Clone BO05316 Report

Search the DGRC for BO05316

Clone and Library Details

Library:BO
Tissue Source:D. melanogaster
Created by:Joe Carlson
Date Registered:2004-06-03
Comments:Infusion clones with open reading frames
Original Plate Number:53
Well:16
Vector:pDNR-Dual
Associated Gene/TranscriptStat92E-RF
Protein status:BO05316.pep: Imported from assembly
Sequenced Size:2317

Clone Sequence Records

BO05316.complete Sequence

2317 bp assembled on 2009-10-20

GenBank Submission: KX799401

> BO05316.complete
GAAGTTATCAGTCGACATGAGCTTGTGGAAGCGCATCTCCAGCCATGTCG
ACTGCGAGCAGCGTATGGCGGCTTACTACGAGGAGAAGGGTATGCTCGAG
CTGCGCCTCTGCTTGGCACCCTGGATCGAAGACAGGATAATGTCCGAACA
AATAACGCCCAACACTACCGATCAGTTAGAGCGCGTGGCCCTAAAGTTCA
ACGAAGATCTGCAGCAAAAGCTTCTATCCACGCGCACCGCCAGCGACCAG
GCCCTCAAGTTCCGGGTGGTGGAGCTTTGCGCCCTCATCCAACGCATCTC
CGCCGTTGAGCTGTACACGCATCTGCGCAGCGGTCTACAAAAAGAGTTGC
AGTTGGTCACCGAGAAGAGCGTGGCTGCAACCGCAGGCCAATCAATGCCG
CTAAATCCCTACAACATGAACAACACGCCCATGGTTACCGGGTACATGGT
GGACCCCAGTGATCTTCTGGCGGTGTCCAACAGCTGCAATCCTCCAGTTG
TTCAGGGCATAGGACCTATCCACAATGTGCAAAATACAGGCATTGCCTCC
CCAGCCCTCGGTATGGTCACACCCAAGGTGGAGCTGTACGAGGTGCAACA
TCAGATCATGCAGTCCCTCAATGAGTTTGGCAACTGTGCCAATGCCTTGA
AGCTGCTTGCCCAAAACTACAGTTACATGCTAAACTCCACATCCTCGCCG
AACGCAGAAGCTGCCTACAGAAGTCTTATCGATGAAAAGGCGGCCATCGT
ACTCACAATGCGTCGCAGCTTTATGTACTACGAATCGCTGCACGAGATGG
TCATACACGAGCTCAAGAACTGGCGCCACCAACAAGCGCAAGCCGGAAAC
GGAGCTCCCTTTAATGAGGGCTCCCTGGATGATATCCAGCGCTGCTTTGA
GATGCTCGAGAGCTTTATCGCACACATGCTGGCTGCCGTTAAGGAGCTGA
TGCGCGTACGTCTGGTCACCGAAGAGCCGGAGCTCACACATCTGCTTGAA
CAGGTGCAGAACGCGCAGAAGAACCTGGTATGCTCTGCCTTTATCGTCGA
CAAACAGCCCCCGCAAGTGATGAAGACCAACACACGCTTCGCAGCGTCTG
TGCGTTGGCTAATCGGTTCTCAGCTGGGCATTCACAACAATCCACCCACA
GTCGAGTGCATCATAATGTCAGAGATCCAGTCGCAACGGTTCGTTACGCG
CAATACACAGATGGATAATAGTAGCCTATCCGGTCAATCATCGGGCGAGA
TTCAAAACGCCTCTAGCACTATGGAGTATCAGCAAAACAACCATGTTTTC
TCCGCCAGCTTCCGAAACATGCAGCTGAAGAAGATCAAGCGGGCAGAAAA
GAAGGGCACTGAGAGCGTGATGGACGAGAAGTTCGCCCTGTTCTTCTACA
CCACCACCACCGTGAACGATTTCCAGATCCGTGTGTGGACCCTGTCCTTA
CCGGTGGTGGTTATTGTGCACGGCAACCAGGAGCCCCAGTCTTGGGCTAC
CATTACTTGGGACAATGCATTTGCGGAGATTGTTCGCGATCCCTTCATGA
TTACCGACCGCGTTACCTGGGCCCAGCTGTCAGTCGCGTTGAACATCAAA
TTCGGATCGTGCACAGGGCGTTCTCTGACCATTGATAACCTTGATTTCCT
ATACGAGAAACTCCAGCGTGAGGAGCGGTCTGAGTACATTACGTGGAACC
AATTCTGTAAGGAGCCCATGCCCGATCGGTCCTTTACATTCTGGGAGTGG
TTCTTTGCCATCATGAAACTCACCAAAGATCACATGTTGGGCATGTGGAA
AGCAGGCTGCATTATGGGCTTCATCAACAAGACCAAGGCTCAGACTGATC
TGCTGCGTTCAGTCTATGGTATCGGCACTTTCCTGCTCCGTTTCTCCGAC
AGCGAGCTCGGTGGAGTCACTATCGCCTACGTAAACGAAAATGGACTGGT
CACCATGCTAGCGCCATGGACTGCACGGGATTTCCAGGTGCTGAACCTGG
CCGATCGCATTCGAGATCTGGACGTGCTTTGCTGGCTGCACCCTAGCGAC
CGCAATGCGAGTCCCGTGAAGAGGGACGTCGCCTTCGGTGAGTTCTACTC
AAAGCGTCAAGAGCCCGAACCCCTCGTTCTAGATCCTGTGACCGGTTATG
TGAAGAGCACATTGCATGTTCACGTTTGTAGAAACGGAGAGAATGGATCT
ACTAGTGGAACACCGCATCATGCTCAGGAAAGCATGCAACTGGGAAATGG
TGACTTTGGAATGGCGGACTTCGATACGATTACAAACTTTGAGAACTTTG
CAAGCTTTCTAGACCAT

BO05316.complete Blast Records

Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-27 08:42:14
Subject Length Description Subject Range Query Range Score Percent Strand
Stat92E-RM 2286 CG4257-PM 1..2283 17..2299 11415 100 Plus
Stat92E-RF 2286 CG4257-PF 1..2283 17..2299 11415 100 Plus
Stat92E-RK 2457 CG4257-PK 1..2232 17..2248 11160 100 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 08:42:16
Subject Length Description Subject Range Query Range Score Percent Strand
Stat92E-RM 4029 CG4257-RM 675..2958 16..2299 11420 100 Plus
Stat92E-RF 3873 CG4257-RF 519..2802 16..2299 11420 100 Plus
Stat92E-RK 4200 CG4257-RK 675..2907 16..2248 11165 100 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 08:42:11
Subject Length Description Subject Range Query Range Score Percent Strand
3R 32079331 3R 20540523..20541553 1172..142 5155 100 Minus
3R 32079331 3R 20539975..20540457 1652..1170 2415 100 Minus
3R 32079331 3R 20539657..20539916 1912..1653 1300 100 Minus
3R 32079331 3R 20539400..20539601 2111..1910 1010 100 Minus
3R 32079331 3R 20539221..20539358 2247..2110 690 100 Minus
3R 32079331 3R 20541678..20541805 143..16 640 100 Minus
3R 32079331 3R 20537412..20537463 2299..2248 260 100 Minus
Blast to na_te.dros performed on 2014-11-27 08:42:12 has no hits.

BO05316.complete Sim4 Records

Sim4 to dmel-all-transcript-r5.12.fasta performed 2009-10-20 10:49:47 Download gff for BO05316.complete
Subject Subject Range Query Range Percent Splice Strand
Stat92E-RF 521..2803 17..2301 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 08:12:56 Download gff for BO05316.complete
Subject Subject Range Query Range Percent Splice Strand
Stat92E-RF 520..2802 17..2301 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 09:24:58 Download gff for BO05316.complete
Subject Subject Range Query Range Percent Splice Strand
Stat92E-RF 520..2802 17..2301 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 09:24:58 Download gff for BO05316.complete
Subject Subject Range Query Range Percent Splice Strand
3R 20537409..20537463 2248..2301 96 <- Minus
3R 20539221..20539356 2112..2247 100 <- Minus
3R 20539400..20539600 1911..2111 100 <- Minus
3R 20539659..20539916 1653..1910 100 <- Minus
3R 20539975..20540454 1173..1652 100 <- Minus
3R 20540523..20541553 142..1172 100 <- Minus
3R 20541680..20541804 17..141 100   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 08:12:56 Download gff for BO05316.complete
Subject Subject Range Query Range Percent Splice Strand
arm_3R 16363131..16363185 2248..2301 96 <- Minus
arm_3R 16364943..16365078 2112..2247 100 <- Minus
arm_3R 16365122..16365322 1911..2111 100 <- Minus
arm_3R 16365381..16365638 1653..1910 100 <- Minus
arm_3R 16365697..16366176 1173..1652 100 <- Minus
arm_3R 16366245..16367275 142..1172 100 <- Minus
arm_3R 16367402..16367526 17..141 100   Minus

BO05316.3prime Sequence

853 bp (793 high quality bases) assembled on 2005-12-02

> BO05316.3prime
ATGGTCTAGAAAGCTTGCAAAGTTCTCAAAGTTTGTAATCGTATCGAAGT
CCGCCATTCCAAAGTCACCATTTCCCAGTTGCATGCTTTCCTGAGCATGA
TGCGGTGTTCCACTAGTAGATCCATTCTCTCCGTTTCTACAAACGTGAAC
ATGCAATGTGCTCTTCACATAACCGGTCACAGGATCTAGAACGAGGGGTT
CGGGCTCTTGACGCTTTGAGTAGAACTCACCGAAGGCGACGTCCCTCTTC
ACGGGACTCGCATTGCGGTCGCTAGGGTGCAGCCAGCAAAGCACGTCCAG
ATCTCGAATGCGATCGGCCAGGTTCAGCACCTGGAAATCCCGTGCAGTCC
ATGGCGCTAGCATGGTGACCAGTCCATTTTCGTTTACGTAGGCGATAGTG
ACTCCACCGAGCTCGCTGTCGGAGAAACGGAGCAGGAAAGTGCCGATACC
ATAGACTGAACGCAGCAGATCAGTCTGAGCCTTGGTCTTGTTGATGAAGC
CCATAATGCAGCCTGCTTTCCACATGCCCAACATGTGATCTTTGGTGAGT
TTCATGATGGCAAAGAACCACTCCCAGAATGTAAAGGACCGATCGGGCAT
GGGCTCCTTACAGAATTGGTTCCACGTAATGTACTCAGACCGCTCCTCAC
GCTGGAGTTTCTCGTATAGGAAATCAAGGTTATCAATGGTCAGAGAACGC
CCTGTGCACGATCCGAATTTGATGTTCAACGCGACTGACAGCTGGGCCCA
GGTAACGCGGTCGGTAATCATGAAGGGATCGCGAACAATCTCCGCAAATG
CATTGTCCCAAGTAATGGTAGCCCAAGACTGGGGCTCCTGGTTGCCGTGC
ACA

BO05316.3prime Blast Records

Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 12:20:00
Subject Length Description Subject Range Query Range Score Percent Strand
CG4257-PF 2286 Stat92E-RF 1449..2283 853..19 4175 100 Minus
CG4257-PG 1908 Stat92E-RG 1071..1905 853..19 4175 100 Minus
CG4257-PE 2265 Stat92E-RE 1449..2096 853..206 3240 100 Minus
CG4257-PC 2265 Stat92E-RC 1449..2096 853..206 3240 100 Minus
CG4257-PB 1887 Stat92E-RB 1071..1718 853..206 3240 100 Minus
CG4257-PE 2265 Stat92E-RE 2094..2262 187..19 845 100 Minus
CG4257-PC 2265 Stat92E-RC 2094..2262 187..19 845 100 Minus
CG4257-PB 1887 Stat92E-RB 1716..1884 187..19 845 100 Minus
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-13 12:40:08
Subject Length Description Subject Range Query Range Score Percent Strand
Stat92E-RM 4029 CG4257-RM 2124..2958 853..19 4175 100 Minus
Stat92E-RH 3830 CG4257-RH 1555..2389 853..19 4175 100 Minus
Stat92E-RG 3616 CG4257-RG 1711..2545 853..19 4175 100 Minus
Blast to na_all.dmel.RELEASE6 performed 2015-02-13 12:40:00
Subject Length Description Subject Range Query Range Score Percent Strand
3R 32079331 3R 20539657..20539916 406..665 1300 100 Plus
3R 32079331 3R 20539400..20539601 207..408 1010 100 Plus
3R 32079331 3R 20539975..20540162 666..853 940 100 Plus
3R 32079331 3R 20539221..20539358 71..208 690 100 Plus
3R 32079331 3R 20537412..20537463 19..70 260 100 Plus
Blast to na_te.dros performed on 2015-02-13 12:40:06 has no hits.

BO05316.3prime Sim4 Records

Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 02:20:26 Download gff for BO05316.3prime
Subject Subject Range Query Range Percent Splice Strand
CG4257-PF 1450..2286 16..852 99   Minus
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 00:41:25 Download gff for BO05316.3prime
Subject Subject Range Query Range Percent Splice Strand
CG4257-PG 1072..1908 16..852 99   Minus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-09-02 17:44:41 Download gff for BO05316.3prime
Subject Subject Range Query Range Percent Splice Strand
Stat92E-RG 1712..2552 12..852 99   Minus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-13 14:18:58 Download gff for BO05316.3prime
Subject Subject Range Query Range Percent Splice Strand
Stat92E-RG 1712..2552 12..852 99   Minus
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-13 14:18:58 Download gff for BO05316.3prime
Subject Subject Range Query Range Percent Splice Strand
3R 20539221..20539356 71..206 100 <- Plus
3R 20539400..20539600 207..407 100 <- Plus
3R 20539659..20539916 408..665 100 <- Plus
3R 20539975..20540161 666..852 100   Plus
3R 20537405..20537463 12..70 94 <- Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-09-02 17:44:41 Download gff for BO05316.3prime
Subject Subject Range Query Range Percent Splice Strand
arm_3R 16363127..16363185 12..70 94 <- Plus
arm_3R 16364943..16365078 71..206 100 <- Plus
arm_3R 16365122..16365322 207..407 100 <- Plus
arm_3R 16365381..16365638 408..665 100 <- Plus
arm_3R 16365697..16365883 666..852 100   Plus

BO05316.5prime Sequence

963 bp (857 high quality bases) assembled on 2005-12-02

> BO05316.5prime
GAAGTTATCAGTCGACATGAGCTTGTGGAAGCGCATCTCCAGCCATGTCG
ACTGCGAGCAGCGTATGGCGGCTTACTACGAGGAGAAGGGTATGCTCGAG
CTGCGCCTCTGCTTGGCACCCTGGATCGAAGACAGGATAATGTCCGAACA
AATAACGCCCAACACTACCGATCAGTTAGAGCGCGTGGCCCTAAAGTTCA
ACGAAGATCTGCAGCAAAAGCTTCTATCCACGCGCACCGCCAGCGACCAG
GCCCTCAAGTTCCGGGTGGTGGAGCTTTGCGCCCTCATCCAACGCATCTC
CGCCGTTGAGCTGTACACGCATCTGCGCAGCGGTCTACAAAAAGAGTTGC
AGTTGGTCACCGAGAAGAGCGTGGCTGCAACCGCAGGCCAATCAATGCCG
CTAAATCCCTACAACATGAACAACACGCCCATGGTTACCGGGTACATGGT
GGACCCCAGTGATCTTCTGGCGGTGTCCAACAGCTGCAATCCTCCAGTTG
TTCAGGGCATAGGACCTATCCACAATGTGCAAAATACAGGCATTGCCTCC
CCAGCCCTCGGTATGGTCACACCCAAGGTGGAGCTGTACGAGGTGCAACA
TCAGATCATGCAGTCCCTCAATGAGTTTGGCAACTGTGCCAATGCCTTGA
AGCTGCTTGCCCAAAACTACAGTTACATGCTAAACTCCACATCCTCGCCG
AACGCAGAAGCTGCCTACAGAAGTCTTATCGATGAAAAGGCGGCCATCGT
ACTCACAATGCGTCGCAGCTTTATGTACTACGAATCGCTGCACGAGATGG
TCATACACGAGCTCAAGAACTGGCGCCACCAACAAGCGCAAGCCGGAAAC
GGAGCTCCCTTTTATGAGGGCTCCCTGGATGATATCCAGCGCTGCTTTGA
GATGCTCGAGAGCTTTATCGCACACATGCTGGCTGCCGTTTAAGAGCTGA
TGCGCGTACGTCT

BO05316.5prime Blast Records

Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 12:20:01
Subject Length Description Subject Range Query Range Score Percent Strand
CG4257-PE 2265 Stat92E-RE 1..947 17..963 4660 99.6 Plus
CG4257-PF 2286 Stat92E-RF 1..947 17..963 4660 99.6 Plus
CG4257-PC 2265 Stat92E-RC 1..947 17..963 4660 99.6 Plus
CG4257-PB 1887 Stat92E-RB 1..569 395..963 2770 99.4 Plus
CG4257-PG 1908 Stat92E-RG 1..569 395..963 2770 99.4 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-11 15:51:00
Subject Length Description Subject Range Query Range Score Percent Strand
Stat92E-RM 4029 CG4257-RM 675..1622 16..963 4695 99.7 Plus
Stat92E-RK 4200 CG4257-RK 675..1622 16..963 4695 99.7 Plus
Stat92E-RJ 4023 CG4257-RJ 519..1466 16..963 4695 99.7 Plus
Blast to na_all.dmel.RELEASE6 performed 2015-02-11 15:50:56
Subject Length Description Subject Range Query Range Score Percent Strand
3R 32079331 3R 20540732..20541553 963..142 4065 99.6 Minus
3R 32079331 3R 20541678..20541805 143..16 640 100 Minus
Blast to na_te.dros performed on 2015-02-11 15:50:59 has no hits.

BO05316.5prime Sim4 Records

Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 02:20:27 Download gff for BO05316.5prime
Subject Subject Range Query Range Percent Splice Strand
CG4257-PF 1..947 17..963 99   Plus
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 00:41:27 Download gff for BO05316.5prime
Subject Subject Range Query Range Percent Splice Strand
CG4257-PC 1..947 17..963 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-25 19:35:58 Download gff for BO05316.5prime
Subject Subject Range Query Range Percent Splice Strand
Stat92E-RJ 515..1466 10..963 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-11 18:34:05 Download gff for BO05316.5prime
Subject Subject Range Query Range Percent Splice Strand
Stat92E-RJ 515..1466 10..963 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-11 18:34:05 Download gff for BO05316.5prime
Subject Subject Range Query Range Percent Splice Strand
3R 20540732..20541553 142..963 99 <- Minus
3R 20541680..20541809 10..141 97   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-25 19:35:58 Download gff for BO05316.5prime
Subject Subject Range Query Range Percent Splice Strand
arm_3R 16366454..16367275 142..963 99 <- Minus
arm_3R 16367402..16367531 10..141 97   Minus

BO05316.pep Sequence

Translation from 16 to 2317

> BO05316.pep
MSLWKRISSHVDCEQRMAAYYEEKGMLELRLCLAPWIEDRIMSEQITPNT
TDQLERVALKFNEDLQQKLLSTRTASDQALKFRVVELCALIQRISAVELY
THLRSGLQKELQLVTEKSVAATAGQSMPLNPYNMNNTPMVTGYMVDPSDL
LAVSNSCNPPVVQGIGPIHNVQNTGIASPALGMVTPKVELYEVQHQIMQS
LNEFGNCANALKLLAQNYSYMLNSTSSPNAEAAYRSLIDEKAAIVLTMRR
SFMYYESLHEMVIHELKNWRHQQAQAGNGAPFNEGSLDDIQRCFEMLESF
IAHMLAAVKELMRVRLVTEEPELTHLLEQVQNAQKNLVCSAFIVDKQPPQ
VMKTNTRFAASVRWLIGSQLGIHNNPPTVECIIMSEIQSQRFVTRNTQMD
NSSLSGQSSGEIQNASSTMEYQQNNHVFSASFRNMQLKKIKRAEKKGTES
VMDEKFALFFYTTTTVNDFQIRVWTLSLPVVVIVHGNQEPQSWATITWDN
AFAEIVRDPFMITDRVTWAQLSVALNIKFGSCTGRSLTIDNLDFLYEKLQ
REERSEYITWNQFCKEPMPDRSFTFWEWFFAIMKLTKDHMLGMWKAGCIM
GFINKTKAQTDLLRSVYGIGTFLLRFSDSELGGVTIAYVNENGLVTMLAP
WTARDFQVLNLADRIRDLDVLCWLHPSDRNASPVKRDVAFGEFYSKRQEP
EPLVLDPVTGYVKSTLHVHVCRNGENGSTSGTPHHAQESMQLGNGDFGMA
DFDTITNFENFASFLDH

BO05316.pep Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 01:15:11
Subject Length Description Subject Range Query Range Score Percent Strand
Stat92E-PM 761 CG4257-PM 1..761 1..761 3973 100 Plus
Stat92E-PF 761 CG4257-PF 1..761 1..761 3973 100 Plus
Stat92E-PC 754 CG4257-PC 1..754 1..761 3919 99.1 Plus
Stat92E-PE 754 CG4257-PE 1..754 1..761 3919 99.1 Plus
Stat92E-PK 818 CG4257-PK 1..744 1..744 3879 100 Plus