Clone BO05430 Report

Search the DGRC for BO05430

Clone and Library Details

Library:BO
Tissue Source:D. melanogaster
Created by:Joe Carlson
Date Registered:2004-06-03
Comments:Infusion clones with open reading frames
Original Plate Number:54
Well:30
Vector:pDNR-Dual
Associated Gene/TranscriptCG6769-RA
Protein status:BO05430.pep: validated full length
Sequenced Size:1261

Clone Sequence Records

BO05430.3prime Sequence

940 bp (883 high quality bases) assembled on 2005-12-02

> BO05430.3prime
ATGGTCTAGAAAGCTTGCGATCAGAACCTGTGCACGATAGTGCTTCTGCA
GCTTATTGGCCTTGCAGCCGAGCTTCATCTGCCACTTGGACTGGACGCGC
TTCATCAGATGAATGTCGCGTGCCTTGCGGGCGGCGGACAGCTGCTGCGT
TTGCGTCCAGCCCAGAGCCCGGTACTCGCTGAGCACGCGGTGCAGTTTGC
GGTCGGACTTCTTGATGACGACGGCGCGTTCCGGACGAAGACGCTGCTTG
TAGTAGCGAAGCAGGGAGCGATGACCAATGACCGCGCCTGAGGGCAGCAC
CAGCTGATACTCATCGCCATCGAGCAGATCCGGCACCACCTCTTCGTCAA
TGTCCATGCCCTCATTATTGTCCGGATAACTGCTGCTGTAGTCGTAGTAT
TCGGCATACTCGGCCAGCGCCACACCCTCGTGCAGCATCTGGCAGTGGCC
CTTGTCGATCATGTGTTTGCGCACGGCGTCCAGGGAATAGAAGGTCTTGC
CGCGATCGTTGCAGAACAGGCAGATGAAGTAGTTGGCCACCTTCTCGCCC
AGGTAGTACAGAAGGCCCTCGATGTCCGTGCAGTACTCGGTGTCCGGAAT
GAAGAACGAGTGCGCCACGGACATGTGCTTTAGGTTCTCCACCAGATCCT
CGCTGGCATGTGTGCAGAACAGGCAGTCGCGCTCGGTCAGCGGATTCTCG
GGTATCTTGTCCCACTCATCGGAATCCACCTCCTCCTCTTCAATGTCCTC
GAAATCATCGTCGTCCTCGTCGACCATCTCCTCGTCGTTATTGGCCTTGA
CCACCCGCTCCGCGAAGGCCAGTCGACCCTTGCCAGCGGCTGCGGCGGCC
AGGGCCGGATGGGGCCGCTGCTCCACGACGCTGCGCGTGCACACGGATGT
GGCGGTGCTGGCGCTGCCGCCGCTAGCTGTCATCTGCTCG

BO05430.3prime Blast Records

Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 12:21:11
Subject Length Description Subject Range Query Range Score Percent Strand
CG6769-PA 1230 CG6769-RA 306..1227 940..19 4610 100 Minus
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-11 15:52:37
Subject Length Description Subject Range Query Range Score Percent Strand
CG6769-RB 1543 CG6769-RB 468..1389 940..19 4610 100 Minus
CG6769-RA 1468 CG6769-RA 468..1389 940..19 4610 100 Minus
Blast to na_all.dmel.RELEASE6 performed 2015-02-11 15:52:32
Subject Length Description Subject Range Query Range Score Percent Strand
X 23542271 X 17861836..17862200 731..367 1825 100 Minus
X 23542271 X 17862274..17862621 366..19 1740 100 Minus
X 23542271 X 17861469..17861681 940..728 1065 100 Minus
Blast to na_te.dros performed on 2015-02-11 15:52:34 has no hits.

BO05430.3prime Sim4 Records

Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 02:21:54 Download gff for BO05430.3prime
Subject Subject Range Query Range Percent Splice Strand
CG6769-PA 306..1230 15..940 99   Minus
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 00:43:33 Download gff for BO05430.3prime
Subject Subject Range Query Range Percent Splice Strand
CG6769-PA 306..1230 15..940 99   Minus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-25 19:36:09 Download gff for BO05430.3prime
Subject Subject Range Query Range Percent Splice Strand
CG6769-RA 468..1392 15..940 99   Minus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-11 18:34:29 Download gff for BO05430.3prime
Subject Subject Range Query Range Percent Splice Strand
CG6769-RA 468..1392 15..940 99   Minus
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-11 18:34:29 Download gff for BO05430.3prime
Subject Subject Range Query Range Percent Splice Strand
X 17862274..17862624 15..366 99   Minus
X 17861469..17861679 730..940 100 -> Minus
X 17861838..17862200 367..729 100 -> Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-25 19:36:09 Download gff for BO05430.3prime
Subject Subject Range Query Range Percent Splice Strand
arm_X 17755502..17755712 730..940 100 -> Minus
arm_X 17755871..17756233 367..729 100 -> Minus
arm_X 17756307..17756657 15..366 99   Minus

BO05430.5prime Sequence

915 bp (833 high quality bases) assembled on 2005-11-29

> BO05430.5prime
GAAGTTATCAGTCGACATGTCGCACTTCACCTGCCTGAACTGCGATGCCC
GCTTCGCCAGCGCGGATGTGCAGCGGAATCACTACAAGACCGACTGGCAT
CGCTACAATCTGAAGCGCAGGGTGGCCCAGCTGCCGCCCGTTACGGCCGA
GGAGTTCCAGCAGCGCGTTCTTAGCGCCCGCAGCGCCACGGACGCGGCAC
TCGAGGAGCAGAACCTAAGTGTCTACTGCCACGCCTGCAGACGCCAATTC
GCCAGCCAGAAGGCGCACGACAACCACCTGAACAGCCGCAAGCACAAGGA
GCTGCTGGCCCGCTTCGAGCGCGAGCAGATGACAGCTAGCGGCGGCAGCG
CCAGCACCGCCACATCCGTGTGCACGCGCAGCGTCGTGGAGCAGCGGCCC
CATCCGGCCCTGGCCGCCGCAGCCGCTGGCAAGGGTCGACTGGCCTTCGC
GGAGCGGGTGGTCAAGGCCAATAACGACGAGGAGATGGTCGACGAGGACG
ACGATGATTTCGAGGACATTGAAGAGGAGGAGGTGGATTCCGATGAGTGG
GACAAGATACCCGAGAATCCGCTGACCGAGCGCGACTGCCTGTTCTGCAC
ACATGCCAGCGAGGATCTGGTGGAGAACCTAAAGCACATGTCCGTGGCGC
ACTCGTTCTTCATTCCGGACACCGAGTACTGCACGGACATCGAGGGCCTT
CTGTACTACCTGGGCGAGAAGGTGGCCAACTACTTCATCTGCCTGTTCTG
CAACGATCGCGGCAAGACCTTCTATTCCCTGGACGCCGTGCGCAAACACA
TGATCGACAAGGGCCACTGCCAGATGCTGCACGAGGGTGTGGCGCTGGCC
GAGTATGCCGAATACTACGACTACAGCAGCAGTTATCCGGACNATAATGA
GGGCATGGACATTGA

BO05430.5prime Blast Records

Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 12:21:11
Subject Length Description Subject Range Query Range Score Percent Strand
CG6769-PA 1230 CG6769-RA 1..899 17..915 4476 99.8 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-13 05:50:21
Subject Length Description Subject Range Query Range Score Percent Strand
CG6769-RB 1543 CG6769-RB 163..1061 17..915 4484 99.9 Plus
CG6769-RA 1468 CG6769-RA 163..1061 17..915 4484 99.9 Plus
Blast to na_all.dmel.RELEASE6 performed 2015-02-13 05:50:19
Subject Length Description Subject Range Query Range Score Percent Strand
X 23542271 X 17861164..17861681 17..534 2590 100 Plus
X 23542271 X 17861836..17862197 531..892 1810 100 Plus
Blast to na_te.dros performed on 2015-02-13 05:50:20 has no hits.

BO05430.5prime Sim4 Records

Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 02:21:55 Download gff for BO05430.5prime
Subject Subject Range Query Range Percent Splice Strand
CG6769-PA 1..898 17..914 99   Plus
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 00:43:34 Download gff for BO05430.5prime
Subject Subject Range Query Range Percent Splice Strand
CG6769-PA 1..898 17..914 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-09-01 17:56:50 Download gff for BO05430.5prime
Subject Subject Range Query Range Percent Splice Strand
CG6769-RA 152..1060 8..914 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-13 08:07:09 Download gff for BO05430.5prime
Subject Subject Range Query Range Percent Splice Strand
CG6769-RA 152..1060 8..914 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-13 08:07:09 Download gff for BO05430.5prime
Subject Subject Range Query Range Percent Splice Strand
X 17861153..17861679 8..532 99 -> Plus
X 17861838..17862200 533..895 99 -> Plus
X 17862274..17862292 896..914 100   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-09-01 17:56:50 Download gff for BO05430.5prime
Subject Subject Range Query Range Percent Splice Strand
arm_X 17755186..17755712 8..532 99 -> Plus
arm_X 17755871..17756233 533..895 99 -> Plus
arm_X 17756307..17756325 896..914 100   Plus

BO05430.complete Sequence

1261 bp (1261 high quality bases) assembled on 2005-09-12

GenBank Submission: FJ630033

> BO05430.complete
GAAGTTATCAGTCGACATGTCGCACTTCACCTGCCTGAACTGCGATGCCC
GCTTCGCCAGCGCGGATGTGCAGCGGAATCACTACAAGACCGACTGGCAT
CGCTACAATCTGAAGCGCAGGGTGGCCCAGCTGCCGCCCGTTACGGCCGA
GGAGTTCCAGCAGCGCGTTCTTAGCGCCCGCAGCGCCACGGACGCGGCAC
TCGAGGAGCAGAACCTAAGTGTCTACTGCCACGCCTGCAGACGCCAATTC
GCCAGCCAGAAGGCGCACGACAACCACCTGAACAGCCGCAAGCACAAGGA
GCTGCTGGCCCGCTTCGAGCGCGAGCAGATGACAGCTAGCGGCGGCAGCG
CCAGCACCGCCACATCCGTGTGCACGCGCAGCGTCGTGGAGCAGCGGCCC
CATCCGGCCCTGGCCGCCGCAGCCGCTGGCAAGGGTCGACTGGCCTTCGC
GGAGCGGGTGGTCAAGGCCAATAACGACGAGGAGATGGTCGACGAGGACG
ACGATGATTTCGAGGACATTGAAGAGGAGGAGGTGGATTCCGATGAGTGG
GACAAGATACCCGAGAATCCGCTGACCGAGCGCGACTGCCTGTTCTGCAC
ACATGCCAGCGAGGATCTGGTGGAGAACCTAAAGCACATGTCCGTGGCGC
ACTCGTTCTTCATTCCGGACACCGAGTACTGCACGGACATCGAGGGCCTT
CTGTACTACCTGGGCGAGAAGGTGGCCAACTACTTCATCTGCCTGTTCTG
CAACGATCGCGGCAAGACCTTCTATTCCCTGGACGCCGTGCGCAAACACA
TGATCGACAAGGGCCACTGCCAGATGCTGCACGAGGGTGTGGCGCTGGCC
GAGTATGCCGAATACTACGACTACAGCAGCAGTTATCCGGACAATAATGA
GGGCATGGACATTGACGAAGAGGTGGTGCCGGATCTGCTCGATGGCGATG
AGTATCAGCTGGTGCTGCCCTCAGGCGCGGTCATTGGTCATCGCTCCCTG
CTTCGCTACTACAAGCAGCGTCTTCGTCCGGAACGCGCCGTCGTCATCAA
GAAGTCCGACCGCAAACTGCACCGCGTGCTCAGCGAGTACCGGGCTCTGG
GCTGGACGCAAACGCAGCAGCTGTCCGCCGCCCGCAAGGCACGCGACATT
CATCTGATGAAGCGCGTCCAGTCCAAGTGGCAGATGAAGCTCGGCTGCAA
GGCCAATAAGCTGCAGAAGCACTATCGTGCACAGGTTCTGATCGCAAGCT
TTCTAGACCAT

BO05430.complete Blast Records

Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-27 06:42:28
Subject Length Description Subject Range Query Range Score Percent Strand
CG6769-RB 1230 CG6769-PB 1..1227 17..1243 6135 100 Plus
CG6769-RA 1230 CG6769-PA 1..1227 17..1243 6135 100 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 06:42:29
Subject Length Description Subject Range Query Range Score Percent Strand
CG6769-RB 1543 CG6769-RB 163..1389 17..1243 6135 100 Plus
CG6769-RA 1468 CG6769-RA 163..1389 17..1243 6135 100 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 06:42:26
Subject Length Description Subject Range Query Range Score Percent Strand
X 23542271 X 17861164..17861681 17..534 2590 100 Plus
X 23542271 X 17861836..17862200 531..895 1825 100 Plus
X 23542271 X 17862274..17862621 896..1243 1740 100 Plus
Blast to na_te.dros performed on 2014-11-27 06:42:27 has no hits.

BO05430.complete Sim4 Records

Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-21 22:37:46 Download gff for BO05430.complete
Subject Subject Range Query Range Percent Splice Strand
CG6769-RA 1..1230 17..1247 99   Plus
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-11 07:06:04 Download gff for BO05430.complete
Subject Subject Range Query Range Percent Splice Strand
CG6769-RA 226..1466 8..1247 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 04:51:25 Download gff for BO05430.complete
Subject Subject Range Query Range Percent Splice Strand
CG6769-RA 163..1389 17..1245 99   Plus
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 22:37:46 Download gff for BO05430.complete
Subject Subject Range Query Range Percent Splice Strand
CG6769-RA 226..1466 8..1247 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 07:52:13 Download gff for BO05430.complete
Subject Subject Range Query Range Percent Splice Strand
CG6769-RA 163..1389 17..1245 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 07:52:13 Download gff for BO05430.complete
Subject Subject Range Query Range Percent Splice Strand
X 17862274..17862621 896..1245 99   Plus
X 17861838..17862200 533..895 100 -> Plus
X 17861164..17861679 17..532 100 -> Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 04:51:25 Download gff for BO05430.complete
Subject Subject Range Query Range Percent Splice Strand
arm_X 17755871..17756233 533..895 100 -> Plus
arm_X 17756307..17756654 896..1245 99   Plus
arm_X 17755197..17755712 17..532 100 -> Plus

BO05430.pep Sequence

Translation from 16 to 1261

> BO05430.pep
MSHFTCLNCDARFASADVQRNHYKTDWHRYNLKRRVAQLPPVTAEEFQQR
VLSARSATDAALEEQNLSVYCHACRRQFASQKAHDNHLNSRKHKELLARF
EREQMTASGGSASTATSVCTRSVVEQRPHPALAAAAAGKGRLAFAERVVK
ANNDEEMVDEDDDDFEDIEEEEVDSDEWDKIPENPLTERDCLFCTHASED
LVENLKHMSVAHSFFIPDTEYCTDIEGLLYYLGEKVANYFICLFCNDRGK
TFYSLDAVRKHMIDKGHCQMLHEGVALAEYAEYYDYSSSYPDNNEGMDID
EEVVPDLLDGDEYQLVLPSGAVIGHRSLLRYYKQRLRPERAVVIKKSDRK
LHRVLSEYRALGWTQTQQLSAARKARDIHLMKRVQSKWQMKLGCKANKLQ
KHYRAQVLIASFLDH

BO05430.pep Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 18:36:22
Subject Length Description Subject Range Query Range Score Percent Strand
CG6769-PB 409 CG6769-PB 1..409 1..409 2163 100 Plus
CG6769-PA 409 CG6769-PA 1..409 1..409 2163 100 Plus