp60A-PB | 486 | CG42309-PB | 299..390 | 2..84 | 173 | 35.9 | Plus |