Clone BO05301 Report

Search the DGRC for BO05301

Clone and Library Details

Library:BO
Tissue Source:D. melanogaster
Created by:Joe Carlson
Date Registered:2004-06-03
Comments:Infusion clones with open reading frames
Original Plate Number:53
Well:1
Vector:pDNR-Dual
Associated Gene/TranscriptCG15011-RA
Protein status:BO05301.pep: Imported from assembly
Sequenced Size:2554

Clone Sequence Records

BO05301.3prime Sequence

876 bp (818 high quality bases) assembled on 2005-12-02

> BO05301.3prime
ATGGTCTAGAAAGCTTGCACTGTCCGCGTAGAAAGCCACCACAATTGCAC
CCACAACTGTTAGAATGGATACTGCATAGATTGCTCTACGTTGCCAATCG
ATCTTGGTCTTGGCCGGTCCAGAACCCACAGTTTTGCGCTCCTTGTGCTT
GCGTTTGCCGAACTTGGCCTCGAACTTCTCGAGTTCCAGGCGGTTTCTTT
CTTCCTCGTCGCGACGCTTTTGTTCCAGCTGCAGTTGCTCTGCCGCCTGG
ACGCGAATTTGCTCCGCCTTGCAGTTCGAGTCGCAATCCAAGAATGTCTG
ACCAGCACGGTGTTTGTCACAGGCAATCTCCTGCTTGAGTCGCTTGCAGG
CGCAGAAAATGCGAACCTTCTTGCGGCACAACTCGGGATTTGGGCACTTG
CCTGTGTGGCAGATGGCTGTGCAGCGATGTCCGCAAGGATAATTCTTCAA
GCATCGATTACCGCAGCTCCGTAGCTTTTCTCTTCGCTCGATGATCTCCT
GGACCGATCCCGTTTCATCATAATACTCGTTGCACTTGTAAACCAACTGG
TTGAGTCCACAGTGACACTTGGTCTTAATCACAAAGTTGCAGGGCGCACA
GGGCGGTGGATGACATCCTTTGGGACAGGCGTGAATACATCCGGTTGGTC
GGGGAACGGTGCAACCCTCCTCGCAGTTGGCACAGCCAGTTTGCGCAGAC
ATATCCTGGGGAAGCGGTACGAAATGGCAAACCAATGAACACTTGTGATT
GCCGCACTTAAGCTGACGTGCACACGATCGCTGACAGGAAGTGGGTTTGG
AGTTCCAGCATGGCCAAGTGGCAACCTCATGACCTCCGATACAGGTGACA
ATGACGCCTTCCTCGCACCGTGGATG

BO05301.3prime Blast Records

Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 12:19:51
Subject Length Description Subject Range Query Range Score Percent Strand
CG15011-PA 2523 CG15011-RA 1663..2520 876..19 4290 100 Minus
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-13 02:22:53
Subject Length Description Subject Range Query Range Score Percent Strand
CG15011-RA 2631 CG15011-RA 1688..2545 876..19 4290 100 Minus
Blast to na_all.dmel.RELEASE6 performed 2015-02-13 02:22:50
Subject Length Description Subject Range Query Range Score Percent Strand
3L 28110227 3L 4256560..4256994 442..876 2175 100 Plus
3L 28110227 3L 4256077..4256499 19..441 2115 100 Plus
Blast to na_te.dros performed on 2015-02-13 02:22:51 has no hits.

BO05301.3prime Sim4 Records

Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 02:20:16 Download gff for BO05301.3prime
Subject Subject Range Query Range Percent Splice Strand
CG15011-PA 1663..2523 15..876 99   Minus
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 00:41:10 Download gff for BO05301.3prime
Subject Subject Range Query Range Percent Splice Strand
CG15011-PA 1663..2523 15..876 99   Minus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-09-01 06:36:32 Download gff for BO05301.3prime
Subject Subject Range Query Range Percent Splice Strand
CG15011-RA 1688..2548 15..876 99   Minus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-13 06:23:22 Download gff for BO05301.3prime
Subject Subject Range Query Range Percent Splice Strand
CG15011-RA 1688..2548 15..876 99   Minus
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-13 06:23:22 Download gff for BO05301.3prime
Subject Subject Range Query Range Percent Splice Strand
3L 4256560..4256994 442..876 100   Plus
3L 4256073..4256499 15..441 99 <- Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-09-01 06:36:32 Download gff for BO05301.3prime
Subject Subject Range Query Range Percent Splice Strand
arm_3L 4256073..4256499 15..441 99 <- Plus
arm_3L 4256560..4256994 442..876 100   Plus

BO05301.5prime Sequence

945 bp (798 high quality bases) assembled on 2005-12-02

> BO05301.5prime
GAAGTTATCAGTCGACATGGAAAAGTTTAATAAAGCGCAAGCTAAAAATT
TGGCTGCCGCCCAAAAACTGGTGGACACCTACGCCTCCAGCTCCGAGGAT
GAAGGCGAACTGGATGAGAATCACATTTTGGAACTCCTATACAAGAACTA
CAAACCGTCGGACAACGCAGGAAGCTCAAAGGAAGCGGCACGCACCAGTA
CGTTTCTGGAAAACACTCTACACTCGGGAGCGGCAACCTGTCTCATTTGC
ATCGGAAGCATTCGGCGGGTGGAGGCCATTTGGTCTTGCGAGAGCTGTTA
CTGCTTCTTTCACTTGAAGTGCATCCAACGGTGGGCCAACGACAGCATGA
TGCAGATGAAGGTAAAGGCGGCAGAGCAGCAGAACGGCCAGGGCCACTAC
AATCATCTGGGCGAATTTGTGCCGCCCAAGCGACAGAAATCCCTTCACTG
GTGCTGCCCCAAGTGCCGCAGGGACTACCAACCGGCCGATAAGCCCACGC
AGTACAACTGCTTCTGCGGCAAGGAGGTGAACCCCGAGAACCAGCCCTTC
CTTGTGCCCCACTCATGCGGAGAGCACTGCGGAAAGCTTTTGCAACCGAA
GTGTGGGCACGATTGCAAGCTGCTATGTCATCCGGGGCCATGTCCTCCTT
GTGCGCAGCAGGCGCAGGTCTCGTGCCTGTGTGGTAAATCTAGTCCTAGG
TCCGTGAGGTGCATTGACAAGCAGTGGACGTGTCAGCAGACTTGCAAGGA
ACTTCTAGCCTGCGGCAAGCACAAATGTAATCAGGTGTGTCATCAGCCAG
GAAAGTGTCCTCCATGCACCAGCAAAAGCTTACAACCTTGCGAGTGCCAG
CGGGAGTCGAAGATGGTCAACTGCTCCGATCGGAAATGGAAGTGTCAGAA
TGTTTGTGGAGCTCCATTTTGCTTGTGGGTTGCACATTTGCAAGG

BO05301.5prime Blast Records

Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 12:19:52
Subject Length Description Subject Range Query Range Score Percent Strand
CG15011-PA 2523 CG15011-RA 1..903 17..919 4515 100 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-12 10:15:50
Subject Length Description Subject Range Query Range Score Percent Strand
CG15011-RA 2631 CG15011-RA 26..949 17..941 4585 99.8 Plus
Blast to na_all.dmel.RELEASE6 performed 2015-02-12 10:15:48
Subject Length Description Subject Range Query Range Score Percent Strand
3L 28110227 3L 4258336..4258947 742..131 3060 100 Minus
3L 28110227 3L 4258114..4258274 903..743 805 100 Minus
3L 28110227 3L 4259013..4259127 131..17 575 100 Minus
Blast to na_te.dros performed on 2015-02-12 10:15:49 has no hits.

BO05301.5prime Sim4 Records

Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 02:20:16 Download gff for BO05301.5prime
Subject Subject Range Query Range Percent Splice Strand
CG15011-PA 1..927 17..945 99   Plus
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 00:41:11 Download gff for BO05301.5prime
Subject Subject Range Query Range Percent Splice Strand
CG15011-PA 1..927 17..945 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-29 20:55:10 Download gff for BO05301.5prime
Subject Subject Range Query Range Percent Splice Strand
CG15011-RA 26..952 17..945 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-12 12:59:45 Download gff for BO05301.5prime
Subject Subject Range Query Range Percent Splice Strand
CG15011-RA 26..952 17..945 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-12 12:59:45 Download gff for BO05301.5prime
Subject Subject Range Query Range Percent Splice Strand
3L 4258116..4258274 743..901 100 <- Minus
3L 4258336..4258946 132..742 100 <- Minus
3L 4259013..4259127 17..131 100   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-29 20:55:10 Download gff for BO05301.5prime
Subject Subject Range Query Range Percent Splice Strand
arm_3L 4258116..4258274 743..901 100 <- Minus
arm_3L 4258336..4258946 132..742 100 <- Minus
arm_3L 4259013..4259127 17..131 100   Minus

BO05301.complete Sequence

2554 bp assembled on 2008-08-14

GenBank Submission: FJ630008

> BO05301.complete
GAAGTTATCAGTCGACATGGAAAAGTTTAATAAAGCGCAAGCTAAAAATT
TGGCTGCCGCCCAAAAACTGGTGGACACCTACGCCTCCAGCTCCGAGGAT
GAAGGCGAACTGGATGAGAATCACATTTTGGAACTCCTATACAAGAACTA
CAAACCGTCGGACAACGCAGGAAGCTCAAAGGAAGCGGCACGCACCAGTA
CGTTTCTGGAAAACACTCTACACTCGGGAGCGGCAACCTGTCTCATTTGC
ATCGGAAGCATTCGGCGGGTGGAGGCCATTTGGTCTTGCGAGAGCTGTTA
CTGCTTCTTTCACTTGAAGTGCATCCAACGGTGGGCCAACGACAGCATGA
TGCAGATGAAGGTAAAGGCGGCAGAGCAGCAGAACGGCCAGGGCCACTAC
AATCATCTGGGCGAATTTGTGCCGCCCAAGCGACAGAAATCCCTTCACTG
GTGCTGCCCCAAGTGCCGCAGGGACTACCAACCGGCCGATAAGCCCACGC
AGTACAACTGCTTCTGCGGCAAGGAGGTGAACCCCGAGAACCAGCCCTTC
CTTGTGCCCCACTCATGCGGAGAGCACTGCGGAAAGCTTTTGCAACCGAA
GTGTGGGCACGATTGCAAGCTGCTATGTCATCCGGGGCCATGTCCTCCTT
GTGCGCAGCAGGCGCAGGTCTCGTGCCTGTGTGGTAAATCTAGTCCTAGG
TCCGTGAGGTGCATTGACAAGCAGTGGACGTGTCAGCAGACTTGCAAGGA
ACTTCTAGCCTGCGGCAAGCACAAATGTAATCAGGTGTGTCATCAGCCAG
GAAAGTGTCCTCCATGCACCAGCAAAAGCTTACAACCTTGCGAGTGCCAG
CGGGAGTCGAAGATGGTCAACTGCTCCGATCGGAAATGGAAGTGTCAGAA
TGTTTGTGGAGCTCCATTTGCTTGTGGTTTGCACATTTGCGAGAAGGTGT
GTCACGCTGGACCCTGCGGAGATGGAGAGTGTCCTTTGCAAGTCAGGAGT
TGCCCATGCGGCAAGAATACCCAGGTAAGACCCTGTAATGAGACAGAGGA
AACCTGTGGCGATACGTGCCAAAAACTTTTGTCCTGTGGCCAGCACACTT
GCACCCAGCGTTGTCATCGTGGACCTTGCATTTCCTGCCCAATAAGAACC
AAAAAGAAGTGTCGTTGTGGTCTGCACGAAAAGGAGTTGCCCTGCTCCAA
AGAGTTTGCATGCGAGACTAAATGCAAGCAAATGCGTGATTGCGGCAAGC
ATGCATGCAATAGAAAGTGCTGTGGGGACCAGTGTCCACCGTGCGAAAAG
ATTTGTGGCAAGCAGCTGAGCTGCAACAAGCACAAATGTCAGTCCGTGTG
CCACAACGGACCTTGCTATCCGTGTAAACTGGAATCCCAGATTAACTGCC
GCTGTGGAAAGACCAAAAAAAGTGTTCCTTGTGGCAGGGAAAGAAGTGCA
CGCATTGTCTGCTTGGAACTCTGTCGCATAACTCCCAAATGTCACCATGC
CATTAAGCATCGTTGTCACAAGGGTGACTGTCCTCCATGTGGCCAAGTGT
GCGGTCTACCCAATGACACCAGCAAGTGTGGGCACATCTGTAAGGCACGA
TGCCACGAGGCAGTTAGAGTTAATAAACCCAAAGAGGCTAGGCCACAGGC
CAAAAAGTATGAGTATAAGGCATTACCACATCCACGGTGCGAGGAAGGCG
TCATTGTCACCTGTATCGGAGGTCATGAGGTTGCCACTTGGCCATGCTGG
AACTCCAAACCCACTTCCTGTCAGCGATCGTGTGCACGTCAGCTTAAGTG
CGGCAATCACAAGTGTTCATTGGTTTGCCATTTCGTACCGCTTCCCCAGG
ATATGTCTGCGCAAACTGGCTGTGCCAACTGCGAGGAGGGTTGCACCGTT
CCCCGACCAACCGGATGTATTCACGCCTGTCCCAAAGGATGTCATCCACC
GCCCTGTGCGCCCTGCAACTTTGTGATTAAGACCAAGTGTCACTGTGGAC
TCAACCAGTTGGTTTACAAGTGCAACGAGTATTATGATGAAACGGGATCG
GTCCAGGAGATCATCGAGCGAAGAGAAAAGCTACGGAGCTGCGGTAATCG
ATGCTTGAAGAATTATCCTTGCGGACATCGCTGCACAGCCATCTGCCACA
CAGGCAAGTGCCCAAATCCCGAGTTGTGCCGCAAGAAGGTTCGCATTTTC
TGCGCCTGCAAGCGACTCAAGCAGGAGATTGCCTGTGACAAACACCGTGC
TGGTCAGACATTCTTGGATTGCGACTCGAACTGCAAGGCGGAGCAAATTC
GCGTCCAGGCGGCAGAGCAACTGCAGCTGGAACAAAAGCGTCGCGACGAG
GAAGAAAGAAACCGCCTGGAACTCGAGAAGTTCGAGGCCAAGTTCGGCAA
ACGCAAGCACAAGGAGCGCAAAACTGTGGGTTCTGGACCGGCCAAGACCA
AGATCGATTGGCAACGTAGAGCAATCTATGCAGTATCCATTCTAACAGTT
GTGGGTGCAATTGTGGTGGCTTTCTACGCGGACAGTGCAAGCTTTCTAGA
CCAT

BO05301.complete Blast Records

Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-27 10:41:17
Subject Length Description Subject Range Query Range Score Percent Strand
CG15011-RA 2523 CG15011-PA 1..2520 17..2536 12600 100 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 10:41:18
Subject Length Description Subject Range Query Range Score Percent Strand
CG15011-RA 2631 CG15011-RA 26..2545 17..2536 12600 100 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 10:41:15
Subject Length Description Subject Range Query Range Score Percent Strand
3L 28110227 3L 4258336..4258947 742..131 3060 100 Minus
3L 28110227 3L 4256560..4257017 2113..1656 2290 100 Minus
3L 28110227 3L 4256077..4256499 2536..2114 2115 100 Minus
3L 28110227 3L 4257312..4257524 1476..1264 1065 100 Minus
3L 28110227 3L 4257076..4257257 1657..1476 910 100 Minus
3L 28110227 3L 4258114..4258274 903..743 805 100 Minus
3L 28110227 3L 4257584..4257715 1267..1136 660 100 Minus
3L 28110227 3L 4257772..4257888 1135..1019 585 100 Minus
3L 28110227 3L 4257946..4258062 1018..902 585 100 Minus
3L 28110227 3L 4259013..4259127 131..17 575 100 Minus
Blast to na_te.dros performed on 2014-11-27 10:41:16 has no hits.

BO05301.complete Sim4 Records

Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-11 07:40:18 Download gff for BO05301.complete
Subject Subject Range Query Range Percent Splice Strand
CG15011-RA 26..2548 17..2540 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 10:33:33 Download gff for BO05301.complete
Subject Subject Range Query Range Percent Splice Strand
CG15011-RA 26..2545 17..2538 99   Plus
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-09-04 11:08:59 Download gff for BO05301.complete
Subject Subject Range Query Range Percent Splice Strand
CG15011-RA 26..2545 17..2538 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 11:28:15 Download gff for BO05301.complete
Subject Subject Range Query Range Percent Splice Strand
CG15011-RA 26..2545 17..2538 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 11:28:15 Download gff for BO05301.complete
Subject Subject Range Query Range Percent Splice Strand
3L 4257076..4257256 1477..1657 100 <- Minus
3L 4257312..4257520 1268..1476 100 <- Minus
3L 4257584..4257715 1136..1267 100 <- Minus
3L 4257772..4257888 1019..1135 100 <- Minus
3L 4257946..4258062 902..1018 100 <- Minus
3L 4258116..4258274 743..901 100 <- Minus
3L 4256075..4256499 2114..2538 99 <- Minus
3L 4256560..4257015 1658..2113 100 <- Minus
3L 4258336..4258946 132..742 100 <- Minus
3L 4259013..4259127 17..131 100   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 10:33:33 Download gff for BO05301.complete
Subject Subject Range Query Range Percent Splice Strand
arm_3L 4257946..4258062 902..1018 100 <- Minus
arm_3L 4258116..4258274 743..901 100 <- Minus
arm_3L 4256075..4256499 2114..2538 99 <- Minus
arm_3L 4256560..4257015 1658..2113 100 <- Minus
arm_3L 4257076..4257256 1477..1657 100 <- Minus
arm_3L 4257312..4257520 1268..1476 100 <- Minus
arm_3L 4257584..4257715 1136..1267 100 <- Minus
arm_3L 4257772..4257888 1019..1135 100 <- Minus
arm_3L 4258336..4258946 132..742 100 <- Minus
arm_3L 4259013..4259127 17..131 100   Minus

BO05301.pep Sequence

Translation from 16 to 2554

> BO05301.pep
MEKFNKAQAKNLAAAQKLVDTYASSSEDEGELDENHILELLYKNYKPSDN
AGSSKEAARTSTFLENTLHSGAATCLICIGSIRRVEAIWSCESCYCFFHL
KCIQRWANDSMMQMKVKAAEQQNGQGHYNHLGEFVPPKRQKSLHWCCPKC
RRDYQPADKPTQYNCFCGKEVNPENQPFLVPHSCGEHCGKLLQPKCGHDC
KLLCHPGPCPPCAQQAQVSCLCGKSSPRSVRCIDKQWTCQQTCKELLACG
KHKCNQVCHQPGKCPPCTSKSLQPCECQRESKMVNCSDRKWKCQNVCGAP
FACGLHICEKVCHAGPCGDGECPLQVRSCPCGKNTQVRPCNETEETCGDT
CQKLLSCGQHTCTQRCHRGPCISCPIRTKKKCRCGLHEKELPCSKEFACE
TKCKQMRDCGKHACNRKCCGDQCPPCEKICGKQLSCNKHKCQSVCHNGPC
YPCKLESQINCRCGKTKKSVPCGRERSARIVCLELCRITPKCHHAIKHRC
HKGDCPPCGQVCGLPNDTSKCGHICKARCHEAVRVNKPKEARPQAKKYEY
KALPHPRCEEGVIVTCIGGHEVATWPCWNSKPTSCQRSCARQLKCGNHKC
SLVCHFVPLPQDMSAQTGCANCEEGCTVPRPTGCIHACPKGCHPPPCAPC
NFVIKTKCHCGLNQLVYKCNEYYDETGSVQEIIERREKLRSCGNRCLKNY
PCGHRCTAICHTGKCPNPELCRKKVRIFCACKRLKQEIACDKHRAGQTFL
DCDSNCKAEQIRVQAAEQLQLEQKRRDEEERNRLELEKFEAKFGKRKHKE
RKTVGSGPAKTKIDWQRRAIYAVSILTVVGAIVVAFYADSASFLDH

BO05301.pep Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 02:47:40
Subject Length Description Subject Range Query Range Score Percent Strand
CG15011-PA 840 CG15011-PA 1..840 1..840 4855 100 Plus
stc-PC 1095 CG3647-PC 375..902 75..604 875 33.3 Plus
stc-PA 1099 CG3647-PA 379..906 75..604 875 33.3 Plus
stc-PD 1102 CG3647-PD 382..909 75..604 875 33.3 Plus
stc-PB 1106 CG3647-PB 386..913 75..604 875 33.3 Plus
stc-PC 1095 CG3647-PC 369..915 214..682 586 28.6 Plus
stc-PA 1099 CG3647-PA 373..919 214..682 586 28.6 Plus
stc-PD 1102 CG3647-PD 376..922 214..682 586 28.6 Plus
stc-PC 1095 CG3647-PC 434..751 461..731 260 28.1 Plus
stc-PA 1099 CG3647-PA 438..755 461..731 260 28.1 Plus
stc-PD 1102 CG3647-PD 441..758 461..731 260 28.1 Plus
stc-PC 1095 CG3647-PC 453..673 508..740 212 24.1 Plus
stc-PA 1099 CG3647-PA 457..677 508..740 212 24.1 Plus
stc-PD 1102 CG3647-PD 460..680 508..740 212 24.1 Plus
stc-PC 1095 CG3647-PC 452..568 621..756 189 31.4 Plus
stc-PA 1099 CG3647-PA 456..572 621..756 189 31.4 Plus
stc-PD 1102 CG3647-PD 459..575 621..756 189 31.4 Plus