Clone BO05444 Report

Search the DGRC for BO05444

Clone and Library Details

Library:BO
Tissue Source:D. melanogaster
Created by:Joe Carlson
Date Registered:2004-06-03
Comments:Infusion clones with open reading frames
Original Plate Number:54
Well:44
Vector:pDNR-Dual
Associated Gene/TranscriptCG10959-RA
Protein status:BO05444.pep: full length peptide match
Sequenced Size:1363

Clone Sequence Records

BO05444.3prime Sequence

919 bp (769 high quality bases) assembled on 2005-12-02

> BO05444.3prime
ATGGTCTAGAAAGCTTGCGTAGGTGAAAAGCATCTCGATGGGTTCCGCCT
CGGCACCCTCCGTCGCATTTACGGACGCCTGGAGCTTGTGCGCTCGCATA
TGAGCGGATAGACCTGCCGCCTGGGCATAGGCATTACCGCAGATCTTGCA
CTTGAACTTCTTGATGCCCAAATGCAGATGCTTGTGGTGATAGAGCGCCT
TCGGGCGGGAGAAGGCCGAATCACATTTGTCGCACTTGTAGGGCTTCTCG
GTGGAATGCATGGCCTGGTGCTCGTTGAGCAGCGACTTGGAGGCAAAGCG
GCGGGCACAGGTCTGGCACTGGAAGGGTTTCTCGCCCGTATGCGTGCGCC
GGTGGACGATCAACGCCTCCCGGTAGCGGGATCTATAGCCGCACAGCTCG
CACACGTAGTTCCGCTCCTCGCTGTGGACCCGCCGATGCGAGGTGAGGTT
GTGCTGGTTGACAAACGACTTGCCGCAGTTCTCGTGCTCACACTTGAATG
TCCTGGCGCCGGAGTGACCCTGCACATGGCGAAGAAGGGATCGCGAGCTT
TTGAACACCTTGTCGCATAGCTGGCAGGCGAACTCCGTGTGCTCCTTGCG
ACGATGCTGGGCCAATGCTCGGTCCACATCGAAGGTGGCTTTGCAGTCGA
CGCACTTGAAGGCCTGCGGAAACGGATGGCTCATCTTTAGGTGGGTGTTT
AGGTATTTCTGCGTCGTGTACCTCCTGTCGCAGTGTGGGCAGTTGTAGTC
CTTTGGTTGGCGCTGCTTCTTAAAAACAGACTGGTGCTCCTCCCCGTCCT
CATCCGGTTGATAGTCTTGCGGATTTTTCACGCCCAACAGAGCCTCCAGA
GCGCACCCCTCGTTGACGGATGCGGAGGAACTGTCATGATCCGGCTGCCA
CATCGTATCGATGGTCTCC

BO05444.3prime Blast Records

Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 12:21:27
Subject Length Description Subject Range Query Range Score Percent Strand
CG10959-PA 1332 CG10959-RA 429..1329 919..19 4480 99.8 Minus
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-13 15:34:22
Subject Length Description Subject Range Query Range Score Percent Strand
CG10959-RA 1836 CG10959-RA 544..1444 919..19 4490 99.9 Minus
CG10959-RB 1830 CG10959-RB 544..1438 919..19 4390 99.2 Minus
CG2129-RA 2017 CG2129-RA 1357..1462 215..110 200 80.4 Minus
Blast to na_all.dmel.RELEASE6 performed 2015-02-13 15:34:17
Subject Length Description Subject Range Query Range Score Percent Strand
X 23542271 X 8149543..8150294 770..19 3760 100 Minus
X 23542271 X 8149326..8149476 919..769 740 99.3 Minus
X 23542271 X 8147195..8147300 215..110 200 79.2 Minus
Blast to na_te.dros performed on 2015-02-13 15:34:19 has no hits.

BO05444.3prime Sim4 Records

Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 02:22:14 Download gff for BO05444.3prime
Subject Subject Range Query Range Percent Splice Strand
CG10959-PA 429..1332 16..919 99   Minus
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 00:44:04 Download gff for BO05444.3prime
Subject Subject Range Query Range Percent Splice Strand
CG10959-PA 429..1332 16..919 99   Minus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-09-03 11:04:11 Download gff for BO05444.3prime
Subject Subject Range Query Range Percent Splice Strand
CG10959-RA 544..1444 19..919 99   Minus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-13 17:02:57 Download gff for BO05444.3prime
Subject Subject Range Query Range Percent Splice Strand
CG10959-RA 544..1444 19..919 99   Minus
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-13 17:02:57 Download gff for BO05444.3prime
Subject Subject Range Query Range Percent Splice Strand
X 8149326..8149476 769..919 99 -> Minus
X 8149545..8150294 19..768 100   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-09-03 11:04:11 Download gff for BO05444.3prime
Subject Subject Range Query Range Percent Splice Strand
arm_X 8043359..8043509 769..919 99 -> Minus
arm_X 8043578..8044327 19..768 100   Minus

BO05444.5prime Sequence

915 bp (867 high quality bases) assembled on 2005-12-02

> BO05444.5prime
GAAGTTATCAGTCGACATGTTGAGACACTGCCTCGCCAACGTCGACTACG
TCCGCCTGCACGCCCAGCAGCAGTTGCGTCCCAAATGCGGCGAGATCTTC
TACGAACCGGAGGCGAATAGATTCCAACTGGTCTGCCTGCTCTGCGACAT
GAAGCACTTTGGATTCGAGGACTTCGCCCGCCATATCCGTAATGTGCACT
TCGACAAGCAGGGCCGACCGCTCACCAAGACGGTCACGGGACTGGGCAGA
CTAGCACGAGAGGAACAGGAGTTCCAAGGGGTCAGCGCAGAACCATTGGC
TGTGGACAGCTTCAAGAAAGAGTACCTGCCCAACGAGGATGTTCTGTCGG
AGGAGGAGGACGCGGAACAGGAGCTGGGACTGGAACAGGACGAGGGCAAT
CCACTACGCATCATGGTGCTCGGGGGTAAACAGTCCGTGGACGAGGAGAC
CATCGATACGATGTGGCAGCCGGATCATGACAGTTCCTCCGCATCCGTCA
ACGAGGGGTGCGCTCTGGAGGCTCTGTTGGGCGTGGAAAATCCGCAAGAC
TATCAACCGGATGAGGACGGGGAGGAGCACCAGTCTGTTTTTAAGAAGCA
GCGCCAACCAAAGGACTACAACTGCCCACACTGCGACAGGAGGTACACGA
CGCAGAAATACCTAAACACCCACCTAAAGATGAGCCATCCGTTTCCGCAG
GCCTTCAAGTGCGTCGACTGCAAAGCCACCTTCGATGTGGACCGAGCATT
GGCCCAGCATCGTCGCAAGGAGCACACGGAGTTCGCCTGCCAGCTATGCG
ACAAGGTGTTCAAAAGCTCGCGATCCCTTCTTCGCCATGTGCAGGGTCAC
TCCGGCGCCAGGACATTCAAGTGTGAGCACGAGAACTGCGGGCAGTCGTT
TGTCACCCAGCACAA

BO05444.5prime Blast Records

Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 12:21:28
Subject Length Description Subject Range Query Range Score Percent Strand
CG10959-PA 1332 CG10959-RA 1..899 17..915 4420 99.6 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-12 01:19:17
Subject Length Description Subject Range Query Range Score Percent Strand
CG10959-RA 1836 CG10959-RA 116..1014 17..915 4450 99.7 Plus
CG10959-RB 1830 CG10959-RB 116..1008 17..915 4350 99 Plus
Blast to na_all.dmel.RELEASE6 performed 2015-02-12 01:19:13
Subject Length Description Subject Range Query Range Score Percent Strand
X 23542271 X 8148898..8149476 17..595 2895 100 Plus
X 23542271 X 8149543..8149864 594..915 1565 99.1 Plus
Blast to na_te.dros performed on 2015-02-12 01:19:15 has no hits.

BO05444.5prime Sim4 Records

Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 02:22:15 Download gff for BO05444.5prime
Subject Subject Range Query Range Percent Splice Strand
CG10959-PA 1..897 17..913 99   Plus
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 00:44:06 Download gff for BO05444.5prime
Subject Subject Range Query Range Percent Splice Strand
CG10959-PA 1..897 17..913 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-28 11:41:04 Download gff for BO05444.5prime
Subject Subject Range Query Range Percent Splice Strand
CG10959-RA 108..1012 7..913 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-12 05:30:23 Download gff for BO05444.5prime
Subject Subject Range Query Range Percent Splice Strand
CG10959-RA 108..1012 7..913 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-12 05:30:23 Download gff for BO05444.5prime
Subject Subject Range Query Range Percent Splice Strand
X 8148890..8149476 7..595 99 -> Plus
X 8149545..8149862 596..913 99   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-28 11:41:04 Download gff for BO05444.5prime
Subject Subject Range Query Range Percent Splice Strand
arm_X 8042923..8043509 7..595 99 -> Plus
arm_X 8043578..8043895 596..913 99   Plus

BO05444.complete Sequence

1363 bp (1363 high quality bases) assembled on 2005-09-12

GenBank Submission: FJ630040

> BO05444.complete
GAAGTTATCAGTCGACATGTTGAGACACTGCCTCGCCAACGTCGACTACG
TCCGCCTGCACGCCCAGCAGCAGTTGCGTCCCAAATGCGGCGAGATCTTC
TACGAACCGGAGGCGAATAGATTCCAACTGGTCTGCCTGCTCTGCGACAT
GAAGCACTTTGGATTCGAGGACTTCGCCCGCCATATCCGTAATGTGCACT
TCGACAAGCAGGGCCGACCGCTCACCAAGACGGTCACGGGACTGGGCAGA
CTAGCACGAGAGGAACAGGAGTTCCAAGGGGTCAGCGCAGAACCATTGGC
TGTGGACAGCTTCAAGAAAGAGTACCTGCCCAACGAGGATGTTCTGTCGG
AGGAGGAGGACGCGGAACAGGAGCTGGGACTGGAACAGGACGAGGGCAAT
CCACTACGCATCATGGTGCTCGGGGGTAAACAGTCCGTGGACGAGGAGAC
CATCGATACGATGTGGCAGCCGGATCATGACAGTTCCTCCGCATCCGTCA
ACGAGGGGTGCGCTCTGGAGGCTCTGTTGGGCGTGGAAAATCCGCAAGAC
TATCAACCGGATGAGGACGGGGAGGAGCACCAGTCTGTTTTTAAGAAGCA
GCGCCAACCAAAGGACTACAACTGCCCACACTGCGACAGGAGGTACACGA
CGCAGAAATACCTAAACACCCACCTAAAGATGAGCCATCCGTTTCCGCAG
GCCTTCAAGTGCGTCGACTGCAAAGCCACCTTCGATGTGGACCGAGCATT
GGCCCAGCATCGTCGCAAGGAGCACACGGAGTTCGCCTGCCAGCTATGCG
ACAAGGTGTTCAAAAGCTCGCGATCCCTTCTTCGCCATGTGCAGGGTCAC
TCCGGCGCCAGGACATTCAAGTGTGAGCACGAGAACTGCGGCAAGTCGTT
TGTCAACCAGCACAACCTCACCTCGCATCGGCGGGTCCACAGCGAGGAGC
GGAACTACGTGTGCGAGCTGTGCGGCTATAGATCCCGCTACCGGGAGGCG
TTGATCGTCCACCGGCGCACGCATACGGGCGAGAAACCCTTCCAGTGCCA
GACCTGTGCCCGCCGCTTTGCCTCCAAGTCGCTGCTCAACGAGCACCAGG
CCATGCATTCCACCGAGAAGCCCTACAAGTGCGACAAATGTGATTCGGCC
TTCTCCCGCCCGAAGGCGCTCTATCACCACAAGCATCTGCATTTGGGCAT
CAAGAAGTTCAAGTGCAAGATCTGCGGTAATGCCTATGCCCAGGCGGCAG
GTCTATCCGCTCATATGCGAGCGCACAAGCTCCAGGCGTCCGTAAATGCG
ACGGAGGGTGCCGAGGCGGAACCCATCGAGATGCTTTTCACCTACGCAAG
CTTTCTAGACCAT

BO05444.complete Blast Records

Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-26 15:41:11
Subject Length Description Subject Range Query Range Score Percent Strand
CG10959-RA 1332 CG10959-PA 1..1329 17..1345 6645 100 Plus
CG10959-RB 1326 CG10959-PB 1..1323 17..1345 6520 99.5 Plus
CG2129-RA 1398 CG2129-PA 1247..1352 1149..1254 200 79.2 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-26 15:41:13
Subject Length Description Subject Range Query Range Score Percent Strand
CG10959-RA 1836 CG10959-RA 116..1444 17..1345 6645 100 Plus
CG10959-RB 1830 CG10959-RB 116..1438 17..1345 6520 99.5 Plus
CG2129-RA 2017 CG2129-RA 1357..1462 1149..1254 200 79.2 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-26 15:41:09
Subject Length Description Subject Range Query Range Score Percent Strand
X 23542271 X 8149543..8150294 594..1345 3760 100 Plus
X 23542271 X 8148898..8149476 17..595 2895 100 Plus
X 23542271 X 8147195..8147300 1149..1254 200 79.2 Plus
Blast to na_te.dros performed on 2014-11-26 15:41:10 has no hits.

BO05444.complete Sim4 Records

Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-21 22:37:37 Download gff for BO05444.complete
Subject Subject Range Query Range Percent Splice Strand
CG10959-RA 1..1332 17..1348 99   Plus
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-11 07:05:52 Download gff for BO05444.complete
Subject Subject Range Query Range Percent Splice Strand
CG10959-RA 21..1357 7..1345 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 01:41:55 Download gff for BO05444.complete
Subject Subject Range Query Range Percent Splice Strand
CG10959-RA 121..1444 22..1347 99   Plus
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 22:37:37 Download gff for BO05444.complete
Subject Subject Range Query Range Percent Splice Strand
CG10959-RA 21..1357 7..1345 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 17:01:27 Download gff for BO05444.complete
Subject Subject Range Query Range Percent Splice Strand
CG10959-RA 121..1444 22..1347 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-26 17:01:27 Download gff for BO05444.complete
Subject Subject Range Query Range Percent Splice Strand
X 8148903..8149476 22..595 100 -> Plus
X 8149545..8150294 596..1347 99   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 01:41:55 Download gff for BO05444.complete
Subject Subject Range Query Range Percent Splice Strand
arm_X 8042936..8043509 22..595 100 -> Plus
arm_X 8043578..8044327 596..1347 99   Plus

BO05444.pep Sequence

Translation from 16 to 1363

> BO05444.pep
MLRHCLANVDYVRLHAQQQLRPKCGEIFYEPEANRFQLVCLLCDMKHFGF
EDFARHIRNVHFDKQGRPLTKTVTGLGRLAREEQEFQGVSAEPLAVDSFK
KEYLPNEDVLSEEEDAEQELGLEQDEGNPLRIMVLGGKQSVDEETIDTMW
QPDHDSSSASVNEGCALEALLGVENPQDYQPDEDGEEHQSVFKKQRQPKD
YNCPHCDRRYTTQKYLNTHLKMSHPFPQAFKCVDCKATFDVDRALAQHRR
KEHTEFACQLCDKVFKSSRSLLRHVQGHSGARTFKCEHENCGKSFVNQHN
LTSHRRVHSEERNYVCELCGYRSRYREALIVHRRTHTGEKPFQCQTCARR
FASKSLLNEHQAMHSTEKPYKCDKCDSAFSRPKALYHHKHLHLGIKKFKC
KICGNAYAQAAGLSAHMRAHKLQASVNATEGAEAEPIEMLFTYASFLDH

BO05444.pep Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 18:36:35
Subject Length Description Subject Range Query Range Score Percent Strand
CG10959-PA 443 CG10959-PA 1..443 1..443 2408 100 Plus
CG10959-PB 441 CG10959-PB 1..441 1..443 2385 99.5 Plus
CG2129-PA 465 CG2129-PA 17..459 23..421 668 34.2 Plus
CG18262-PA 469 CG18262-PA 18..411 23..420 518 31.2 Plus
Meics-PB 571 CG8474-PB 170..478 89..420 406 31.5 Plus
CG2129-PA 465 CG2129-PA 296..462 203..368 212 30.4 Plus