Clone Sequence Records
BO05315.3prime Sequence
886 bp (813 high quality bases) assembled on 2005-12-02
> BO05315.3prime
ATGGTCTAGAAAGCTTGCAACGAATTGACGGCTTTTTAAAAACTCAAGCA
TGCCCTGAACATTGGCATTGACCTGTGGCGGCTGCGTTTGTTGTCCGTTC
AGCAAACTATTGGGCATCCCCATAGGAAGCATTTGCTGTGCCTGGTTGTT
GAAACCACCACTCTGGGAATTTTGCTGTTGAGCCAAATGCTGCAAAAATA
AATCCTGTTGCTGCTGAGGATGTGGGGGAATTTGGTTTTGTGGAAAAGAA
GAATACTGTCTAAACGAAAGTATAGCCGGATCCATTGAAGTCCAATCACT
GTTGTTGTAAACCTTGTTGTGAGCCATTGGATGCTGCAATTGCGAATCAC
CCACGGGCTGTCCCGGGTTCTGGTGCATGCCCATCGGCGCATTCCAGTTG
ACACCCATTGGCATTTGGTGCTGTCCCTGGGCACCGCTGTTGCCCACCCC
ATTGACGGGCATGTTCATGAAGGGTATTATTTTGCTGGTGAGCTGCAGTC
TGGATGCACCGCCCAAGCCCAATGTGTTGACGTGATTGAAGCCTGGCGGC
GGCATGCGAGCTCGCTGCAGGTTGTCCACCAATTGCGGATGGGGTGGAAC
TTGAGGCTGTGGCGGCAACTTCGGCAAGGGGTTCTCATTATTAATACTCT
GTTTTTGGACCACCTCATTTTCCATAAGTTCAGCAAGTCCCTTTTGGGTC
TCAACGAACGGGTCGAATCCTAAGTCATCGTCGACTATCGAGTTCTGTGT
AAACCGATTCTGCTGAGATTGCGTGTTTGGAGGCATAAATTCATACATTC
CCATCATTCTCTGCTTTTGTTGCTGTTGCTGCTGCTGCTGCTGCTGCTGC
GAGTTAATAAGTCCATTTTCGACAAAAGGCGAATTC
BO05315.3prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 12:19:58
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG31716-PC | 3156 | CG31716-RC | 2286..3153 | 886..19 | 4340 | 100 | Minus |
| CG31716-PD | 3156 | CG31716-RD | 2286..3153 | 886..19 | 4340 | 100 | Minus |
| CG31716-PE | 3156 | CG31716-RE | 2286..3153 | 886..19 | 4340 | 100 | Minus |
| CG31716-PB | 3156 | CG31716-RB | 2286..3153 | 886..19 | 4340 | 100 | Minus |
| CG31716-PG | 3144 | CG31716-RG | 2274..3141 | 886..19 | 4340 | 100 | Minus |
| CG31716-PA | 3156 | CG31716-RA | 2286..3153 | 886..19 | 4340 | 100 | Minus |
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-11 02:37:58
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Cnot4-RL | 3612 | CG31716-RL | 2630..3497 | 886..19 | 4340 | 100 | Minus |
| Cnot4-RK | 3972 | CG31716-RK | 2666..3533 | 886..19 | 4340 | 100 | Minus |
| Cnot4-RJ | 3826 | CG31716-RJ | 2844..3711 | 886..19 | 4340 | 100 | Minus |
Blast to na_all.dmel.RELEASE6 performed 2015-02-11 02:37:54
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2L | 23513712 | 2L | 10401924..10402333 | 721..312 | 2050 | 100 | Minus |
| 2L | 23513712 | 2L | 10402406..10402564 | 312..154 | 795 | 100 | Minus |
| 2L | 23513712 | 2L | 10402630..10402767 | 156..19 | 690 | 100 | Minus |
| 2L | 23513712 | 2L | 10401661..10401741 | 864..784 | 405 | 100 | Minus |
| 2L | 23513712 | 2L | 10401803..10401868 | 784..719 | 330 | 100 | Minus |
Blast to na_te.dros performed on 2015-02-11 02:37:56 has no hits.
BO05315.3prime Sim4 Records
Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 02:20:24 Download gff for
BO05315.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG31716-PE | 2286..3156 | 18..886 | 99 | | Minus |
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 00:41:23 Download gff for
BO05315.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG31716-PA | 2286..3156 | 18..886 | 99 | | Minus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-22 20:49:35 Download gff for
BO05315.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Cnot4-RJ | 2844..3716 | 12..886 | 99 | | Minus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-11 05:41:37 Download gff for
BO05315.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Cnot4-RJ | 2844..3716 | 12..886 | 99 | | Minus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-11 05:41:37 Download gff for
BO05315.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2L | 10401572..10401594 | 864..886 | 100 | -> | Minus |
| 2L | 10401662..10401741 | 784..863 | 100 | -> | Minus |
| 2L | 10401804..10401867 | 720..783 | 100 | -> | Minus |
| 2L | 10401926..10402333 | 312..719 | 100 | -> | Minus |
| 2L | 10402407..10402562 | 156..311 | 100 | -> | Minus |
| 2L | 10402631..10402772 | 12..155 | 97 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-22 20:49:35 Download gff for
BO05315.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2L | 10402631..10402772 | 12..155 | 97 | | Minus |
| arm_2L | 10401572..10401594 | 864..886 | 100 | -> | Minus |
| arm_2L | 10401662..10401741 | 784..863 | 100 | -> | Minus |
| arm_2L | 10401804..10401867 | 720..783 | 100 | -> | Minus |
| arm_2L | 10401926..10402333 | 312..719 | 100 | -> | Minus |
| arm_2L | 10402407..10402562 | 156..311 | 100 | -> | Minus |
BO05315.5prime Sequence
972 bp (840 high quality bases) assembled on 2005-12-02
> BO05315.5prime
GAAGTTATCAGTCGACATGAACGGCCTGAGCAGCAATGATGATGCAGTCG
AGTGCCCTTTGTGTATGGAGCCGCTTGAGGTGGACGATCTGACCTTCTTT
CCGTGTACCTGCGGATATCAGATTTGCCGATTCTGTTGGCATAGGATCCG
CACGGATGAGAACAAGCTGTGTCCGGCATGCCGAAAGGAGTATCCCGAGA
ATCCAGCTGACTTCAAGCCGCTGTCGCAGGAGGAAATGATTGCCTTCAAG
TCCCAGAAACGCCAAAGGGACCAACAACGAAAACAAAAGATCACCGAGAA
CCGCAAACACTTGGCCAACGTTCGCGTTGTCCAAAAGAACTTGGTGTTCG
TTGTGGGGCTACCGCCACGACTTGCTGATGCAGACATATTAAAGAAACAC
GAGTATTTCGGTAAATATGGGAAAATTCATAAAGTCGTTATAAATCCAAG
TACCACGTATGCCGGGGTCCAGGGTCCATCTGCTTCTGCGTATGTCACAT
ATGTTAATAACTCGGATGCCTTGCGGGCCATTCAAAGCGTCAATAATATT
ATGATAGACGGTCGGCTTATAAAGACCAGCTTGGGGACAACCAAATACTG
TAGCCACTTCATGAAGAACCAGCAGTGTCCCAAGGGCGACTGCATGTACT
TACATGAATTGGGCGATCCCGAGGCCAGTTTCACAAAGGAGGAAATGCAT
CAGGGAAAGCACCTGGAGTACGAGAAGCGCCTGCACGATACTCTAATTGC
GTCATTGGGACCGAATGCAACAGGTATTGTAAATGTCGCGATTCCATCGT
CATCGTCAGCGTCATCCTCGTCCTCTGGATCGGGTACAAATGGGTCAAGT
GCATCAGGTAATGCCCAGCAAAAGGAGGCCTGGCCAAGCTTATCGGTCTC
GCCCATCAATGGCAAAGAGGCGGCTGCCACTGCGACCAGTTCCAGTGGGA
AAAGTAAACGGGAAAAGCTGCG
BO05315.5prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 12:19:59
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG31716-PC | 3156 | CG31716-RC | 1..956 | 17..972 | 4755 | 99.8 | Plus |
| CG31716-PD | 3156 | CG31716-RD | 1..956 | 17..972 | 4755 | 99.8 | Plus |
| CG31716-PE | 3156 | CG31716-RE | 1..956 | 17..972 | 4755 | 99.8 | Plus |
| CG31716-PB | 3156 | CG31716-RB | 1..956 | 17..972 | 4755 | 99.8 | Plus |
| CG31716-PA | 3156 | CG31716-RA | 1..956 | 17..972 | 4755 | 99.8 | Plus |
| CG31716-PG | 3144 | CG31716-RG | 1..757 | 17..773 | 3785 | 100 | Plus |
| CG31716-PG | 3144 | CG31716-RG | 757..944 | 785..972 | 915 | 99.4 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-12 10:16:13
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Cnot4-RA | 3615 | CG31716-RA | 348..1303 | 17..972 | 4765 | 99.9 | Plus |
| Cnot4-RB | 3644 | CG31716-RB | 377..1332 | 17..972 | 4765 | 99.9 | Plus |
| Cnot4-RE | 3554 | CG31716-RE | 287..1242 | 17..972 | 4765 | 99.9 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2015-02-12 10:16:11
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2L | 23513712 | 2L | 10399315..10399536 | 471..692 | 1110 | 100 | Plus |
| 2L | 23513712 | 2L | 10399767..10399954 | 785..972 | 925 | 99.5 | Plus |
| 2L | 23513712 | 2L | 10398444..10398597 | 236..389 | 755 | 99.4 | Plus |
| 2L | 23513712 | 2L | 10398276..10398392 | 119..235 | 585 | 100 | Plus |
| 2L | 23513712 | 2L | 10398115..10398219 | 17..121 | 525 | 100 | Plus |
| 2L | 23513712 | 2L | 10399593..10399688 | 690..785 | 480 | 100 | Plus |
| 2L | 23513712 | 2L | 10398654..10398741 | 386..473 | 440 | 100 | Plus |
Blast to na_te.dros performed on 2015-02-12 10:16:12 has no hits.
BO05315.5prime Sim4 Records
Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 02:20:25 Download gff for
BO05315.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG31716-PC | 1..956 | 17..972 | 99 | | Plus |
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 00:41:24 Download gff for
BO05315.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG31716-PD | 1..956 | 17..972 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-29 20:55:16 Download gff for
BO05315.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Cnot4-RE | 287..1242 | 17..972 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-12 13:00:28 Download gff for
BO05315.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Cnot4-RE | 287..1242 | 17..972 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-12 13:00:28 Download gff for
BO05315.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2L | 10398115..10398219 | 17..121 | 100 | -> | Plus |
| 2L | 10398279..10398392 | 122..235 | 100 | -> | Plus |
| 2L | 10398444..10398593 | 236..385 | 100 | -> | Plus |
| 2L | 10398654..10398740 | 386..472 | 100 | -> | Plus |
| 2L | 10399317..10399535 | 473..691 | 100 | -> | Plus |
| 2L | 10399595..10399688 | 692..785 | 100 | -> | Plus |
| 2L | 10399768..10399954 | 786..972 | 99 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-29 20:55:16 Download gff for
BO05315.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2L | 10399595..10399688 | 692..785 | 100 | -> | Plus |
| arm_2L | 10399768..10399954 | 786..972 | 99 | | Plus |
| arm_2L | 10398115..10398219 | 17..121 | 100 | -> | Plus |
| arm_2L | 10398279..10398392 | 122..235 | 100 | -> | Plus |
| arm_2L | 10398444..10398593 | 236..385 | 100 | -> | Plus |
| arm_2L | 10398654..10398740 | 386..472 | 100 | -> | Plus |
| arm_2L | 10399317..10399535 | 473..691 | 100 | -> | Plus |
BO05315.complete Sequence
3187 bp assembled on 2008-08-14
GenBank Submission: FJ630010
> BO05315.complete
GAAGTTATCAGTCGACATGAACGGCCTGAGCAGCAATGATGATGCAGTCG
AGTGCCCTTTGTGTATGGAGCCGCTTGAGGTGGACGATCTGACCTTCTTT
CCGTGTACCTGCGGATATCAGATTTGCCGATTCTGTTGGCATAGGATCCG
CACGGATGAGAACAAGCTGTGTCCGGCATGCCGAAAGGAGTATCCCGAGA
ATCCAGCTGACTTCAAGCCGCTGTCGCAGGAGGAAATGATTGCCTTCAAG
TCCCAGAAACGCCAAAGGGACCAACAACGAAAACAAAAGATCACCGAGAA
CCGCAAACACTTGGCCAACGTTCGCGTTGTCCAAAAGAACTTGGTGTTCG
TTGTGGGGCTACCGCCACGACTTGCTGATGCAGACATATTAAAGAAACAC
GAGTATTTCGGTAAATATGGGAAAATTCATAAAGTCGTTATAAATCCAAG
TACCACGTATGCCGGGGTCCAGGGTCCATCTGCTTCTGCGTATGTCACAT
ATGTTAATAACTCGGATGCCTTGCGGGCCATTCAAAGCGTCAATAATATT
ATGATAGACGGTCGGCTTATAAAGACCAGCTTGGGGACAACCAAATACTG
TAGCCACTTCATGAAGAACCAGCAGTGTCCCAAGGGCGACTGCATGTACT
TACATGAATTGGGCGATCCCGAGGCCAGTTTCACAAAGGAGGAAATGCAT
CAGGGAAAGCACCTGGAGTACGAGAAGCGCCTGCACGATACTCTAATTGC
GTCATTGGGACCGAATGCAACAGGTATTGTAAATGTCGCGATTCCATCGT
CATCGTCAGCGTCATCCTCGTCCTCTGGATCGGGTACAAATGGTTCAAGT
GCATCAGGTAATGCCCAGCAAAAGGAGGCCTGGCCAAGCTTATCGGTCTC
GCCCATCAATGGCAAAGAGGCGGCTGCCACTGCGACCAGTTCCAGTGGGA
AAAGTAAACGGGAAAAGCTGCGCAACGAGAAGAGGCACGAGAAGAACAAG
GCGAAGAATAAGAACGGCAGCAATACAAACGCCAATGCCTCGAACAAGGA
GAACTATGTTCCCGAAACGAGAAGCAGCACAAGTACTGAGACATTCGCAG
AGGCTACGGCGGATGCACCGGCTTCCACCAAGGCAGAACCGCCGCAAGCC
TCTAGCAATAGAACGAGGGCGGATCGTGGAAAAGATCGGACCACGGCTAG
TGCAAAGGAGCAGAAGAAGAGCAAGGAAGCTGCTCCAGCACCTGCAGCAA
GTAAACCGGCGGAGCGGGTTGAAACAAGCGAGAGTACAATAAGACAAAAG
AAGGCGGAAGTAACAGAAAGCTGTGAAGATAACTTACCACAAAAGAGATT
AGCGGGAACAAACGTTCAAAGATCTGTGAGCTCTTGTAGCGAAAATAGCG
AAGGACACGTCTCTGAGAGTAGCTTAAGTGAGAAGAGTTTAACTGGTGAT
TATGTGGAGGAAAAGTGCAATAGTGTGAATTCGGAAAGCCAGCAAGAAAG
TGTAAAGTTTCAGGAGGAGCTCGAAAAGAGCAACGAGGCAATTGTCGAGG
CCGAAACGATTCTGCCAACAGCTGAGTCCTCTGAGGACATCAGTCCCGCT
GCAGTTGCGCCAGGCAATGGAGAAGTCGAAGGATGCTTACCCGTTGTTGA
TCCAGTCGAACCACCGAGTCTGGCGGATAATGGAAGCAGAGTAACAGATG
CGCTATCTAAGCTGAACATTTTCGATGACACGCCTAGCTTTTTCACATCG
CCATCATTCCAGCAAGCACCCATATTAAAGAATAAGCTAGATTTGGAAAT
GCGACAGTCTCATTTACCTGACTTGGTCAACGACATTGATGGAATCCAAA
AGGCATCCAATACAAACGAGTGGGAGGAAGCCTTCAAAAATGTGATGATG
GGCAACACGCAGCACATGGAGGAGCAACTGTTGCAGCAGCAACATTTGCA
GCAGCATCAGAATTTGCGCCACCAGCTGGTGTTGCAACAGGAGGAGTTCC
TTCGCATGCAAGAATTACAGAAACGCAACAACTTTGCGACGCAAATCAAC
GGTCCTGCGAATGATTTCCTTAGAGCTTATGAGCTCAGAGCTCAAGCCAA
TGCAATCATTCAGCAACAATTATTACAACAGCACGCAGGCGAAAATCTAT
TTGGCGGCAACATGTCGAAGTTCTTCGATTTCCATAAAAGTCAGCCGCAG
TCACACCATCAGTATCTAAATGGACATCCGCCTCAAATCAATGGGAACGG
TGCTGTGCCGGAGCCGCAAAGAGTGGCGGCCTCTTTGGAAAGCAATCGAC
TGAATTCGCCTTTTGTCGAAAATGGACTTATTAACTCGCAGCAGCAGCAG
CAGCAGCAGCAACAGCAACAAAAGCAGAGAATGATGGGAATGTATGAATT
TATGCCTCCAAACACGCAATCTCAGCAGAATCGGTTTACACAGAACTCGA
TAGTCGACGATGACTTAGGATTCGACCCGTTCGTTGAGACCCAAAAGGGA
CTTGCTGAACTTATGGAAAATGAGGTGGTCCAAAAACAGAGTATTAATAA
TGAGAACCCCTTGCCGAAGTTGCCGCCACAGCCTCAAGTTCCACCCCATC
CGCAATTGGTGGACAACCTGCAGCGAGCTCGCATGCCGCCGCCAGGCTTC
AATCACGTCAACACATTGGGCTTGGGCGGTGCATCCAGACTGCAGCTCAC
CAGCAAAATAATACCCTTCATGAACATGCCCGTCAATGGGGTGGGCAACA
GCGGTGCCCAGGGACAGCACCAAATGCCAATGGGTGTCAACTGGAATGCG
CCGATGGGCATGCACCAGAACCCGGGACAGCCCGTGGGTGATTCGCAATT
GCAGCATCCAATGGCTCACAACAAGGTTTACAACAACAGTGATTGGACTT
CAATGGATCCGGCTATACTTTCGTTTAGACAGTATTCTTCTTTTCCACAA
AACCAAATTCCCCCACATCCTCAGCAGCAACAGGATTTATTTTTGCAGCA
TTTGGCTCAACAGCAAAATTCCCAGAGTGGTGGTTTCAACAACCAGGCAC
AGCAAATGCTTCCTATGGGGATGCCCAATAGTTTGCTGAACGGACAACAA
ACGCAGCCGCCACAGGTCAATGCCAATGTTCAGGGCATGCTTGAGTTTTT
AAAAAGCCGTCAATTCGTTGCAAGCTTTCTAGACCAT
BO05315.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-27 23:37:20
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Cnot4-RA | 3156 | CG31716-PA | 1..3153 | 17..3169 | 15765 | 100 | Plus |
| Cnot4-RB | 3156 | CG31716-PB | 1..3153 | 17..3169 | 15765 | 100 | Plus |
| Cnot4-RE | 3156 | CG31716-PE | 1..3153 | 17..3169 | 15765 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 23:37:21
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Cnot4-RA | 3615 | CG31716-RA | 348..3500 | 17..3169 | 15765 | 100 | Plus |
| Cnot4-RB | 3644 | CG31716-RB | 377..3529 | 17..3169 | 15765 | 100 | Plus |
| Cnot4-RE | 3554 | CG31716-RE | 287..3439 | 17..3169 | 15765 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 23:37:16
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2L | 23513712 | 2L | 10399767..10400679 | 785..1697 | 4565 | 100 | Plus |
| 2L | 23513712 | 2L | 10401924..10402333 | 2467..2876 | 2050 | 100 | Plus |
| 2L | 23513712 | 2L | 10401333..10401595 | 2063..2325 | 1315 | 100 | Plus |
| 2L | 23513712 | 2L | 10399315..10399536 | 471..692 | 1110 | 100 | Plus |
| 2L | 23513712 | 2L | 10401076..10401271 | 1868..2063 | 980 | 100 | Plus |
| 2L | 23513712 | 2L | 10402406..10402564 | 2876..3034 | 795 | 100 | Plus |
| 2L | 23513712 | 2L | 10398444..10398597 | 236..389 | 755 | 99.4 | Plus |
| 2L | 23513712 | 2L | 10400732..10400869 | 1695..1832 | 690 | 100 | Plus |
| 2L | 23513712 | 2L | 10402630..10402767 | 3032..3169 | 690 | 100 | Plus |
| 2L | 23513712 | 2L | 10398276..10398392 | 119..235 | 585 | 100 | Plus |
| 2L | 23513712 | 2L | 10398115..10398219 | 17..121 | 525 | 100 | Plus |
| 2L | 23513712 | 2L | 10399593..10399688 | 690..785 | 480 | 100 | Plus |
| 2L | 23513712 | 2L | 10398654..10398741 | 386..473 | 440 | 100 | Plus |
| 2L | 23513712 | 2L | 10401661..10401741 | 2324..2404 | 405 | 100 | Plus |
| 2L | 23513712 | 2L | 10401803..10401868 | 2404..2469 | 330 | 100 | Plus |
Blast to na_te.dros performed 2014-11-27 23:37:19
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 6805..6891 | 1902..1992 | 157 | 67 | Plus |
| Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 6727..6819 | 1902..1995 | 152 | 63.8 | Plus |
| Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 6769..6903 | 1902..2033 | 145 | 59.6 | Plus |
| Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 6713..6784 | 1925..1996 | 135 | 65.3 | Plus |
| Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 6748..6835 | 1902..1996 | 134 | 65.3 | Plus |
| Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 6723..6829 | 1920..2031 | 133 | 62.8 | Plus |
| Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 2327..2419 | 1902..1995 | 125 | 60.6 | Plus |
| Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 6823..6913 | 1902..1996 | 123 | 62.1 | Plus |
| Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 2626..2669 | 1923..1966 | 121 | 75 | Plus |
BO05315.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-11 07:39:00 Download gff for
BO05315.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG31716-RE | 292..3449 | 17..3176 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 19:33:39 Download gff for
BO05315.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Cnot4-RE | 287..3439 | 17..3171 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-09-04 11:06:15 Download gff for
BO05315.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG31716-RE | 292..3444 | 17..3171 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 01:04:44 Download gff for
BO05315.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Cnot4-RE | 287..3439 | 17..3171 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 01:04:44 Download gff for
BO05315.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2L | 10401334..10401594 | 2064..2324 | 100 | -> | Plus |
| 2L | 10401662..10401741 | 2325..2404 | 100 | -> | Plus |
| 2L | 10401804..10401867 | 2405..2468 | 100 | -> | Plus |
| 2L | 10402407..10402562 | 2877..3032 | 100 | -> | Plus |
| 2L | 10402631..10402767 | 3033..3171 | 98 | | Plus |
| 2L | 10401926..10402333 | 2469..2876 | 100 | -> | Plus |
| 2L | 10398115..10398219 | 17..121 | 100 | -> | Plus |
| 2L | 10398279..10398392 | 122..235 | 100 | -> | Plus |
| 2L | 10398444..10398593 | 236..385 | 100 | -> | Plus |
| 2L | 10398654..10398740 | 386..472 | 100 | -> | Plus |
| 2L | 10399317..10399535 | 473..691 | 100 | -> | Plus |
| 2L | 10399595..10399688 | 692..785 | 100 | -> | Plus |
| 2L | 10399768..10400679 | 786..1697 | 100 | -> | Plus |
| 2L | 10400735..10400869 | 1698..1832 | 100 | -> | Plus |
| 2L | 10400963..10400998 | 1833..1868 | 100 | -> | Plus |
| 2L | 10401077..10401271 | 1869..2063 | 100 | -> | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 19:33:39 Download gff for
BO05315.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2L | 10398115..10398219 | 17..121 | 100 | -> | Plus |
| arm_2L | 10398279..10398392 | 122..235 | 100 | -> | Plus |
| arm_2L | 10398444..10398593 | 236..385 | 100 | -> | Plus |
| arm_2L | 10398654..10398740 | 386..472 | 100 | -> | Plus |
| arm_2L | 10399317..10399535 | 473..691 | 100 | -> | Plus |
| arm_2L | 10399595..10399688 | 692..785 | 100 | -> | Plus |
| arm_2L | 10399768..10400679 | 786..1697 | 100 | -> | Plus |
| arm_2L | 10400735..10400869 | 1698..1832 | 100 | -> | Plus |
| arm_2L | 10400963..10400998 | 1833..1868 | 100 | -> | Plus |
| arm_2L | 10401077..10401271 | 1869..2063 | 100 | -> | Plus |
| arm_2L | 10401334..10401594 | 2064..2324 | 100 | -> | Plus |
| arm_2L | 10401662..10401741 | 2325..2404 | 100 | -> | Plus |
| arm_2L | 10401804..10401867 | 2405..2468 | 100 | -> | Plus |
| arm_2L | 10401926..10402333 | 2469..2876 | 100 | -> | Plus |
| arm_2L | 10402407..10402562 | 2877..3032 | 100 | -> | Plus |
| arm_2L | 10402631..10402767 | 3033..3171 | 98 | | Plus |
BO05315.pep Sequence
Translation from 16 to 3187
> BO05315.pep
MNGLSSNDDAVECPLCMEPLEVDDLTFFPCTCGYQICRFCWHRIRTDENK
LCPACRKEYPENPADFKPLSQEEMIAFKSQKRQRDQQRKQKITENRKHLA
NVRVVQKNLVFVVGLPPRLADADILKKHEYFGKYGKIHKVVINPSTTYAG
VQGPSASAYVTYVNNSDALRAIQSVNNIMIDGRLIKTSLGTTKYCSHFMK
NQQCPKGDCMYLHELGDPEASFTKEEMHQGKHLEYEKRLHDTLIASLGPN
ATGIVNVAIPSSSSASSSSSGSGTNGSSASGNAQQKEAWPSLSVSPINGK
EAAATATSSSGKSKREKLRNEKRHEKNKAKNKNGSNTNANASNKENYVPE
TRSSTSTETFAEATADAPASTKAEPPQASSNRTRADRGKDRTTASAKEQK
KSKEAAPAPAASKPAERVETSESTIRQKKAEVTESCEDNLPQKRLAGTNV
QRSVSSCSENSEGHVSESSLSEKSLTGDYVEEKCNSVNSESQQESVKFQE
ELEKSNEAIVEAETILPTAESSEDISPAAVAPGNGEVEGCLPVVDPVEPP
SLADNGSRVTDALSKLNIFDDTPSFFTSPSFQQAPILKNKLDLEMRQSHL
PDLVNDIDGIQKASNTNEWEEAFKNVMMGNTQHMEEQLLQQQHLQQHQNL
RHQLVLQQEEFLRMQELQKRNNFATQINGPANDFLRAYELRAQANAIIQQ
QLLQQHAGENLFGGNMSKFFDFHKSQPQSHHQYLNGHPPQINGNGAVPEP
QRVAASLESNRLNSPFVENGLINSQQQQQQQQQQQKQRMMGMYEFMPPNT
QSQQNRFTQNSIVDDDLGFDPFVETQKGLAELMENEVVQKQSINNENPLP
KLPPQPQVPPHPQLVDNLQRARMPPPGFNHVNTLGLGGASRLQLTSKIIP
FMNMPVNGVGNSGAQGQHQMPMGVNWNAPMGMHQNPGQPVGDSQLQHPMA
HNKVYNNSDWTSMDPAILSFRQYSSFPQNQIPPHPQQQQDLFLQHLAQQQ
NSQSGGFNNQAQQMLPMGMPNSLLNGQQTQPPQVNANVQGMLEFLKSRQF
VASFLDH
BO05315.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 15:13:44
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Cnot4-PA | 1051 | CG31716-PA | 1..1051 | 1..1051 | 5497 | 100 | Plus |
| Cnot4-PB | 1051 | CG31716-PB | 1..1051 | 1..1051 | 5497 | 100 | Plus |
| Cnot4-PE | 1051 | CG31716-PE | 1..1051 | 1..1051 | 5497 | 100 | Plus |
| Cnot4-PD | 1051 | CG31716-PD | 1..1051 | 1..1051 | 5497 | 100 | Plus |
| Cnot4-PC | 1051 | CG31716-PC | 1..1051 | 1..1051 | 5497 | 100 | Plus |
