Clone Sequence Records
BO05443.3prime Sequence
855 bp (837 high quality bases) assembled on 2005-12-02
> BO05443.3prime
ATGGTCTAGAAAGCTTGCAGGTAAAAACTGCATGCTGGGAATAAAAGTCA
ATGCCTTGGAAGTGGGGCTTTTGGGATTCCCCAGATCTTTGGCGATTCCC
TGCACGCGGGCCACCACGTCACTGCGCTGGATATCGCCCCGGTCCAACAT
CCTTTTAAATAGAGTATACAATTGCCTGGCCGCCGAAACCTGTGACAAGG
CATGCAGCTCCACCAGCAGATTCTCGGAATATCCCTCGTACTTGCTCAGA
CTCGCCGCCTTAGCATCGCGCTTTAGCAGATCGTAAACCAGCAGGAAATC
CACATAGGGCTTAGTGGGAGGAACTCTCTTTTTGCCTGCGATCGAGGCGG
TGCTCCATCGATCCATCGCGGACTCAGAACCGAAAGCGGCCCTTCCGTAG
TTATCGTCGTAGAGGCGCAAAAAGTTATCCAGTGACTCCACATCGTTGGT
AAAGTCGTAGCGCTCGCTTTGAATATCACGGATCAAAGACAAAGGCAGGG
TATCAAAGTCGCTATCATCTTTGATTTCTGCAAATAGATCGTTGCCCTCA
AGGGACTTTTCCGGCGGCGCAGTTGGTGCAAAAATTGCCGGACGGTGCGG
CACAGTGGGTGGCGATGTGGGTCTCTCGGTTGTGGATGATCTCTTCGGCG
TTTCCCACCAACTTGGCGGCTGCCACCAGCCCATGCCACCAGATCCAGAC
GCACCTGCTCCAATCGGTCGCCTTGTGGTAGTGGTTCTCATCCTCGTGGG
CAACGGTGTGGATGGGCGCGGATTTGCAGTGGTGGATTCCATACCTTCTT
CATCCGCACTGAAAGGAGGCTCCACTGTTGTGCTTGATAGTGGCTCGTAC
TGCAG
BO05443.3prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 12:21:25
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG2723-PA | 978 | ImpE3-RA | 139..975 | 855..19 | 4185 | 100 | Minus |
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-11 02:39:59
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| ImpE3-RB | 1094 | CG2723-RB | 204..1040 | 855..19 | 4185 | 100 | Minus |
Blast to na_all.dmel.RELEASE6 performed 2015-02-11 02:39:55
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3R | 32079331 | 3R | 8028507..8029343 | 19..855 | 4185 | 100 | Plus |
Blast to na_te.dros performed on 2015-02-11 02:39:57 has no hits.
BO05443.3prime Sim4 Records
Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 02:22:13 Download gff for
BO05443.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| ImpE3-PA | 139..978 | 15..855 | 99 | | Minus |
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 00:44:01 Download gff for
BO05443.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG2723-PA | 139..978 | 15..855 | 99 | | Minus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-22 20:49:48 Download gff for
BO05443.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| ImpE3-RB | 204..1051 | 6..855 | 99 | | Minus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-11 05:48:23 Download gff for
BO05443.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| ImpE3-RB | 204..1051 | 6..855 | 99 | | Minus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-11 05:48:23 Download gff for
BO05443.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3R | 8028496..8029343 | 6..855 | 99 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-22 20:49:48 Download gff for
BO05443.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3R | 3854218..3855065 | 6..855 | 99 | | Plus |
BO05443.5prime Sequence
910 bp (819 high quality bases) assembled on 2005-12-02
> BO05443.5prime
GAAGTTATCAGTCGACATGCGCAGTGGGCTAACGGTTCGTCCAATGCTGG
TGGTGCTTCTAGTGGGTCACCTAGTGGATCCAGTGGCGCCGGCTAACCTA
CTGACTAGCTATCTGCCCGCCTCCATGCAGGCCTTGGCATACTATATTGA
CCTGCTGCAGTACGAGCCACTATCAAGCACAACAGTGGAGCCTCCTTTCA
GTGCGGATGAAGAAGGTATGGAATCCACCACTGCAAATCCGCGCCCATCC
ACACCGTTGCCCACGAGGATGAGAACCACTACCACAAGGCGACCGATTGG
AGCAGGTGCGTCTGGATCTGGTGGCATGGGCTGGTGGCAGCCGCCAAGTT
GGTGGGAAACGCCGAAGAGATCATCCACAACCGAGAGACCCACATCGCCA
CCCACTGTGCCGCACCGTCCGGCAATTTTTGCACCAACTGCGCCGCCGGA
AAAGTCCCTTGAGGGCAACGATCTATTTGCAGAAATCAAAGATGATAGCG
ACTTTGATACCCTGCCTTTGTCTTTGATCCGTGATATTCAAAGCGAGCGC
TACGACTTTACCAACGATGTGGAGTCACTGGATAACTTTTTGCGCCTCTA
CGACGATAACTACGGAAGGGCCGCTTTCGGTTCTGAGTCCGCGATGGATC
GATGGAGCACCGCCTCGATCGCAGGCAAAAAGAGAGTTCCTCCCACTAAG
CCCTATGTGGATTTCCTGCTGGTTTACGATCTGCTAAAGCGCGATGCTAA
GGCGGCGAGTCTGAGCAAGTACGAGGGATATTCCGAGAATCTGCTGGTGG
AGCTGCATGCCTTGTCACAGGTTTCGGCGGCCAGGCAATTGTATACTCTA
TTAAAAAGGATGTTGGACCGGGGCGATATCCAGCGCAGTGACGTGGTGGC
CCGCGTGCAG
BO05443.5prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 12:21:26
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG2723-PA | 978 | ImpE3-RA | 1..894 | 17..910 | 4445 | 99.8 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-11 04:52:27
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| ImpE3-RB | 1094 | CG2723-RB | 66..959 | 17..910 | 4455 | 99.9 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2015-02-11 04:52:24
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3R | 32079331 | 3R | 8028588..8029481 | 910..17 | 4455 | 99.9 | Minus |
Blast to na_te.dros performed on 2015-02-11 04:52:25 has no hits.
BO05443.5prime Sim4 Records
Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 02:22:14 Download gff for
BO05443.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| ImpE3-PA | 1..894 | 17..910 | 99 | | Plus |
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 00:44:02 Download gff for
BO05443.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG2723-PA | 1..894 | 17..910 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-23 06:14:57 Download gff for
BO05443.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| ImpE3-RB | 63..959 | 14..910 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-11 09:32:44 Download gff for
BO05443.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| ImpE3-RB | 63..959 | 14..910 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-11 09:32:44 Download gff for
BO05443.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3R | 8028588..8029484 | 14..910 | 99 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-23 06:14:57 Download gff for
BO05443.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3R | 3854310..3855206 | 14..910 | 99 | | Minus |
BO05443.complete Sequence
1009 bp (1009 high quality bases) assembled on 2005-09-12
GenBank Submission: FJ630039
> BO05443.complete
GAAGTTATCAGTCGACATGCGCAGTGGGCTAACGGTTCGTCCAATGCTGG
TGGTGCTTCTAGTGGGTCACCTAGTGGATCCAGTGGCGCCGGCTAACCTA
CTGACTAGCTATCTGCCCGCCTCCATGCAGGCCTTGGCATACTATATTGA
CCTGCTGCAGTACGAGCCACTATCAAGCACAACAGTGGAGCCTCCTTTCA
GTGCGGATGAAGAAGGTATGGAATCCACCACTGCAAATCCGCGCCCATCC
ACACCGTTGCCCACGAGGATGAGAACCACTACCACAAGGCGACCGATTGG
AGCAGGTGCGTCTGGATCTGGTGGCATGGGCTGGTGGCAGCCGCCAAGTT
GGTGGGAAACGCCGAAGAGATCATCCACAACCGAGAGACCCACATCGCCA
CCCACTGTGCCGCACCGTCCGGCAATTTTTGCACCAACTGCGCCGCCGGA
AAAGTCCCTTGAGGGCAACGATCTATTTGCAGAAATCAAAGATGATAGCG
ACTTTGATACCCTGCCTTTGTCTTTGATCCGTGATATTCAAAGCGAGCGC
TACGACTTTACCAACGATGTGGAGTCACTGGATAACTTTTTGCGCCTCTA
CGACGATAACTACGGAAGGGCCGCTTTCGGTTCTGAGTCCGCGATGGATC
GATGGAGCACCGCCTCGATCGCAGGCAAAAAGAGAGTTCCTCCCACTAAG
CCCTATGTGGATTTCCTGCTGGTTTACGATCTGCTAAAGCGCGATGCTAA
GGCGGCGAGTCTGAGCAAGTACGAGGGATATTCCGAGAATCTGCTGGTGG
AGCTGCATGCCTTGTCACAGGTTTCGGCGGCCAGGCAATTGTATACTCTA
TTTAAAAGGATGTTGGACCGGGGCGATATCCAGCGCAGTGACGTGGTGGC
CCGCGTGCAGGGAATCGCCAAAGATCTGGGGAATCCCAAAAGCCCCACTT
CCAAGGCATTGACTTTTATTCCCAGCATGCAGTTTTTACCTGCAAGCTTT
CTAGACCAT
BO05443.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-27 14:29:57
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| ImpE3-RB | 978 | CG2723-PB | 1..975 | 17..991 | 4875 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 14:29:58
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| ImpE3-RB | 1094 | CG2723-RB | 66..1040 | 17..991 | 4875 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 14:29:55
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3R | 32079331 | 3R | 8028507..8029481 | 991..17 | 4875 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-27 14:29:56 has no hits.
BO05443.complete Sim4 Records
Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-21 22:37:51 Download gff for
BO05443.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| ImpE3-RA | 1..978 | 17..995 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-11 07:06:10 Download gff for
BO05443.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| ImpE3-RA | 962..1950 | 14..1004 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 17:44:48 Download gff for
BO05443.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| ImpE3-RB | 66..1040 | 17..993 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 22:37:51 Download gff for
BO05443.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| ImpE3-RA | 962..1950 | 14..1004 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 15:13:00 Download gff for
BO05443.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| ImpE3-RB | 66..1040 | 17..993 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 15:13:00 Download gff for
BO05443.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3R | 8028505..8029481 | 17..993 | 99 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 17:44:48 Download gff for
BO05443.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3R | 3854227..3855203 | 17..993 | 99 | | Minus |
BO05443.pep Sequence
Translation from 16 to 1009
> BO05443.pep
MRSGLTVRPMLVVLLVGHLVDPVAPANLLTSYLPASMQALAYYIDLLQYE
PLSSTTVEPPFSADEEGMESTTANPRPSTPLPTRMRTTTTRRPIGAGASG
SGGMGWWQPPSWWETPKRSSTTERPTSPPTVPHRPAIFAPTAPPEKSLEG
NDLFAEIKDDSDFDTLPLSLIRDIQSERYDFTNDVESLDNFLRLYDDNYG
RAAFGSESAMDRWSTASIAGKKRVPPTKPYVDFLLVYDLLKRDAKAASLS
KYEGYSENLLVELHALSQVSAARQLYTLFKRMLDRGDIQRSDVVARVQGI
AKDLGNPKSPTSKALTFIPSMQFLPASFLDH
BO05443.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 18:36:17
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| ImpE3-PB | 325 | CG2723-PB | 1..325 | 1..325 | 1686 | 100 | Plus |
